RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 SAR1BQ9Y6B6 198 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 CCNT1O60563 726 aaKnown RBP17.98■□□□□ 0.47
DKC1-213ENST00000620277 SSBP05455 408 aaKnown RBP eCLIP17.98■□□□□ 0.47
DKC1-213ENST00000620277 WDR59Q6PJI9 974 aa17.98■□□□□ 0.47
DKC1-213ENST00000620277 PROCA1Q8NCQ7 364 aaPredicted RBP17.98■□□□□ 0.47
DKC1-213ENST00000620277 PNMA1Q8ND90 353 aa17.98■□□□□ 0.47
DKC1-213ENST00000620277 TANGO6Q9C0B7 1094 aa17.98■□□□□ 0.47
DKC1-213ENST00000620277 TBC1D7Q9P0N9 293 aa17.98■□□□□ 0.47
DKC1-213ENST00000620277 MINPP1Q9UNW1 487 aa17.98■□□□□ 0.47
DKC1-213ENST00000620277 ACTN2P35609 894 aa17.98■□□□□ 0.47
DKC1-213ENST00000620277 DNAAF5Q86Y56 855 aa17.98■□□□□ 0.47
DKC1-213ENST00000620277 DZIP1Q86YF9 867 aaKnown RBP17.98■□□□□ 0.47
DKC1-213ENST00000620277 GOLGA6L1Q8N7Z2 621 aa17.98■□□□□ 0.47
DKC1-213ENST00000620277 LOC102724428A0A0B4J2F2 783 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 BUB1O43683 1085 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 TXKP42681 527 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 SIK1P57059 783 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 MAPKAPK5Q8IW41 473 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 RRP15Q9Y3B9 282 aaKnown RBP17.97■□□□□ 0.47
DKC1-213ENST00000620277 MYH7P12883 1935 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 ATRNO75882 1429 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 PIP4K2BP78356 416 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 NAALADL2Q58DX5 795 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 TNFRSF25Q93038 417 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 NOC4LQ9BVI4 516 aaKnown RBP17.97■□□□□ 0.47
DKC1-213ENST00000620277 DEF6Q9H4E7 631 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 DISC1Q9NRI5 854 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 BIN2Q9UBW5 565 aaPredicted RBP17.97■□□□□ 0.47
DKC1-213ENST00000620277 LIMA1Q9UHB6 759 aaKnown RBP17.97■□□□□ 0.47
DKC1-213ENST00000620277 COL18A1P39060 1754 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 PLCG1P19174 1290 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 APBA1Q02410 837 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 ANKRD40Q6AI12 368 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 C2CD5Q86YS7 1000 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 TGFBRAP1Q8WUH2 860 aa17.97■□□□□ 0.47
DKC1-213ENST00000620277 NHEJ1Q9H9Q4 299 aaPredicted RBP17.97■□□□□ 0.47
DKC1-213ENST00000620277 SRP68Q9UHB9 627 aaKnown RBP17.97■□□□□ 0.47
DKC1-213ENST00000620277 MOCS3O95396 460 aa17.96■□□□□ 0.47
DKC1-213ENST00000620277 GGCXP38435 758 aa17.96■□□□□ 0.47
DKC1-213ENST00000620277 TXNRD1Q16881 649 aa17.96■□□□□ 0.47
DKC1-213ENST00000620277 USP17L2Q6R6M4 530 aa17.96■□□□□ 0.47
DKC1-213ENST00000620277 NUP188Q5SRE5 1749 aa17.96■□□□□ 0.47
DKC1-213ENST00000620277 PSMA7O14818 248 aa17.96■□□□□ 0.47
DKC1-213ENST00000620277 CAMTA2O94983 1202 aa17.96■□□□□ 0.47
DKC1-213ENST00000620277 GRIK5Q16478 980 aa17.96■□□□□ 0.47
DKC1-213ENST00000620277 CRACR2AQ9BSW2 395 aa17.96■□□□□ 0.47
DKC1-213ENST00000620277 NLRC4Q9NPP4 1024 aa17.96■□□□□ 0.47
DKC1-213ENST00000620277 ZNHIT6Q9NWK9 470 aaKnown RBP17.96■□□□□ 0.47
DKC1-213ENST00000620277 ALS2Q96Q42 1657 aa17.96■□□□□ 0.46
DKC1-213ENST00000620277 EPHB6O15197 1021 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 ATP8B1O43520 1251 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 NTSR2O95665 410 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 CLEC10AQ8IUN9 316 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 EXOC4Q96A65 974 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 RRP36Q96EU6 259 aaKnown RBP17.95■□□□□ 0.46
DKC1-213ENST00000620277 RBM28Q9NW13 759 aaKnown RBP17.95■□□□□ 0.46
DKC1-213ENST00000620277 TAF1P21675 1872 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 TSPY3P0CV98 308 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 TSPY8P0CW00 308 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 CACNB1Q02641 598 aaPredicted RBP17.95■□□□□ 0.46
DKC1-213ENST00000620277 GLIS3Q8NEA6 775 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 COG1Q8WTW3 980 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 NSUN4Q96CB9 384 aaKnown RBP17.95■□□□□ 0.46
DKC1-213ENST00000620277 CNOT6LQ96LI5 555 aaKnown RBP17.95■□□□□ 0.46
DKC1-213ENST00000620277 CRNKL1Q9BZJ0 848 aaKnown RBP17.95■□□□□ 0.46
DKC1-213ENST00000620277 TMEM260Q9NX78 707 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 ERVV-1B6SEH8 477 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 PFKFB3Q16875 520 aaPredicted RBP17.95■□□□□ 0.46
DKC1-213ENST00000620277 KCTD16Q68DU8 428 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 PTF1AQ7RTS3 328 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 CCDC42Q96M95 316 aa17.95■□□□□ 0.46
DKC1-213ENST00000620277 ESYT3A0FGR9 886 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 NAPAP54920 295 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 WHAMMP3Q1A5X7 153 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 SND1Q7KZF4 910 aaKnown RBP eCLIP17.94■□□□□ 0.46
DKC1-213ENST00000620277 ADSSL1Q8N142 457 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 ZHX3Q9H4I2 956 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 IL17RBQ9NRM6 502 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 PKD1L3Q7Z443 1732 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 TNS2Q63HR2 1409 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 STIM1Q13586 685 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 RCSD1Q6JBY9 416 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 NFRKBQ6P4R8 1299 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 GOLGA5Q8TBA6 731 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 SMARCC1Q92922 1105 aaPredicted RBP17.94■□□□□ 0.46
DKC1-213ENST00000620277 RASSF4Q9H2L5 321 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 EXOC1Q9NV70 894 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 ANKIB1Q9P2G1 1089 aa17.94■□□□□ 0.46
DKC1-213ENST00000620277 CYTH3O43739 400 aa17.93■□□□□ 0.46
DKC1-213ENST00000620277 SPAG1Q07617 926 aa17.93■□□□□ 0.46
DKC1-213ENST00000620277 SLC35G1Q2M3R5 365 aa17.93■□□□□ 0.46
DKC1-213ENST00000620277 MSANTD4Q8NCY6 345 aa17.93■□□□□ 0.46
DKC1-213ENST00000620277 MS4A14Q96JA4 679 aa17.93■□□□□ 0.46
DKC1-213ENST00000620277 CWC15Q9P013 229 aaKnown RBP17.93■□□□□ 0.46
DKC1-213ENST00000620277 CAPN6Q9Y6Q1 641 aa17.93■□□□□ 0.46
DKC1-213ENST00000620277 SLURP2P0DP57 97 aa17.93■□□□□ 0.46
DKC1-213ENST00000620277 HIBADHP31937 336 aaKnown RBP17.93■□□□□ 0.46
DKC1-213ENST00000620277 AMPD2Q01433 879 aa17.93■□□□□ 0.46
DKC1-213ENST00000620277 CABP7Q86V35 215 aa17.93■□□□□ 0.46
DKC1-213ENST00000620277 SH3RF3Q8TEJ3 882 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms