RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 ENOX1Q8TC92 643 aaKnown RBP14.04□□□□□ -0.16
CIITA-212ENST00000618207 GJA10Q969M2 543 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 ZMYND12Q9H0C1 365 aa14.04□□□□□ -0.16
CIITA-212ENST00000618207 C21orf2O43822 256 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 GDF11O95390 407 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 TXKP42681 527 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 SNAP25P60880 206 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 E4F1Q66K89 784 aaPredicted RBP14.03□□□□□ -0.16
CIITA-212ENST00000618207 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 VSTM4Q8IW00 320 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 TRIML1Q8N9V2 468 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 LZTS2Q9BRK4 669 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 TDRD3Q9H7E2 651 aaKnown RBP14.03□□□□□ -0.16
CIITA-212ENST00000618207 COL11A2P13942 1736 aaPredicted RBP14.03□□□□□ -0.16
CIITA-212ENST00000618207 TTLL1O95922 423 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 GNA11P29992 359 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 NAA30Q147X3 362 aaPredicted RBP14.03□□□□□ -0.16
CIITA-212ENST00000618207 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
CIITA-212ENST00000618207 REXO1Q8N1G1 1221 aaKnown RBP14.03□□□□□ -0.16
CIITA-212ENST00000618207 CCDC150Q8NCX0 1101 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 GSDMAQ96QA5 445 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 TMX1Q9H3N1 280 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 SLX4Q8IY92 1834 aa14.03□□□□□ -0.16
CIITA-212ENST00000618207 LONP1P36776 959 aaKnown RBP14.02□□□□□ -0.16
CIITA-212ENST00000618207 TNNI2P48788 182 aa14.02□□□□□ -0.16
CIITA-212ENST00000618207 PODNQ7Z5L7 613 aa14.02□□□□□ -0.16
CIITA-212ENST00000618207 POTEDQ86YR6 584 aa14.02□□□□□ -0.16
CIITA-212ENST00000618207 ELOA2Q8IYF1 753 aaPredicted RBP14.02□□□□□ -0.16
CIITA-212ENST00000618207 ADGRF4Q8IZF3 695 aa14.02□□□□□ -0.16
CIITA-212ENST00000618207 DNAJC18Q9H819 358 aa14.02□□□□□ -0.16
CIITA-212ENST00000618207 DISC1Q9NRI5 854 aa14.02□□□□□ -0.16
CIITA-212ENST00000618207 SCN9AQ15858 1988 aa14.02□□□□□ -0.17
CIITA-212ENST00000618207 PPP1R3GB7ZBB8 358 aa14.02□□□□□ -0.17
CIITA-212ENST00000618207 USP17L10C9JJH3 530 aa14.02□□□□□ -0.17
CIITA-212ENST00000618207 ZBTB22O15209 634 aa14.02□□□□□ -0.17
CIITA-212ENST00000618207 ZNF18P17022 549 aa14.02□□□□□ -0.17
CIITA-212ENST00000618207 ARL6IP4Q66PJ3 421 aaKnown RBP14.02□□□□□ -0.17
CIITA-212ENST00000618207 LRRC15Q8TF66 581 aa14.02□□□□□ -0.17
CIITA-212ENST00000618207 CCDC12Q8WUD4 166 aaPredicted RBP14.02□□□□□ -0.17
CIITA-212ENST00000618207 TRIM34Q9BYJ4 488 aa14.02□□□□□ -0.17
CIITA-212ENST00000618207 LTBP1Q14766 1721 aa14.02□□□□□ -0.17
CIITA-212ENST00000618207 TRIM49BA6NDI0 452 aa14.01□□□□□ -0.17
CIITA-212ENST00000618207 PES1O00541 588 aaKnown RBP14.01□□□□□ -0.17
CIITA-212ENST00000618207 DYNC1I1O14576 645 aa14.01□□□□□ -0.17
CIITA-212ENST00000618207 NAALADL2Q58DX5 795 aa14.01□□□□□ -0.17
CIITA-212ENST00000618207 NEK8Q86SG6 692 aa14.01□□□□□ -0.17
CIITA-212ENST00000618207 FLAD1Q8NFF5 587 aa14.01□□□□□ -0.17
CIITA-212ENST00000618207 TULP1O00294 542 aaPredicted RBP14.01□□□□□ -0.17
CIITA-212ENST00000618207 NRDCO43847 1150 aa14.01□□□□□ -0.17
CIITA-212ENST00000618207 IGSF3O75054 1194 aa14.01□□□□□ -0.17
CIITA-212ENST00000618207 TDP2O95551 362 aa14.01□□□□□ -0.17
CIITA-212ENST00000618207 RPN1P04843 607 aaKnown RBP14.01□□□□□ -0.17
CIITA-212ENST00000618207 KRT25Q7Z3Z0 450 aa14.01□□□□□ -0.17
CIITA-212ENST00000618207 NUP88Q99567 741 aaPredicted RBP14.01□□□□□ -0.17
CIITA-212ENST00000618207 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.01□□□□□ -0.17
CIITA-212ENST00000618207 V9GYY5 206 aaPredicted RBP14.01□□□□□ -0.17
CIITA-212ENST00000618207 LRRC37AA6NMS7 1700 aa14.01□□□□□ -0.17
CIITA-212ENST00000618207 OR52Z1P0C646 297 aa14□□□□□ -0.17
CIITA-212ENST00000618207 TAL1P17542 331 aaPredicted RBP14□□□□□ -0.17
CIITA-212ENST00000618207 HHIPL2Q6UWX4 724 aa14□□□□□ -0.17
CIITA-212ENST00000618207 ZFP91Q96JP5 570 aaPredicted RBP14□□□□□ -0.17
CIITA-212ENST00000618207 VPS16Q9H269 839 aa14□□□□□ -0.17
CIITA-212ENST00000618207 RIOX1Q9H6W3 641 aa14□□□□□ -0.17
CIITA-212ENST00000618207 JMJD4Q9H9V9 463 aa14□□□□□ -0.17
CIITA-212ENST00000618207 PPIP5K2O43314 1243 aa14□□□□□ -0.17
CIITA-212ENST00000618207 GTPBP6O43824 516 aaPredicted RBP14□□□□□ -0.17
CIITA-212ENST00000618207 PLCG1P19174 1290 aa14□□□□□ -0.17
CIITA-212ENST00000618207 IKQ13123 557 aaPredicted RBP14□□□□□ -0.17
CIITA-212ENST00000618207 SPATA1Q5VX52 437 aa14□□□□□ -0.17
CIITA-212ENST00000618207 CABP7Q86V35 215 aa14□□□□□ -0.17
CIITA-212ENST00000618207 DAGLBQ8NCG7 672 aa14□□□□□ -0.17
CIITA-212ENST00000618207 FAM198AQ9UFP1 575 aa14□□□□□ -0.17
CIITA-212ENST00000618207 SCAF8Q9UPN6 1271 aaKnown RBP14□□□□□ -0.17
CIITA-212ENST00000618207 SUGT1Q9Y2Z0 365 aa14□□□□□ -0.17
CIITA-212ENST00000618207 PPP1R11O60927 126 aaPredicted RBP14□□□□□ -0.17
CIITA-212ENST00000618207 EEF2P13639 858 aaKnown RBP14□□□□□ -0.17
CIITA-212ENST00000618207 ERCC5P28715 1186 aaPredicted RBP14□□□□□ -0.17
CIITA-212ENST00000618207 PRCPP42785 496 aa14□□□□□ -0.17
CIITA-212ENST00000618207 ZNF543Q08ER8 600 aa14□□□□□ -0.17
CIITA-212ENST00000618207 SEPT2Q15019 361 aa14□□□□□ -0.17
CIITA-212ENST00000618207 CERKLQ49MI3 558 aaPredicted RBP14□□□□□ -0.17
CIITA-212ENST00000618207 DACT2Q5SW24 774 aa14□□□□□ -0.17
CIITA-212ENST00000618207 GALNT17Q6IS24 598 aa14□□□□□ -0.17
CIITA-212ENST00000618207 SH3BP5LQ7L8J4 393 aa14□□□□□ -0.17
CIITA-212ENST00000618207 CCDC112Q8NEF3 446 aa14□□□□□ -0.17
CIITA-212ENST00000618207 HPS3Q969F9 1004 aa14□□□□□ -0.17
CIITA-212ENST00000618207 PPP1R13BQ96KQ4 1090 aa14□□□□□ -0.17
CIITA-212ENST00000618207 CLRN2A0PK11 232 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 POTEMA6NI47 508 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 SLC37A4O43826 429 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 RAD17O75943 681 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 ADCY7P51828 1080 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 ASPRV1Q53RT3 343 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 SPECC1LQ69YQ0 1117 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 SYT10Q6XYQ8 523 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 NELFBQ8WX92 580 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 USP17L15C9J2P7 530 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 USP17L13C9JLJ4 530 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 USP17L11C9JVI0 530 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 USP17L18D6R9N7 530 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms