RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 KDM3AQ9Y4C1 1321 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 ACTN4O43707 911 aaKnown RBP11.11□□□□□ -0.63
CDH23-213ENST00000619887 TOB1P50616 345 aaPredicted RBP11.11□□□□□ -0.63
CDH23-213ENST00000619887 HAUS3Q68CZ6 603 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 STXBP4Q6ZWJ1 553 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 VPS36Q86VN1 386 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 NT5C3AQ9H0P0 336 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 BARHL2Q9NY43 387 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 HDAC9Q9UKV0 1011 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDH23-213ENST00000619887 LRP6O75581 1613 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 TTLL1O95922 423 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 SLC1A4P43007 532 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 NBPF11Q86T75 865 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 TSGA10Q9BZW7 698 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 MMRN2Q9H8L6 949 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 SERPINB13Q9UIV8 391 aa11.11□□□□□ -0.63
CDH23-213ENST00000619887 EFCAB8A8MWE9 144 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 TBCAO75347 108 aaKnown RBP11.1□□□□□ -0.63
CDH23-213ENST00000619887 TACC1O75410 805 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 PAFAH1B1P43034 410 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 DNA2P51530 1060 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 NEK11Q8NG66 645 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 GJD4Q96KN9 370 aaPredicted RBP11.1□□□□□ -0.63
CDH23-213ENST00000619887 SPZ1Q9BXG8 430 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 STK17AQ9UEE5 414 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 SUGT1Q9Y2Z0 365 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 TECP42680 631 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 SMYD4Q8IYR2 804 aaPredicted RBP11.1□□□□□ -0.63
CDH23-213ENST00000619887 ZSWIM4Q9H7M6 989 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 PRDM10Q9NQV6 1147 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 SAMM50Q9Y512 469 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 GPSM2P81274 684 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 CCDC84Q86UT8 332 aaPredicted RBP11.1□□□□□ -0.63
CDH23-213ENST00000619887 LRRC47Q8N1G4 583 aaKnown RBP11.1□□□□□ -0.63
CDH23-213ENST00000619887 GUCA1BQ9UMX6 200 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 NID2Q14112 1375 aa11.1□□□□□ -0.63
CDH23-213ENST00000619887 NUP188Q5SRE5 1749 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 TMEM232C9JQI7 657 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 GCFC2P16383 781 aaKnown RBP11.09□□□□□ -0.63
CDH23-213ENST00000619887 PRPHP41219 470 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 TCERG1LQ5VWI1 586 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 C3orf67Q6ZVT6 689 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 TAF4BQ92750 862 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
CDH23-213ENST00000619887 ECM2O94769 699 aaPredicted RBP11.09□□□□□ -0.63
CDH23-213ENST00000619887 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
CDH23-213ENST00000619887 CCDC122Q5T0U0 273 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 PRR5LQ6MZQ0 368 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 USP17L2Q6R6M4 530 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 TBCKQ8TEA7 893 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 CRAMP1Q96RY5 1269 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 PIGSQ96S52 555 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 DESI2Q9BSY9 194 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 THAP9Q9H5L6 903 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 USP27XA6NNY8 438 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 H0YIN7 160 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 UBE2Q2LH0YL09 131 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 KLRK1P26718 216 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 CASP14P31944 242 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 RBL2Q08999 1139 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 NCAPHQ15003 741 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 GPR161Q8N6U8 529 aaKnown RBP11.09□□□□□ -0.63
CDH23-213ENST00000619887 SUPT20HQ8NEM7 779 aa11.09□□□□□ -0.63
CDH23-213ENST00000619887 CWC15Q9P013 229 aaKnown RBP11.09□□□□□ -0.63
CDH23-213ENST00000619887 NPR1P16066 1061 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 NCBP1Q09161 790 aaKnown RBP11.08□□□□□ -0.64
CDH23-213ENST00000619887 DPYDQ12882 1025 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 SLC44A5Q8NCS7 719 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 DPF2Q92785 391 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 GPR101Q96P66 508 aaPredicted RBP11.08□□□□□ -0.64
CDH23-213ENST00000619887 MYO1AQ9UBC5 1043 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 ERCC6LQ2NKX8 1250 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 PSTPIP2Q9H939 334 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 MFAP3LO75121 409 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 GOLGA8FQ08AF8 430 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 GOLGA8DPQ0D2H9 430 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 CUL4BQ13620 913 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 KRT31Q15323 416 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 PKN1Q16512 942 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 E4F1Q66K89 784 aaPredicted RBP11.08□□□□□ -0.64
CDH23-213ENST00000619887 MSL1Q68DK7 614 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 PPP1R18Q6NYC8 613 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 SMIM5Q71RC9 77 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 P2RX5Q93086 422 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 CCSER1Q9C0I3 900 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 QTRT2Q9H974 415 aaKnown RBP11.08□□□□□ -0.64
CDH23-213ENST00000619887 JADE2Q9NQC1 790 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 A0A1B0GTH6 734 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 TRAF5O00463 557 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 CCNE1P24864 410 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 SMARCA1P28370 1054 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 GRIN1Q05586 938 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 GABPB1Q06547 395 aaPredicted RBP11.08□□□□□ -0.64
CDH23-213ENST00000619887 USP49Q70CQ1 688 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 SLF1Q9BQI6 1058 aa11.08□□□□□ -0.64
CDH23-213ENST00000619887 CRACR2AQ9BSW2 395 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms