RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 FAM193AP78312 1265 aa16.29■□□□□ 0.2
SHROOM1-208ENST00000617339 SLC35G1Q2M3R5 365 aa16.29■□□□□ 0.2
SHROOM1-208ENST00000617339 LEKR1Q6ZMV7 388 aa16.29■□□□□ 0.2
SHROOM1-208ENST00000617339 DDX4Q9NQI0 724 aaKnown RBP16.29■□□□□ 0.2
SHROOM1-208ENST00000617339 DAGLAQ9Y4D2 1042 aa16.29■□□□□ 0.2
SHROOM1-208ENST00000617339 RAD17O75943 681 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 UBE2SQ16763 222 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 SPICE1Q8N0Z3 855 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 LARGE2Q8N3Y3 721 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 ZHX3Q9H4I2 956 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 MYH13Q9UKX3 1938 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 GDF11O95390 407 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 PFKFB3Q16875 520 aaPredicted RBP16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 TRIM65Q6PJ69 517 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 CERS5Q8N5B7 392 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 CTDP1Q9Y5B0 961 aaPredicted RBP16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 EFCAB8A8MWE9 144 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 DDAH1O94760 285 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 IL17AQ16552 155 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 DRC1Q96MC2 740 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 MAD2L2Q9UI95 211 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 GJA3Q9Y6H8 435 aa16.28■□□□□ 0.2
SHROOM1-208ENST00000617339 TRIM49BA6NDI0 452 aa16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 EZH2Q15910 746 aaKnown RBP16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 DTHD1Q6ZMT9 781 aa16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 REXO1L1PQ8IX06 675 aa16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 SLF2Q8IX21 1173 aa16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 PDE11AQ9HCR9 933 aa16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 CLRN2A0PK11 232 aa16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 POLRMTO00411 1230 aaKnown RBP16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 ORC4O43929 436 aa16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 IDEP14735 1019 aa16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 CCDC178Q5BJE1 867 aa16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 GPATCH11Q8N954 259 aa16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 PCMTD1Q96MG8 357 aaPredicted RBP16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 NUP88Q99567 741 aaPredicted RBP16.27■□□□□ 0.2
SHROOM1-208ENST00000617339 PLCH1Q4KWH8 1693 aa16.27■□□□□ 0.19
SHROOM1-208ENST00000617339 ACTN4O43707 911 aaKnown RBP16.27■□□□□ 0.19
SHROOM1-208ENST00000617339 BBOX1O75936 387 aa16.27■□□□□ 0.19
SHROOM1-208ENST00000617339 DYMQ7RTS9 669 aa16.27■□□□□ 0.19
SHROOM1-208ENST00000617339 NPY5RQ15761 445 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 SRLQ86TD4 932 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 IRX2Q9BZI1 471 aaPredicted RBP16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 SUGCTQ9HAC7 445 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 ZNF287Q9HBT7 754 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 TAB2Q9NYJ8 693 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 HLA-DOAP06340 250 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 LZTFL1Q9NQ48 299 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 PHLPP2Q6ZVD8 1323 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 N4BP1O75113 896 aaKnown RBP16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 PRKG1Q13976 671 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 MTF1Q14872 753 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 LONRF2Q1L5Z9 754 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 MUM1L1Q5H9M0 696 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 OGFOD1Q8N543 542 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 HSD3B7Q9H2F3 369 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 TUBE1Q9UJT0 475 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 BCS1LQ9Y276 419 aa16.26■□□□□ 0.19
SHROOM1-208ENST00000617339 TXLNAP40222 546 aa16.25■□□□□ 0.19
SHROOM1-208ENST00000617339 BAG6P46379 1132 aa16.25■□□□□ 0.19
SHROOM1-208ENST00000617339 USH1GQ495M9 461 aa16.25■□□□□ 0.19
SHROOM1-208ENST00000617339 IQUBQ8NA54 791 aa16.25■□□□□ 0.19
SHROOM1-208ENST00000617339 N4BP3O15049 544 aa16.25■□□□□ 0.19
SHROOM1-208ENST00000617339 CCDC102AQ96A19 550 aa16.25■□□□□ 0.19
SHROOM1-208ENST00000617339 RRP36Q96EU6 259 aaKnown RBP16.25■□□□□ 0.19
SHROOM1-208ENST00000617339 PPP2R2CQ9Y2T4 447 aa16.25■□□□□ 0.19
SHROOM1-208ENST00000617339 GOLGA6L1Q8N7Z2 621 aa16.25■□□□□ 0.19
SHROOM1-208ENST00000617339 GOLGA5Q8TBA6 731 aa16.25■□□□□ 0.19
SHROOM1-208ENST00000617339 MED15Q96RN5 788 aa16.25■□□□□ 0.19
SHROOM1-208ENST00000617339 AHDC1Q5TGY3 1603 aaPredicted RBP16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 LOC102724159A0A0B4J2E5 919 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 PWP2Q15269 919 aaKnown RBP16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 SLC30A10Q6XR72 485 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 TBCKQ8TEA7 893 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 TBC1D7Q9P0N9 293 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 PCDHA4Q9UN74 947 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 TPM1P09493 284 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 PDE6BP35913 854 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 DPYDQ12882 1025 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 FUT8Q9BYC5 575 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 PCDHA6Q9UN73 950 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 PCDHA8Q9Y5H6 950 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 LTBP4Q8N2S1 1624 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 CCP110O43303 1012 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 RHOXF2BP0C7M4 288 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 ALDH1B1P30837 517 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 NOP2P46087 812 aaKnown RBP16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 MDM2Q00987 491 aaPredicted RBP16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 AOC3Q16853 763 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 DGKHQ86XP1 1220 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 RHOXF2Q9BQY4 288 aa16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 TDRD3Q9H7E2 651 aaKnown RBP16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 CICQ96RK0 1608 aaPredicted RBP16.24■□□□□ 0.19
SHROOM1-208ENST00000617339 MYH7P12883 1935 aa16.23■□□□□ 0.19
SHROOM1-208ENST00000617339 TCP10L2B9ZVM9 353 aa16.23■□□□□ 0.19
SHROOM1-208ENST00000617339 TFRCP02786 760 aaKnown RBP16.23■□□□□ 0.19
SHROOM1-208ENST00000617339 ACTN2P35609 894 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 237.8 ms