RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 WDR46O15213 610 aaKnown RBP5.71□□□□□ -1.5
MATR3-228ENST00000620916 ATMINO43313 823 aaPredicted RBP5.71□□□□□ -1.5
MATR3-228ENST00000620916 PDGFRBP09619 1106 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 CNGA1P29973 690 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 RASSF7Q02833 373 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 PPIDQ08752 370 aaKnown RBP5.71□□□□□ -1.5
MATR3-228ENST00000620916 TMEM62Q0P6H9 643 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 TUBB8Q3ZCM7 444 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 NAA16Q6N069 864 aaPredicted RBP5.71□□□□□ -1.5
MATR3-228ENST00000620916 BZW1Q7L1Q6 419 aaKnown RBP5.71□□□□□ -1.5
MATR3-228ENST00000620916 SH3TC2Q8TF17 1288 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 TSC22D3Q99576 134 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 FUCA2Q9BTY2 467 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 DDX21Q9NR30 783 aaKnown RBP eCLIP5.71□□□□□ -1.5
MATR3-228ENST00000620916 ZNHIT6Q9NWK9 470 aaKnown RBP5.71□□□□□ -1.5
MATR3-228ENST00000620916 MAP3K20Q9NYL2 800 aaKnown RBP5.71□□□□□ -1.5
MATR3-228ENST00000620916 TMCC3Q9ULS5 477 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 BZW2Q9Y6E2 419 aaKnown RBP5.71□□□□□ -1.5
MATR3-228ENST00000620916 SQORQ9Y6N5 450 aa5.71□□□□□ -1.5
MATR3-228ENST00000620916 CCDC151A5D8V7 595 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 TADA3O75528 432 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 TMCC1O94876 653 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 NPTXRO95502 500 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 PARP1P09874 1014 aaKnown RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 IL2RBP14784 551 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 ATP5JP18859 108 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 GBP2P32456 591 aaPredicted RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 S100A5P33763 92 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 CA8P35219 290 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 GNAQP50148 359 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 BLMHQ13867 455 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 INAQ16352 499 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 CCDC14Q49A88 953 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 TMEM87AQ8NBN3 555 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 ACMSDQ8TDX5 336 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 CENPTQ96BT3 561 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 CDC5LQ99459 802 aaKnown RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 CGREF1Q99674 301 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 HESX1Q9UBX0 185 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 ZNF148Q9UQR1 794 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 SCINQ9Y6U3 715 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 IVNS1ABPQ9Y6Y0 642 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 NFAT5O94916 1531 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 UBR2Q8IWV8 1755 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 COL3A1P02461 1466 aaPredicted RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 TTC41PQ6P2S7 1318 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 KDM3BQ7LBC6 1761 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 PALM3A6NDB9 673 aaPredicted RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 C19orf67A6NJJ6 358 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 BIRC5O15392 142 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 USP17L8P0C7I0 530 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 SKIP12755 728 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 PLCG2P16885 1265 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 IL4RP24394 825 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 SCNN1AP37088 669 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 CCT6AP40227 531 aaKnown RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 NUCB1Q02818 461 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 CBX3Q13185 183 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 SAFB2Q14151 953 aaKnown RBP eCLIP5.7□□□□□ -1.5
MATR3-228ENST00000620916 CCDC183Q5T5S1 534 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 ZSCAN25Q6NSZ9 544 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 CRELD2Q6UXH1 353 aaPredicted RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 ZNF662Q6ZS27 426 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 NEK10Q6ZWH5 1172 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 B4GALNT4Q76KP1 1039 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 SESTD1Q86VW0 696 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 TRMT2AQ8IZ69 625 aaKnown RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 SAMD14Q8IZD0 417 aaPredicted RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 PTCD2Q8WV60 388 aaKnown RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 HVCN1Q96D96 273 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 SPAG5Q96R06 1193 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 LRRC27Q9C0I9 530 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 IL20Q9NYY1 176 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 TFCP2L1Q9NZI6 479 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 TFIP11Q9UBB9 837 aaKnown RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 DNAI1Q9UI46 699 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 DAAM1Q9Y4D1 1078 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 POTEFA5A3E0 1075 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 MGEA5O60502 916 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 TBCAO75347 108 aaKnown RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 LUC7L3O95232 432 aaKnown RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 SH3BGRP55822 239 aaPredicted RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 TUBA1BP68363 451 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 TUBB4BP68371 445 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 WTAPQ15007 396 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 BCL2A1Q16548 175 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 TRIM71Q2Q1W2 868 aaKnown RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 CCDC144BQ3MJ40 725 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 DUSP27Q5VZP5 1158 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 CCBE1Q6UXH8 406 aaPredicted RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 TUBA1AQ71U36 451 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 MAATS1Q7Z4T9 603 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 BPHLQ86WA6 291 aaPredicted RBP5.7□□□□□ -1.5
MATR3-228ENST00000620916 CCDC144CPQ8IYA2 1237 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 NLGN2Q8NFZ4 835 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 UBXN4Q92575 508 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 VMP1Q96GC9 406 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 SNX27Q96L92 541 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 TCHPQ9BT92 498 aa5.7□□□□□ -1.5
MATR3-228ENST00000620916 MOV10L1Q9BXT6 1211 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms