RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 KLRF2D3W0D1 207 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 COBLO75128 1261 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 DDAH1O94760 285 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 SLC25A27O95847 323 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 FDX1P10109 184 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 RPS6KB1P23443 525 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 ADORA2AP29274 412 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 TRIM32Q13049 653 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 MUM1L1Q5H9M0 696 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 BLOC1S2Q6QNY1 142 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 CATIPQ7Z7H3 387 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 NUP133Q8WUM0 1156 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 SOCS4Q8WXH5 440 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 TRIB2Q92519 343 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 ARMC5Q96C12 935 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 MROH8Q9H579 483 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 JMJD4Q9H9V9 463 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 ZSWIM6Q9HCJ5 1215 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 HOMER2Q9NSB8 354 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 FLRT1Q9NZU1 646 aa12.6□□□□□ -0.39
TARDBP-223ENST00000620632 MKI67P46013 3256 aaKnown RBP12.6□□□□□ -0.39
TARDBP-223ENST00000620632 CCDC69A6NI79 296 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 SLC15A5A6NIM6 579 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 ADCY3O60266 1144 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 ICAM1P05362 532 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 HMGB1P09429 215 aaKnown RBP12.59□□□□□ -0.39
TARDBP-223ENST00000620632 GRK4P32298 578 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 CDC37Q16543 378 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-223ENST00000620632 SLC9C1Q4G0N8 1177 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 APOA5Q6Q788 366 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 NFXL1Q6ZNB6 911 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 Q6ZUG5 572 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.59□□□□□ -0.39
TARDBP-223ENST00000620632 CCDC144CPQ8IYA2 1237 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 MTMR8Q96EF0 704 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 ZNF333Q96JL9 665 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 MMP19Q99542 508 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 UPF3BQ9BZI7 483 aaKnown RBP12.59□□□□□ -0.39
TARDBP-223ENST00000620632 CWC22Q9HCG8 908 aaKnown RBP12.59□□□□□ -0.39
TARDBP-223ENST00000620632 CCPG1Q9ULG6 757 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 CTDP1Q9Y5B0 961 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-223ENST00000620632 IVNS1ABPQ9Y6Y0 642 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 KIAA0100Q14667 2235 aaKnown RBP12.59□□□□□ -0.39
TARDBP-223ENST00000620632 LRRC37A2A6NM11 1700 aa12.59□□□□□ -0.39
TARDBP-223ENST00000620632 PPP1R11O60927 126 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-223ENST00000620632 PLEKHA8P1O95397 391 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 MYCP01106 439 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-223ENST00000620632 IGHA2P01877 340 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 PGK2P07205 417 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 HOXC6P09630 235 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
TARDBP-223ENST00000620632 ALAS1P13196 640 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 RGS2P41220 211 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 APOBRQ0VD83 1088 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 TOB2Q14106 344 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-223ENST00000620632 MTFR1Q15390 333 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 QRICH1Q2TAL8 776 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 RUFY3Q7L099 469 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 MICU3Q86XE3 530 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 ABRAQ8N0Z2 381 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 CMTR1Q8N1G2 835 aaKnown RBP12.58□□□□□ -0.4
TARDBP-223ENST00000620632 TMTC2Q8N394 836 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 PXYLP1Q8TE99 480 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 BRF1Q92994 677 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 IL17RAQ96F46 866 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 FGD4Q96M96 766 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 MAP3K14Q99558 947 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 APBA2Q99767 749 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 TM6SF1Q9BZW5 370 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 RIOX1Q9H6W3 641 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 VAT1LQ9HCJ6 419 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 RNF146Q9NTX7 359 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 SLC12A7Q9Y666 1083 aa12.58□□□□□ -0.4
TARDBP-223ENST00000620632 DNAJC25-GNG10A0A024R161 153 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 KLF18A0A0U1RQI7 1052 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 NFIBO00712 420 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 STRNO43815 780 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 INHAP05111 366 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 FCER1AP12319 257 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 PSMA5P28066 241 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 COPB2P35606 906 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 USH1GQ495M9 461 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 FBXL16Q8N461 479 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 SRBD1Q8N5C6 995 aaKnown RBP12.57□□□□□ -0.4
TARDBP-223ENST00000620632 CHST13Q8NET6 341 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 CLEC4DQ8WXI8 215 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 TRERF1Q96PN7 1200 aa12.57□□□□□ -0.4
TARDBP-223ENST00000620632 LARP6Q9BRS8 491 aaKnown RBP12.57□□□□□ -0.4
TARDBP-223ENST00000620632 A1CFQ9NQ94 594 aaKnown RBP12.57□□□□□ -0.4
TARDBP-223ENST00000620632 FAM217BQ9NTX9 383 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-223ENST00000620632 CCDC85CA6NKD9 419 aa12.56□□□□□ -0.4
TARDBP-223ENST00000620632 DHX16O60231 1041 aaKnown RBP12.56□□□□□ -0.4
TARDBP-223ENST00000620632 CDC27P30260 824 aa12.56□□□□□ -0.4
TARDBP-223ENST00000620632 ANAPC15P60006 121 aa12.56□□□□□ -0.4
TARDBP-223ENST00000620632 ZNF792Q3KQV3 632 aa12.56□□□□□ -0.4
TARDBP-223ENST00000620632 TKFCQ3LXA3 575 aa12.56□□□□□ -0.4
TARDBP-223ENST00000620632 DPP9Q86TI2 863 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms