RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 KCNG1Q9UIX4 513 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 KCNJ14Q9UNX9 436 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 PLEKHG1Q9ULL1 1385 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 SOWAHDA6NJG2 315 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 DNAJC8O75937 253 aaPredicted RBP11.27□□□□□ -0.61
CUL4A-212ENST00000617546 USP14P54578 494 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 SLC20A2Q08357 652 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 ZNF790Q6PG37 636 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 ZCRB1Q8TBF4 217 aaKnown RBP11.27□□□□□ -0.61
CUL4A-212ENST00000617546 CENPKQ9BS16 269 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 KCNF1Q9H3M0 494 aa11.27□□□□□ -0.61
CUL4A-212ENST00000617546 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 IRS4O14654 1257 aaPredicted RBP11.26□□□□□ -0.61
CUL4A-212ENST00000617546 CALCRLQ16602 461 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 MAN2A1Q16706 1144 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 RBM26Q5T8P6 1007 aaKnown RBP11.26□□□□□ -0.61
CUL4A-212ENST00000617546 PPP1R2P3Q6NXS1 205 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 ZNF804AQ7Z570 1209 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 PSMB7Q99436 277 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 PPFIA2O75334 1257 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 TIMM10P62072 90 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 ATP2A3Q93084 1043 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 MCM9Q9NXL9 1143 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 GOLGA8QA0A0J9YX86 632 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 GOLGA8OA6NCC3 632 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 GOLGA8NF8WBI6 632 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 CTNND1O60716 968 aaKnown RBP11.26□□□□□ -0.61
CUL4A-212ENST00000617546 UBE3CQ15386 1083 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 SEPT14Q6ZU15 432 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 PARP9Q8IXQ6 854 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 BLIDQ8IZY5 108 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 ANKRD42Q8N9B4 389 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
CUL4A-212ENST00000617546 PLIN2Q99541 437 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 OPHN1O60890 802 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 XRCC5P13010 732 aaKnown RBP11.26□□□□□ -0.61
CUL4A-212ENST00000617546 KCTD16Q68DU8 428 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 TCP11Q8WWU5 503 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 CNOT6LQ96LI5 555 aaKnown RBP11.26□□□□□ -0.61
CUL4A-212ENST00000617546 FGFR1OP2Q9NVK5 253 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 PLEKHG3A1L390 1219 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 PFDN1O60925 122 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 ADCY7P51828 1080 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 SNX16P57768 344 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 HIBCHQ6NVY1 386 aaPredicted RBP11.26□□□□□ -0.61
CUL4A-212ENST00000617546 DHX40Q8IX18 779 aaKnown RBP11.26□□□□□ -0.61
CUL4A-212ENST00000617546 FMR1NBQ8N0W7 255 aaPredicted RBP11.26□□□□□ -0.61
CUL4A-212ENST00000617546 RPGRQ92834 1020 aaKnown RBP11.26□□□□□ -0.61
CUL4A-212ENST00000617546 IWS1Q96ST2 819 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 NYXQ9GZU5 481 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 DAAM1Q9Y4D1 1078 aa11.26□□□□□ -0.61
CUL4A-212ENST00000617546 RPSAP08865 295 aaKnown RBP11.25□□□□□ -0.61
CUL4A-212ENST00000617546 BRD2P25440 801 aaKnown RBP11.25□□□□□ -0.61
CUL4A-212ENST00000617546 PLCB4Q15147 1175 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 DBN1Q16643 649 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 CCDC144BQ3MJ40 725 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 HERC4Q5GLZ8 1057 aaPredicted RBP11.25□□□□□ -0.61
CUL4A-212ENST00000617546 PI4K2BQ8TCG2 481 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 COG1Q8WTW3 980 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.25□□□□□ -0.61
CUL4A-212ENST00000617546 P2RX5Q93086 422 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 DNM3Q9UQ16 869 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 MAP3K7O43318 606 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 E2F5Q15329 346 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 NEK9Q8TD19 979 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 NHEJ1Q9H9Q4 299 aaPredicted RBP11.25□□□□□ -0.61
CUL4A-212ENST00000617546 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.25□□□□□ -0.61
CUL4A-212ENST00000617546 CREB3O43889 395 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 UNC5CLQ8IV45 518 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 C3orf20Q8ND61 904 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 AATFQ9NY61 560 aaKnown RBP eCLIP11.25□□□□□ -0.611e-6■□□□□ 9.7
CUL4A-212ENST00000617546 AGTPBP1Q9UPW5 1226 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 GMNCA6NCL1 334 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 THAP12O43422 761 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 DCTN3O75935 186 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 C2orf54Q08AI8 447 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 TEX11Q8IYF3 940 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 MPHOSPH6Q99547 160 aaKnown RBP11.25□□□□□ -0.61
CUL4A-212ENST00000617546 CXorf56Q9H5V9 222 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 STK36Q9NRP7 1315 aa11.25□□□□□ -0.61
CUL4A-212ENST00000617546 DKC1O60832 514 aaKnown RBP eCLIP11.24□□□□□ -0.612e-6■■■□□ 19.1
CUL4A-212ENST00000617546 SERPING1P05155 500 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 CORO7P57737 925 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 DEUP1Q05D60 604 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 PSMD2Q13200 908 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 TSGA10IPQ3SY00 556 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 PARP10Q53GL7 1025 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 MIER3Q7Z3K6 550 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 U2AF1L4Q8WU68 220 aaKnown RBP11.24□□□□□ -0.61
CUL4A-212ENST00000617546 DDX23Q9BUQ8 820 aaKnown RBP11.24□□□□□ -0.61
CUL4A-212ENST00000617546 PDE8AO60658 829 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 CYP21A2P08686 494 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 CCZ1BP86790 482 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 CCZ1P86791 482 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-212ENST00000617546 CLIC6Q96NY7 704 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 ARMT1Q9H993 441 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 KLC4Q9NSK0 619 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 ARPP21Q9UBL0 812 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-212ENST00000617546 FAF1Q9UNN5 650 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms