RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 CCNJLQ8IV13 435 aa9.8□□□□□ -0.84
CBWD1-228ENST00000619157 PLD6Q8N2A8 252 aaKnown RBP9.8□□□□□ -0.84
CBWD1-228ENST00000619157 NLGN1Q8N2Q7 840 aa9.8□□□□□ -0.84
CBWD1-228ENST00000619157 FAM181AQ8N9Y4 354 aa9.8□□□□□ -0.84
CBWD1-228ENST00000619157 RUNDC1Q96C34 613 aa9.8□□□□□ -0.84
CBWD1-228ENST00000619157 TCF12Q99081 682 aa9.8□□□□□ -0.84
CBWD1-228ENST00000619157 NARFQ9UHQ1 456 aa9.8□□□□□ -0.84
CBWD1-228ENST00000619157 CD2APQ9Y5K6 639 aa9.8□□□□□ -0.84
CBWD1-228ENST00000619157 SCN7AQ01118 1682 aa9.8□□□□□ -0.84
CBWD1-228ENST00000619157 KIF13BQ9NQT8 1826 aa9.79□□□□□ -0.84
CBWD1-228ENST00000619157 POLRMTO00411 1230 aaKnown RBP9.79□□□□□ -0.84
CBWD1-228ENST00000619157 BIN1O00499 593 aa9.79□□□□□ -0.84
CBWD1-228ENST00000619157 STARD3NLO95772 234 aa9.79□□□□□ -0.84
CBWD1-228ENST00000619157 CD96P40200 585 aa9.79□□□□□ -0.84
CBWD1-228ENST00000619157 PDE3AQ14432 1141 aa9.79□□□□□ -0.84
CBWD1-228ENST00000619157 WDR43Q15061 677 aaKnown RBP eCLIP9.79□□□□□ -0.84
CBWD1-228ENST00000619157 HP1BP3Q5SSJ5 553 aaPredicted RBP9.79□□□□□ -0.84
CBWD1-228ENST00000619157 OGFOD3Q6PK18 319 aa9.79□□□□□ -0.84
CBWD1-228ENST00000619157 LAMB4A4D0S4 1761 aa9.78□□□□□ -0.84
CBWD1-228ENST00000619157 CARMIL3Q8ND23 1372 aa9.78□□□□□ -0.84
CBWD1-228ENST00000619157 EIF4EBP3O60516 100 aaPredicted RBP9.78□□□□□ -0.84
CBWD1-228ENST00000619157 CAMTA2O94983 1202 aa9.78□□□□□ -0.84
CBWD1-228ENST00000619157 NEFMP07197 916 aa9.78□□□□□ -0.84
CBWD1-228ENST00000619157 SNRPA1P09661 255 aaKnown RBP9.78□□□□□ -0.84
CBWD1-228ENST00000619157 IL6STP40189 918 aaPredicted RBP9.78□□□□□ -0.84
CBWD1-228ENST00000619157 USP5P45974 858 aa9.78□□□□□ -0.84
CBWD1-228ENST00000619157 CDK5R2Q13319 367 aa9.78□□□□□ -0.84
CBWD1-228ENST00000619157 NFIXQ14938 502 aa9.78□□□□□ -0.84
CBWD1-228ENST00000619157 KRT24Q2M2I5 525 aa9.78□□□□□ -0.84
CBWD1-228ENST00000619157 STK11IPQ8N1F8 1099 aa9.78□□□□□ -0.84
CBWD1-228ENST00000619157 PNISRQ8TF01 805 aaKnown RBP9.78□□□□□ -0.84
CBWD1-228ENST00000619157 TEX13AQ9BXU3 409 aaPredicted RBP9.78□□□□□ -0.84
CBWD1-228ENST00000619157 PNNQ9H307 717 aaKnown RBP9.78□□□□□ -0.84
CBWD1-228ENST00000619157 RC3H2Q9HBD1 1191 aaKnown RBP9.78□□□□□ -0.84
CBWD1-228ENST00000619157 WWC3Q9ULE0 1092 aa9.78□□□□□ -0.84
CBWD1-228ENST00000619157 NRXN2Q9P2S2 1712 aa9.78□□□□□ -0.84
CBWD1-228ENST00000619157 APAF1O14727 1248 aa9.77□□□□□ -0.85
CBWD1-228ENST00000619157 AOC2O75106 756 aa9.77□□□□□ -0.85
CBWD1-228ENST00000619157 KCNA3P22001 575 aa9.77□□□□□ -0.85
CBWD1-228ENST00000619157 LRP10Q7Z4F1 713 aa9.77□□□□□ -0.85
CBWD1-228ENST00000619157 GJD3Q8N144 294 aa9.77□□□□□ -0.85
CBWD1-228ENST00000619157 WDR18Q9BV38 432 aa9.77□□□□□ -0.85
CBWD1-228ENST00000619157 GSX1Q9H4S2 264 aaPredicted RBP9.77□□□□□ -0.85
CBWD1-228ENST00000619157 PPP1R9AQ9ULJ8 1098 aa9.77□□□□□ -0.85
CBWD1-228ENST00000619157 BCORQ6W2J9 1755 aa9.77□□□□□ -0.85
CBWD1-228ENST00000619157 CHL1O00533 1208 aa9.76□□□□□ -0.85
CBWD1-228ENST00000619157 FAM13AO94988 1023 aa9.76□□□□□ -0.85
CBWD1-228ENST00000619157 CD8BP10966 210 aa9.76□□□□□ -0.85
CBWD1-228ENST00000619157 NPR3P17342 541 aa9.76□□□□□ -0.85
CBWD1-228ENST00000619157 TBC1D9BQ66K14 1250 aa9.76□□□□□ -0.85
CBWD1-228ENST00000619157 FAM168AQ92567 244 aa9.76□□□□□ -0.85
CBWD1-228ENST00000619157 ANO2Q9NQ90 1003 aa9.76□□□□□ -0.85
CBWD1-228ENST00000619157 TSPYL4Q9UJ04 414 aa9.76□□□□□ -0.85
CBWD1-228ENST00000619157 ADAMTS6Q9UKP5 1117 aa9.76□□□□□ -0.85
CBWD1-228ENST00000619157 U3KQE9 123 aa9.76□□□□□ -0.85
CBWD1-228ENST00000619157 N4BP2Q86UW6 1770 aaPredicted RBP9.75□□□□□ -0.85
CBWD1-228ENST00000619157 AFDNP55196 1824 aaKnown RBP9.75□□□□□ -0.85
CBWD1-228ENST00000619157 A0A0G2JLW4 131 aa9.75□□□□□ -0.85
CBWD1-228ENST00000619157 B3GALT4O96024 378 aa9.75□□□□□ -0.85
CBWD1-228ENST00000619157 FAM87AP0C7U9 286 aa9.75□□□□□ -0.85
CBWD1-228ENST00000619157 ZNF853P0CG23 659 aa9.75□□□□□ -0.85
CBWD1-228ENST00000619157 DPEP1P16444 411 aa9.75□□□□□ -0.85
CBWD1-228ENST00000619157 CYP27C1Q4G0S4 372 aa9.75□□□□□ -0.85
CBWD1-228ENST00000619157 CCDC97Q96F63 343 aaPredicted RBP9.75□□□□□ -0.85
CBWD1-228ENST00000619157 A0A087WZG4 1122 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 DBX1A6NMT0 343 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 ANP32CO43423 234 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 RNASE1P07998 156 aaKnown RBP9.74□□□□□ -0.85
CBWD1-228ENST00000619157 FUT4P22083 530 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 CHRNA5P30532 468 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 LMOD3Q0VAK6 560 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 HLFQ16534 295 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 GPR162Q16538 588 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 PROSER3Q2NL68 480 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 SPOCD1Q6ZMY3 1216 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 TTLL7Q6ZT98 887 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 GALNT12Q8IXK2 581 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 ZFYVE1Q9HBF4 777 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 MRS2Q9HD23 443 aa9.74□□□□□ -0.85
CBWD1-228ENST00000619157 MBNL3Q9NUK0 354 aaKnown RBP9.74□□□□□ -0.85
CBWD1-228ENST00000619157 BRCA1P38398 1863 aaKnown RBP9.74□□□□□ -0.85
CBWD1-228ENST00000619157 FARP2O94887 1054 aaPredicted RBP9.73□□□□□ -0.85
CBWD1-228ENST00000619157 ANXA1P04083 346 aa9.73□□□□□ -0.85
CBWD1-228ENST00000619157 SERPINB2P05120 415 aa9.73□□□□□ -0.85
CBWD1-228ENST00000619157 TGFB2P61812 414 aa9.73□□□□□ -0.85
CBWD1-228ENST00000619157 ZNF211Q13398 564 aaPredicted RBP9.73□□□□□ -0.85
CBWD1-228ENST00000619157 GLIS3Q8NEA6 775 aa9.73□□□□□ -0.85
CBWD1-228ENST00000619157 ZNF576Q9H609 170 aa9.73□□□□□ -0.85
CBWD1-228ENST00000619157 BABAM1Q9NWV8 329 aa9.73□□□□□ -0.85
CBWD1-228ENST00000619157 ANKRD31Q8N7Z5 1873 aa9.72□□□□□ -0.85
CBWD1-228ENST00000619157 ABL1P00519 1130 aa9.72□□□□□ -0.85
CBWD1-228ENST00000619157 YY1P25490 414 aa9.72□□□□□ -0.85
CBWD1-228ENST00000619157 PKN1Q16512 942 aa9.72□□□□□ -0.85
CBWD1-228ENST00000619157 PRR5LQ6MZQ0 368 aa9.72□□□□□ -0.85
CBWD1-228ENST00000619157 ATG4DQ86TL0 474 aaPredicted RBP9.72□□□□□ -0.85
CBWD1-228ENST00000619157 LRRN4CLQ8ND94 238 aa9.72□□□□□ -0.85
CBWD1-228ENST00000619157 NETO1Q8TDF5 533 aa9.72□□□□□ -0.85
CBWD1-228ENST00000619157 MISP3Q96FF7 219 aa9.72□□□□□ -0.85
CBWD1-228ENST00000619157 KRTAP4-2Q9BYR5 136 aa9.72□□□□□ -0.85
CBWD1-228ENST00000619157 ZC3H12CQ9C0D7 883 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms