RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 CYTH3O43739 400 aa8.37□□□□□ -1.07
PPARGC1A-217ENST00000613098 RNF40O75150 1001 aa8.37□□□□□ -1.07
PPARGC1A-217ENST00000613098 DDAH1O94760 285 aa8.37□□□□□ -1.07
PPARGC1A-217ENST00000613098 PLEKP08567 350 aaPredicted RBP8.37□□□□□ -1.07
PPARGC1A-217ENST00000613098 SRGNP10124 158 aa8.37□□□□□ -1.07
PPARGC1A-217ENST00000613098 CREG2Q8IUH2 290 aa8.37□□□□□ -1.07
PPARGC1A-217ENST00000613098 GIMAP8Q8ND71 665 aaPredicted RBP8.37□□□□□ -1.07
PPARGC1A-217ENST00000613098 GDAP1L1Q96MZ0 367 aa8.37□□□□□ -1.07
PPARGC1A-217ENST00000613098 RBM28Q9NW13 759 aaKnown RBP8.37□□□□□ -1.07
PPARGC1A-217ENST00000613098 RNF216Q9NWF9 866 aaPredicted RBP8.37□□□□□ -1.07
PPARGC1A-217ENST00000613098 LAMB1P07942 1786 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 H7C1D1 291 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 SHOX2O60902 331 aaPredicted RBP8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 RHOBTB3O94955 611 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 BMP15O95972 392 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 TRAPPC10P48553 1259 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 TUBB4BP68371 445 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 GPS2Q13227 327 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 TRIM14Q14142 442 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 ARL6IP4Q66PJ3 421 aaKnown RBP8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 SLC51AQ86UW1 340 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 PACS2Q86VP3 889 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 FAM84BQ96KN1 310 aaPredicted RBP8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 HAUS4Q9H6D7 363 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 MKRN1Q9UHC7 482 aaKnown RBP8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 SALL4Q9UJQ4 1053 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 B4DLN1 442 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 EDIL3O43854 480 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 ORC4O43929 436 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 KCNB1Q14721 858 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 CCNI2Q6ZMN8 369 aaPredicted RBP8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 CATIPQ7Z7H3 387 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 SMCR8Q8TEV9 937 aaPredicted RBP8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 COG1Q8WTW3 980 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 NSUN4Q96CB9 384 aaKnown RBP8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 HINFPQ9BQA5 517 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 EHD4Q9H223 541 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 DCP1AQ9NPI6 582 aaPredicted RBP8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 ABCF2Q9UG63 623 aa8.36□□□□□ -1.07
PPARGC1A-217ENST00000613098 GGCXP38435 758 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 CYP27A1Q02318 531 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 ANKRD40Q6AI12 368 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 ZNF572Q7Z3I7 529 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 ZSCAN29Q8IWY8 852 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 AENQ8WTP8 325 aaKnown RBP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 GPKOWQ92917 476 aaPredicted RBP eCLIP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 MED4Q9NPJ6 270 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 PCDHA6Q9UN73 950 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 PCDHA8Q9Y5H6 950 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 SAR1BQ9Y6B6 198 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 TARSL2A2RTX5 802 aaKnown RBP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 ERLIN1O75477 346 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 LONP1P36776 959 aaKnown RBP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 SPAG1Q07617 926 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 STK4Q13043 487 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 ITPK1Q13572 414 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 KRT26Q7Z3Y9 468 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 RASSF4Q9H2L5 321 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 THAP9Q9H5L6 903 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 NHEJ1Q9H9Q4 299 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 RSPH14Q9UHP6 348 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 CAPN6Q9Y6Q1 641 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 GRIN2DO15399 1336 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 IRS2Q9Y4H2 1338 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 EIF3CLB5ME19 914 aaKnown RBP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 XBP1P17861 261 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 RRP36Q96EU6 259 aaKnown RBP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 PLIN2Q99541 437 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 EIF3CQ99613 913 aaKnown RBP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 MMTAG2Q9BU76 263 aaKnown RBP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 DMGDHQ9UI17 866 aaKnown RBP8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 MAD2L2Q9UI95 211 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 DOT1LQ8TEK3 1739 aa8.35□□□□□ -1.07
PPARGC1A-217ENST00000613098 FCER1AP12319 257 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 EEF1GP26641 437 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 CCDC122Q5T0U0 273 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 HPS3Q969F9 1004 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 CCDC102AQ96A19 550 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 JAKMIP2Q96AA8 810 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 CAPZA3Q96KX2 299 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 SELENOOQ9BVL4 669 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 GNL3LQ9NVN8 582 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 ARHGAP20Q9P2F6 1191 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 LUC7L2Q9Y383 392 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 CALM1P0DP23 149 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 CALM2P0DP24 149 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 CALM3P0DP25 149 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 HNRNPH3P31942 346 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 CORO7P57737 925 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 NLRP5P59047 1200 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 MRPS25P82663 173 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 AKAP17AQ02040 695 aaKnown RBP8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 MECOMQ03112 1051 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 C2orf54Q08AI8 447 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 FBXO33Q7Z6M2 555 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 BLIDQ8IZY5 108 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 KIAA0895Q8NCT3 520 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 SH3GL2Q99962 352 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 TUBGCP2Q9BSJ2 902 aa8.34□□□□□ -1.07
PPARGC1A-217ENST00000613098 CCSER1Q9C0I3 900 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms