RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 TRPM7Q96QT4 1865 aa23.27■■□□□ 1.32
CPNE9-205ENST00000613455 GOLGA6L22H0YM25 854 aa23.27■■□□□ 1.32
CPNE9-205ENST00000613455 ITGBL1O95965 494 aaPredicted RBP23.27■■□□□ 1.32
CPNE9-205ENST00000613455 EARS2Q5JPH6 523 aaKnown RBP23.27■■□□□ 1.32
CPNE9-205ENST00000613455 CHADLQ6NUI6 762 aa23.27■■□□□ 1.32
CPNE9-205ENST00000613455 OTUD5Q96G74 571 aa23.27■■□□□ 1.32
CPNE9-205ENST00000613455 USP28Q96RU2 1077 aa23.27■■□□□ 1.32
CPNE9-205ENST00000613455 SMCO2A6NFE2 343 aa23.26■■□□□ 1.31
CPNE9-205ENST00000613455 IRF6O14896 467 aa23.26■■□□□ 1.31
CPNE9-205ENST00000613455 NOM1Q5C9Z4 860 aaKnown RBP23.26■■□□□ 1.31
CPNE9-205ENST00000613455 ATL3Q6DD88 541 aa23.26■■□□□ 1.31
CPNE9-205ENST00000613455 SLF1Q9BQI6 1058 aa23.26■■□□□ 1.31
CPNE9-205ENST00000613455 LMBRD1Q9NUN5 540 aa23.26■■□□□ 1.31
CPNE9-205ENST00000613455 SMCHD1A6NHR9 2005 aa23.26■■□□□ 1.31
CPNE9-205ENST00000613455 FAM205CA6NFA0 338 aa23.25■■□□□ 1.31
CPNE9-205ENST00000613455 UNCXA6NJT0 531 aa23.25■■□□□ 1.31
CPNE9-205ENST00000613455 CELF2O95319 508 aaKnown RBP23.25■■□□□ 1.31
CPNE9-205ENST00000613455 FKBP1BP68106 108 aa23.25■■□□□ 1.31
CPNE9-205ENST00000613455 NBR1Q14596 966 aa23.25■■□□□ 1.31
CPNE9-205ENST00000613455 OPTNQ96CV9 577 aa23.25■■□□□ 1.31
CPNE9-205ENST00000613455 ZNF396Q96N95 335 aaPredicted RBP23.25■■□□□ 1.31
CPNE9-205ENST00000613455 AMNQ9BXJ7 453 aa23.25■■□□□ 1.31
CPNE9-205ENST00000613455 GBA2Q9HCG7 927 aaPredicted RBP23.25■■□□□ 1.31
CPNE9-205ENST00000613455 TMOD4Q9NZQ9 345 aa23.25■■□□□ 1.31
CPNE9-205ENST00000613455 PPIL2Q13356 520 aa23.25■■□□□ 1.31
CPNE9-205ENST00000613455 PRPF38AQ8NAV1 312 aaKnown RBP23.25■■□□□ 1.31
CPNE9-205ENST00000613455 PPP1R9AQ9ULJ8 1098 aa23.25■■□□□ 1.31
CPNE9-205ENST00000613455 KCNH4Q9UQ05 1017 aa23.25■■□□□ 1.31
CPNE9-205ENST00000613455 PCDHA1Q9Y5I3 950 aa23.25■■□□□ 1.31
CPNE9-205ENST00000613455 A0A0G2JLL6 359 aaPredicted RBP23.24■■□□□ 1.31
CPNE9-205ENST00000613455 PRPF40AO75400 957 aaKnown RBP23.24■■□□□ 1.31
CPNE9-205ENST00000613455 FLOT1O75955 427 aa23.24■■□□□ 1.31
CPNE9-205ENST00000613455 TAL1P17542 331 aaPredicted RBP23.24■■□□□ 1.31
CPNE9-205ENST00000613455 GNA11P29992 359 aa23.24■■□□□ 1.31
CPNE9-205ENST00000613455 PRRT2Q7Z6L0 340 aaPredicted RBP23.24■■□□□ 1.31
CPNE9-205ENST00000613455 FBXO11Q86XK2 927 aa23.24■■□□□ 1.31
CPNE9-205ENST00000613455 RASGRP4Q8TDF6 673 aa23.24■■□□□ 1.31
CPNE9-205ENST00000613455 C6orf50Q9HD87 102 aa23.24■■□□□ 1.31
CPNE9-205ENST00000613455 CFAP45Q9UL16 551 aa23.24■■□□□ 1.31
CPNE9-205ENST00000613455 GJA5P36382 358 aa23.23■■□□□ 1.31
CPNE9-205ENST00000613455 TOB1P50616 345 aaPredicted RBP23.23■■□□□ 1.31
CPNE9-205ENST00000613455 SAMD1Q6SPF0 538 aaPredicted RBP23.23■■□□□ 1.31
CPNE9-205ENST00000613455 LEO1Q8WVC0 666 aaPredicted RBP23.23■■□□□ 1.31
CPNE9-205ENST00000613455 SCAND2PQ9GZW5 306 aaPredicted RBP23.23■■□□□ 1.31
CPNE9-205ENST00000613455 PCDHA6Q9UN73 950 aa23.23■■□□□ 1.31
CPNE9-205ENST00000613455 PCDHA8Q9Y5H6 950 aa23.23■■□□□ 1.31
CPNE9-205ENST00000613455 CXCL11O14625 94 aa23.22■■□□□ 1.31
CPNE9-205ENST00000613455 ADCY7P51828 1080 aa23.22■■□□□ 1.31
CPNE9-205ENST00000613455 CEBPZQ03701 1054 aaKnown RBP23.22■■□□□ 1.31
CPNE9-205ENST00000613455 CST9Q5W186 159 aa23.22■■□□□ 1.31
CPNE9-205ENST00000613455 RIC8AQ9NPQ8 531 aa23.22■■□□□ 1.31
CPNE9-205ENST00000613455 RTEL1Q9NZ71 1219 aa23.22■■□□□ 1.31
CPNE9-205ENST00000613455 CLIC4Q9Y696 253 aa23.22■■□□□ 1.31
CPNE9-205ENST00000613455 COL11A1P12107 1806 aaPredicted RBP23.22■■□□□ 1.31
CPNE9-205ENST00000613455 USH1GQ495M9 461 aa23.22■■□□□ 1.31
CPNE9-205ENST00000613455 CCDC174Q6PII3 467 aa23.22■■□□□ 1.31
CPNE9-205ENST00000613455 CATSPERGQ6ZRH7 1159 aa23.22■■□□□ 1.31
CPNE9-205ENST00000613455 SPATA32Q96LK8 384 aa23.22■■□□□ 1.31
CPNE9-205ENST00000613455 GPBP1L1Q9HC44 474 aaPredicted RBP23.22■■□□□ 1.31
CPNE9-205ENST00000613455 POLR3EQ9NVU0 708 aa23.22■■□□□ 1.31
CPNE9-205ENST00000613455 ELP1O95163 1332 aa23.21■■□□□ 1.31
CPNE9-205ENST00000613455 NASPP49321 788 aaPredicted RBP23.21■■□□□ 1.31
CPNE9-205ENST00000613455 RILPL1Q5EBL4 403 aa23.21■■□□□ 1.31
CPNE9-205ENST00000613455 TREML2Q5T2D2 321 aa23.21■■□□□ 1.31
CPNE9-205ENST00000613455 PIK3AP1Q6ZUJ8 805 aa23.21■■□□□ 1.31
CPNE9-205ENST00000613455 C2orf69Q8N8R5 385 aa23.21■■□□□ 1.31
CPNE9-205ENST00000613455 SLC38A10Q9HBR0 1119 aa23.21■■□□□ 1.31
CPNE9-205ENST00000613455 ZNF536O15090 1300 aa23.21■■□□□ 1.31
CPNE9-205ENST00000613455 ANO1Q5XXA6 986 aa23.2■■□□□ 1.3
CPNE9-205ENST00000613455 REXO1Q8N1G1 1221 aaKnown RBP23.2■■□□□ 1.3
CPNE9-205ENST00000613455 PROCA1Q8NCQ7 364 aaPredicted RBP23.2■■□□□ 1.3
CPNE9-205ENST00000613455 BICD2Q8TD16 824 aa23.2■■□□□ 1.3
CPNE9-205ENST00000613455 SLC10A4Q96EP9 437 aa23.2■■□□□ 1.3
CPNE9-205ENST00000613455 RCOR1Q9UKL0 485 aa23.2■■□□□ 1.3
CPNE9-205ENST00000613455 PTMSP20962 102 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 CSPP1Q1MSJ5 1256 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 CUL5Q93034 780 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 ATG4CQ96DT6 458 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 WNK4Q96J92 1243 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 USP17L15C9J2P7 530 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 USP17L13C9JLJ4 530 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 USP17L11C9JVI0 530 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 USP17L18D6R9N7 530 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 USP17L22D6RA61 530 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 USP17L17D6RBQ6 530 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 USP17L19D6RCP7 530 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 USP17L20D6RJB6 530 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 KIF3CO14782 793 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 OPLAHO14841 1288 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 GADD45BO75293 160 aaPredicted RBP23.19■■□□□ 1.3
CPNE9-205ENST00000613455 CLK2P49760 499 aaKnown RBP23.19■■□□□ 1.3
CPNE9-205ENST00000613455 USP17L24Q0WX57 530 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 MOGSQ13724 837 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 LINC00301Q8NCQ3 95 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 PSTPIP2Q9H939 334 aa23.19■■□□□ 1.3
CPNE9-205ENST00000613455 VWA5AO00534 786 aa23.18■■□□□ 1.3
CPNE9-205ENST00000613455 WNT7AO00755 349 aa23.18■■□□□ 1.3
CPNE9-205ENST00000613455 YEATS4O95619 227 aa23.18■■□□□ 1.3
CPNE9-205ENST00000613455 ICAM1P05362 532 aa23.18■■□□□ 1.3
CPNE9-205ENST00000613455 DSG3P32926 999 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms