RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CABYRO75952 493 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 MAGEB6Q8N7X4 407 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 OTUD5Q96G74 571 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 RIPOR3Q96MK2 946 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 MCCC1Q96RQ3 725 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 RNF208Q9H0X6 261 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 NUP98P52948 1817 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 COL16A1Q07092 1604 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 CERKLQ49MI3 558 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 CHST3Q7LGC8 479 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 CACNA2D4Q7Z3S7 1137 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 OR6J1Q8NGC5 347 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 SPATA31A1Q5TZJ5 1347 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 OPLAHO14841 1288 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 CCDC192P0DO97 292 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 NBPF12Q5TAG4 269 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 CLEC4GQ6UXB4 293 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 NSMFQ6X4W1 530 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 LUZP1Q86V48 1076 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 KIAA0825Q8IV33 1275 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 CMTR1Q8N1G2 835 aaKnown RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 IWS1Q96ST2 819 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 CNOT7Q9UIV1 285 aaKnown RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 AKT3Q9Y243 479 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 SP3Q02447 781 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 TAF11Q15544 211 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 MB21D1Q8N884 522 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 ATL2Q8NHH9 583 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.74□□□□□ -1.813e-6■■■■■ 31.8
LPP-220ENST00000617246 NRBP2Q9NSY0 501 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 IFT57Q9NWB7 429 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 PNPLA6Q8IY17 1366 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 ARHGAP23Q9P227 1491 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 MDM2Q00987 491 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 KPNA6O60684 536 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 GRAPQ13588 217 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 GTF2H3Q13889 308 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 TBC1D10BQ4KMP7 808 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 GRAPLQ8TC17 118 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 PCDHB7Q9Y5E2 793 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 ZNF644Q9H582 1327 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 USP17L5A8MUK1 530 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 RNPC3Q96LT9 517 aaKnown RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 COA1Q9GZY4 146 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 OLFML3Q9NRN5 406 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 CCT6AP40227 531 aaKnown RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 SLC1A4P43007 532 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 MEI1Q5TIA1 1274 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 ZC3H15Q8WU90 426 aaKnown RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 URODP06132 367 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 DRP2Q13474 957 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 THNSL1Q8IYQ7 743 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 TMEM39AQ9NV64 488 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 NCKAP1Q9Y2A7 1128 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 UBN2Q6ZU65 1347 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 LRP5O75197 1615 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 SMARCA5O60264 1052 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 EID3Q8N140 333 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 TBC1D31Q96DN5 1066 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 INTS2Q9H0H0 1204 aaKnown RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 TOPORSQ9NS56 1045 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 NCK2O43639 380 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 CPB1P15086 417 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 TOGARAM2Q6ZUX3 1019 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 CPXCR1Q8N123 301 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 LOC285556D6RIA3 1793 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 VPS37CA5D8V6 355 aaPredicted RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 CAPN8A6NHC0 703 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 TRAPPC10P48553 1259 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 GPC2Q8N158 579 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 PFASO15067 1338 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 PPP1R12AO14974 1030 aaPredicted RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 C6orf222P0C671 652 aaPredicted RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 EFCAB13Q8IY85 973 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 DEPTORQ8TB45 409 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 DNAAF4Q8WXU2 420 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 SCUBE2Q9NQ36 999 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 USTQ9Y2C2 406 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 SUZ12Q15022 739 aaKnown RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 RGMBQ6NW40 437 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 HOMEZQ8IX15 550 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 ACRBPQ8NEB7 543 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 KANSL1LA0AUZ9 987 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 USP17L10C9JJH3 530 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 CES2O00748 559 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 ERN1O75460 977 aaKnown RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 SLC25A27O95847 323 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 IPO4Q8TEX9 1081 aaKnown RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 HOXC10Q9NYD6 342 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 EXOSC9Q06265 439 aaKnown RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 SSRP1Q08945 709 aaKnown RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 LRRC32Q14392 662 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 MYSM1Q5VVJ2 828 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 B4GALNT3Q6L9W6 998 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 C11orf74Q86VG3 221 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 NCOA7Q8NI08 942 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 BBXQ8WY36 941 aaPredicted RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 TEKT3Q9BXF9 490 aa3.73□□□□□ -1.81
LPP-220ENST00000617246 ZSCAN16Q9H4T2 348 aaPredicted RBP3.73□□□□□ -1.81
LPP-220ENST00000617246 NARFQ9UHQ1 456 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms