RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 CXCL17Q6UXB2 119 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 DEFB128Q7Z7B8 93 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 CERS3Q8IU89 383 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 KIAA2013Q8IYS2 634 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 CRACR2BQ8N4Y2 399 aaPredicted RBP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 TSPYL6Q8N831 410 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 FBXO22Q8NEZ5 403 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 SP7Q8TDD2 431 aaPredicted RBP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 GDPD5Q8WTR4 605 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 RUBCNQ92622 972 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 NSUN4Q96CB9 384 aaKnown RBP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 DDX11Q96FC9 970 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 SCLYQ96I15 445 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 CHAMP1Q96JM3 812 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 MSLNLQ96KJ4 702 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 MMP19Q99542 508 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 HAUS7Q99871 368 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 PHF7Q9BWX1 381 aaPredicted RBP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 TRIM34Q9BYJ4 488 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 FTOQ9C0B1 505 aaKnown RBP eCLIP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 AP5M1Q9H0R1 490 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 LMAN2LQ9H0V9 348 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 EHD4Q9H223 541 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 CABP5Q9NP86 173 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 CLDND1Q9NY35 253 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 CEP126Q9P2H0 1117 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 ABCF2Q9UG63 623 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 CD207Q9UJ71 328 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 GNEQ9Y223 722 aaKnown RBP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 PCDHGC5Q9Y5F6 944 aa2.94□□□□□ -1.94
CPNE3-211ENST00000621526 SETXQ7Z333 2677 aaKnown RBP2.94□□□□□ -1.94
CPNE3-211ENST00000621526 TECTAO75443 2155 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 MGAMO43451 1857 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 C5orf67F2Z3F1 127 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 ATP2A1O14983 1001 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 DYNC1LI2O43237 492 aaPredicted RBP2.93□□□□□ -1.94
CPNE3-211ENST00000621526 KDM4AO75164 1064 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 CIAO1O76071 339 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 GDF11O95390 407 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 HLA-DOAP06340 250 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 CYP2C9P11712 490 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 WDR5P61964 334 aaKnown RBP2.93□□□□□ -1.94
CPNE3-211ENST00000621526 DLX2Q07687 328 aaPredicted RBP2.93□□□□□ -1.94
CPNE3-211ENST00000621526 PLS1Q14651 629 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 GPNMBQ14956 572 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 TMEM132BQ14DG7 1078 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 FSCN1Q16658 493 aaKnown RBP2.93□□□□□ -1.94
CPNE3-211ENST00000621526 RSPO4Q2I0M5 234 aaPredicted RBP2.93□□□□□ -1.94
CPNE3-211ENST00000621526 ABCB5Q2M3G0 1257 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 CERKLQ49MI3 558 aaPredicted RBP2.93□□□□□ -1.94
CPNE3-211ENST00000621526 CCDC102BQ68D86 513 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 NFRKBQ6P4R8 1299 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 CNKSR3Q6P9H4 555 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 TMED8Q6PL24 325 aaPredicted RBP2.93□□□□□ -1.94
CPNE3-211ENST00000621526 EP400NLQ6ZTU2 488 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 ATG9AQ7Z3C6 839 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 SPRED2Q7Z698 418 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 TTC6Q86TZ1 520 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 RPAINQ86UA6 219 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 TMEM192Q8IY95 271 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 TEX11Q8IYF3 940 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 TMEM105Q8N8V8 129 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 CAGE1Q8TC20 777 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 KCNG4Q8TDN1 519 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 ACER1Q8TDN7 264 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 AFAP1L1Q8TED9 768 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 ZNF384Q8TF68 577 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 PPP2R3CQ969Q6 453 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 CDCA7LQ96GN5 454 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 FEZ1Q99689 392 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 RTP3Q9BQQ7 232 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 RTKNQ9BST9 563 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 KATNBL1Q9H079 304 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 DNAJC18Q9H819 358 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 POLR3EQ9NVU0 708 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.93□□□□□ -1.94
CPNE3-211ENST00000621526 SERPINB13Q9UIV8 391 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 PALD1Q9ULE6 856 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 RLFQ13129 1914 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 LTBP2Q14767 1821 aa2.93□□□□□ -1.94
CPNE3-211ENST00000621526 OTOFQ9HC10 1997 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 FAM208BQ5VWN6 2430 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 A0A1W2PRG0 241 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 FSD2A1L4K1 749 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 ASB14A6NK59 587 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 USP17L12C9JPN9 530 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 USP17L21D6R901 530 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 VWA5AO00534 786 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 VAMP4O75379 141 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 FLOT1O75955 427 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 NBPF7P0C2Y1 421 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 SELPP16109 830 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 SMPD1P17405 629 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 GUCY1A2P33402 732 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 BMPR1AP36894 532 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 IL15P40933 162 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 PHKA1P46020 1223 aa2.92□□□□□ -1.94
CPNE3-211ENST00000621526 RFX5P48382 616 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-211ENST00000621526 RRP1P56182 461 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms