RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TMEM232C9JQI7 657 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 TUBBP07437 444 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 RHOXF2BP0C7M4 288 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 TMED8Q6PL24 325 aaPredicted RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 TRMT44Q8IYL2 757 aaKnown RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 RTKN2Q8IZC4 609 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 ZNF444Q8N0Y2 327 aaPredicted RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 STAG1Q8WVM7 1258 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 DPF2Q92785 391 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 DHX58Q96C10 678 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 CLIC6Q96NY7 704 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 RHOXF2Q9BQY4 288 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 EPC1Q9H2F5 836 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 ZNF277Q9NRM2 450 aaPredicted RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 GJB4Q9NTQ9 266 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 ARPP21Q9UBL0 812 aaPredicted RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 BCS1LQ9Y276 419 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 FAM205AQ6ZU69 1335 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 FDPSP14324 419 aaKnown RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 MCM3P25205 808 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 FAM47AQ5JRC9 791 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 SPECC1Q5M775 1068 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 IGSF22Q8N9C0 903 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 PHKBQ93100 1093 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 TEKT1Q969V4 418 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 BRMS1Q9HCU9 246 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 USP40Q9NVE5 1235 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 USP17L3A6NCW0 530 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 USP17L4A6NCW7 530 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 POLR2DO15514 142 aaKnown RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 SH3D19Q5HYK7 790 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 USP17L1Q7RTZ2 530 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 SRGAP1Q7Z6B7 1085 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 ZSCAN29Q8IWY8 852 aaPredicted RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 FBXO22Q8NEZ5 403 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 DYNLL2Q96FJ2 89 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 NUP88Q99567 741 aaPredicted RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 NAA15Q9BXJ9 866 aaKnown RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 KIAA1522Q9P206 1035 aaPredicted RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 RSPH14Q9UHP6 348 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 TNS1Q9HBL0 1735 aaKnown RBP7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 ZMYM6O95789 1325 aa7.86□□□□□ -1.15
SRGAP3-213ENST00000618999 CCDC196A0A1B0GTZ2 297 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 SPDYE5A6NIY4 337 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 SH2B2O14492 632 aaPredicted RBP7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 GPR37O15354 613 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 PHACTR2O75167 634 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 RAD17O75943 681 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 PPP4CP60510 307 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 NCAPHQ15003 741 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 SKIDA1Q1XH10 827 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 DALRD3Q5D0E6 543 aaKnown RBP7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 CNGA4Q8IV77 575 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 DEPDC4Q8N2C3 294 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 CERS5Q8N5B7 392 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 MTMR14Q8NCE2 650 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 ZBTB9Q96C00 473 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 CRACR2AQ9BSW2 395 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 RTFDC1Q9BY42 306 aaPredicted RBP7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 AGXT2Q9BYV1 514 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 CRISPLD2Q9H0B8 497 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 SENP2Q9HC62 589 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 DAGLAQ9Y4D2 1042 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 MRFAP1Q9Y605 127 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 GPR75-ASB3A0A0A6YYF3 556 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 AXDND1Q5T1B0 1012 aaPredicted RBP7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 IFIT1BQ5T764 474 aaKnown RBP7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 REXO1L1PQ8IX06 675 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 TMTC2Q8N394 836 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 NKX2-3Q8TAU0 364 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 WDR24Q96S15 920 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 TUBE1Q9UJT0 475 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 ADAM21Q9UKJ8 722 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 MYO5AQ9Y4I1 1855 aaKnown RBP7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 VWA3AA6NCI4 1184 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 KIF28PB7ZC32 967 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 ZRANB2O95218 330 aaKnown RBP eCLIP7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 ACTN2P35609 894 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 STX17P56962 302 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 EVX2Q03828 476 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 LONRF3Q496Y0 759 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 TOGARAM2Q6ZUX3 1019 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 PDE11AQ9HCR9 933 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 GOLGB1Q14789 3259 aaKnown RBP7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 TNKSO95271 1327 aa7.85□□□□□ -1.15
SRGAP3-213ENST00000618999 N4BP3O15049 544 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 TBC1D8O95759 1140 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 AFMP43652 599 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 TFAP4Q01664 338 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 RILPL1Q5EBL4 403 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 MUM1L1Q5H9M0 696 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 STRIP1Q5VSL9 837 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 APOA5Q6Q788 366 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 IGDCC4Q8TDY8 1250 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 RUFY1Q96T51 708 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 NAPGQ99747 312 aaPredicted RBP7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 SGIP1Q9BQI5 828 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 ZNF287Q9HBT7 754 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 CDC23Q9UJX2 597 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 SUGT1Q9Y2Z0 365 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms