RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 USP17L2Q6R6M4 530 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 CD99L2Q8TCZ2 262 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 BRI3BPQ8WY22 251 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 ERO1AQ96HE7 468 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 GZF1Q9H116 711 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 GLT8D2Q9H1C3 349 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 VPS54Q9P1Q0 977 aa19.24■□□□□ 0.67
TRAPPC3-210ENST00000617904 USP17L5A8MUK1 530 aa19.23■□□□□ 0.67
TRAPPC3-210ENST00000617904 GDF11O95390 407 aa19.23■□□□□ 0.67
TRAPPC3-210ENST00000617904 ANO1Q5XXA6 986 aa19.23■□□□□ 0.67
TRAPPC3-210ENST00000617904 PPP1R18Q6NYC8 613 aa19.23■□□□□ 0.67
TRAPPC3-210ENST00000617904 CCDC73Q6ZRK6 1079 aa19.23■□□□□ 0.67
TRAPPC3-210ENST00000617904 HEATR3Q7Z4Q2 680 aa19.23■□□□□ 0.67
TRAPPC3-210ENST00000617904 STAG2Q8N3U4 1231 aa19.23■□□□□ 0.67
TRAPPC3-210ENST00000617904 GMCL1Q96IK5 515 aa19.23■□□□□ 0.67
TRAPPC3-210ENST00000617904 RIOX1Q9H6W3 641 aa19.23■□□□□ 0.67
TRAPPC3-210ENST00000617904 KCNJ14Q9UNX9 436 aa19.23■□□□□ 0.67
TRAPPC3-210ENST00000617904 FAM196BA6NMK8 535 aa19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 GOLGA8HP0CJ92 632 aa19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 CAP2P40123 477 aa19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 TRAPPC10P48553 1259 aa19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 NASPP49321 788 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 CEBPZQ03701 1054 aaKnown RBP19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 IKQ13123 557 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 CCDC183Q5T5S1 534 aa19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 L1TD1Q5T7N2 865 aaKnown RBP19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 USP28Q96RU2 1077 aa19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 BARHL2Q9NY43 387 aa19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 ZBTB21Q9ULJ3 1066 aa19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 PTPN22Q9Y2R2 807 aa19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 MYH6P13533 1939 aa19.22■□□□□ 0.67
TRAPPC3-210ENST00000617904 CCL15-CCL14A0A0B4J2E2 113 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 BTBD18B2RXH4 712 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 SPTLC2O15270 562 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 NAPAP54920 295 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 SP3Q02447 781 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 MAP3K10Q02779 954 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 CCL15Q16663 113 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 MCTP2Q6DN12 878 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 BLIDQ8IZY5 108 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 PIBF1Q8WXW3 757 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 ZNF341Q9BYN7 854 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 GPCPD1Q9NPB8 672 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 DDX19AQ9NUU7 478 aaKnown RBP19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 PCDHA4Q9UN74 947 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 CSADQ9Y600 493 aa19.21■□□□□ 0.67
TRAPPC3-210ENST00000617904 PNMA6FA0A0J9YX94 578 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 CCDC194A0A1B0GVG4 234 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 SPDYE5A6NIY4 337 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 PPP6R2O75170 966 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 GTF2A2P52657 109 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 PRPF38BQ5VTL8 546 aaKnown RBP19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 HOMER1Q86YM7 354 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 DAGLBQ8NCG7 672 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 GPT2Q8TD30 523 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 OTUD5Q96G74 571 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 EFCC1Q9HA90 598 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 VAT1LQ9HCJ6 419 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 GJB4Q9NTQ9 266 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 SNCAIPQ9Y6H5 919 aa19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 GREB1LQ9C091 1923 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 FRMPD2Q68DX3 1309 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC3-210ENST00000617904 MYH15Q9Y2K3 1946 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 TRIM75PA6NK02 468 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 KIF28PB7ZC32 967 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 F5H6K3 240 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 CTNND1O60716 968 aaKnown RBP19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 BMP3P12645 472 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 KLRC3Q07444 240 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 SLC39A14Q15043 492 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 ADALQ6DHV7 355 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 FAM43AQ8N2R8 423 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 LINC00301Q8NCQ3 95 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 CHAMP1Q96JM3 812 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 AS3MTQ9HBK9 375 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 TMX2Q9Y320 296 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 SIPA1L1O43166 1804 aa19.19■□□□□ 0.66
TRAPPC3-210ENST00000617904 A0A1W2PQ27 194 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 A0A1W2PQ64 194 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 A0A1W2PQD8 194 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 hCG_1642624A0A1W2PR95 340 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 ESYT2A0FGR8 921 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 POTEFA5A3E0 1075 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 GOLGA6L3A6NEY3 463 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 GADD45BO75293 160 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 TAF1CQ15572 869 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 MIGA2Q7L4E1 593 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 KRT25Q7Z3Z0 450 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 TEX2Q8IWB9 1127 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 CHURC1Q8WUH1 139 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 CCDC34Q96HJ3 373 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 WRNIP1Q96S55 665 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 FEZ1Q99689 392 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 ZFYVE28Q9HCC9 887 aa19.18■□□□□ 0.66
TRAPPC3-210ENST00000617904 ZBTB5O15062 677 aa19.17■□□□□ 0.66
TRAPPC3-210ENST00000617904 FAM160B2Q86V87 743 aa19.17■□□□□ 0.66
TRAPPC3-210ENST00000617904 ERO1BQ86YB8 467 aa19.17■□□□□ 0.66
TRAPPC3-210ENST00000617904 ZKSCAN4Q969J2 545 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC3-210ENST00000617904 PIGSQ96S52 555 aa19.17■□□□□ 0.66
TRAPPC3-210ENST00000617904 UBA5Q9GZZ9 404 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms