RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 PRPF38AQ8NAV1 312 aaKnown RBP20.64■□□□□ 0.89
CSNK1E-215ENST00000612795 FAM122AQ96E09 287 aa20.64■□□□□ 0.89
CSNK1E-215ENST00000612795 ZBED9Q6R2W3 1325 aa20.63■□□□□ 0.89
CSNK1E-215ENST00000612795 FGBP02675 491 aa20.63■□□□□ 0.89
CSNK1E-215ENST00000612795 ARMCX2Q7L311 632 aa20.63■□□□□ 0.89
CSNK1E-215ENST00000612795 MICALL1Q8N3F8 863 aa20.63■□□□□ 0.89
CSNK1E-215ENST00000612795 BOLA2Q9H3K6 86 aa20.63■□□□□ 0.89
CSNK1E-215ENST00000612795 HIPK3Q9H422 1215 aa20.63■□□□□ 0.89
CSNK1E-215ENST00000612795 CXXC1Q9P0U4 656 aaPredicted RBP20.63■□□□□ 0.89
CSNK1E-215ENST00000612795 ARPP21Q9UBL0 812 aaPredicted RBP20.63■□□□□ 0.89
CSNK1E-215ENST00000612795 FBXO40Q9UH90 709 aa20.63■□□□□ 0.89
CSNK1E-215ENST00000612795 CHD9Q3L8U1 2897 aa20.62■□□□□ 0.89
CSNK1E-215ENST00000612795 F5H6K3 240 aa20.62■□□□□ 0.89
CSNK1E-215ENST00000612795 NDUFB10O96000 172 aa20.62■□□□□ 0.89
CSNK1E-215ENST00000612795 KLRC3Q07444 240 aa20.62■□□□□ 0.89
CSNK1E-215ENST00000612795 CTR9Q6PD62 1173 aa20.62■□□□□ 0.89
CSNK1E-215ENST00000612795 NOL8Q76FK4 1167 aaKnown RBP20.62■□□□□ 0.89
CSNK1E-215ENST00000612795 KIFC2Q96AC6 838 aa20.62■□□□□ 0.89
CSNK1E-215ENST00000612795 RAVER2Q9HCJ3 691 aaKnown RBP20.62■□□□□ 0.89
CSNK1E-215ENST00000612795 YBX2Q9Y2T7 364 aaKnown RBP20.62■□□□□ 0.89
CSNK1E-215ENST00000612795 ATP2A1O14983 1001 aa20.61■□□□□ 0.89
CSNK1E-215ENST00000612795 CD4P01730 458 aa20.61■□□□□ 0.89
CSNK1E-215ENST00000612795 BEX3Q00994 111 aa20.61■□□□□ 0.89
CSNK1E-215ENST00000612795 PPP2R2DQ66LE6 453 aa20.61■□□□□ 0.89
CSNK1E-215ENST00000612795 OTOP2Q7RTS6 562 aa20.61■□□□□ 0.89
CSNK1E-215ENST00000612795 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.61■□□□□ 0.89
CSNK1E-215ENST00000612795 UBE3CQ15386 1083 aa20.6■□□□□ 0.89
CSNK1E-215ENST00000612795 CXCL17Q6UXB2 119 aa20.6■□□□□ 0.89
CSNK1E-215ENST00000612795 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.6■□□□□ 0.89
CSNK1E-215ENST00000612795 CCDC144CPQ8IYA2 1237 aa20.6■□□□□ 0.89
CSNK1E-215ENST00000612795 STK11IPQ8N1F8 1099 aa20.6■□□□□ 0.89
CSNK1E-215ENST00000612795 CHST13Q8NET6 341 aa20.6■□□□□ 0.89
CSNK1E-215ENST00000612795 FGD4Q96M96 766 aa20.6■□□□□ 0.89
CSNK1E-215ENST00000612795 MKNK2Q9HBH9 465 aa20.6■□□□□ 0.89
CSNK1E-215ENST00000612795 NYAP2Q9P242 653 aa20.6■□□□□ 0.89
CSNK1E-215ENST00000612795 BDP1A6H8Y1 2624 aa20.6■□□□□ 0.89
CSNK1E-215ENST00000612795 UMODL1Q5DID0 1318 aa20.59■□□□□ 0.89
CSNK1E-215ENST00000612795 CCER2I3L3R5 266 aa20.59■□□□□ 0.89
CSNK1E-215ENST00000612795 CHGBP05060 677 aa20.59■□□□□ 0.89
CSNK1E-215ENST00000612795 NECAB3Q96P71 396 aaPredicted RBP20.59■□□□□ 0.89
CSNK1E-215ENST00000612795 C1QTNF1Q9BXJ1 281 aa20.59■□□□□ 0.89
CSNK1E-215ENST00000612795 HOMER2Q9NSB8 354 aa20.59■□□□□ 0.89
CSNK1E-215ENST00000612795 ZBBXA8MT70 800 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 CTAGE5O15320 804 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 CABYRO75952 493 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 RASA1P20936 1047 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 RABGGTBP53611 331 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 CCL23P55773 120 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 TNFAIP2Q03169 654 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 SKIV2LQ15477 1246 aaKnown RBP20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 AAK1Q2M2I8 961 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 ZSCAN25Q6NSZ9 544 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 TLK2Q86UE8 772 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 SLC38A10Q9HBR0 1119 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 SLC4A7Q9Y6M7 1214 aa20.58■□□□□ 0.89
CSNK1E-215ENST00000612795 SCN5AQ14524 2016 aa20.58■□□□□ 0.88
CSNK1E-215ENST00000612795 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.57■□□□□ 0.88
CSNK1E-215ENST00000612795 HMMRO75330 724 aa20.57■□□□□ 0.88
CSNK1E-215ENST00000612795 ATP5JP18859 108 aa20.57■□□□□ 0.88
CSNK1E-215ENST00000612795 ITGA7Q13683 1181 aa20.57■□□□□ 0.88
CSNK1E-215ENST00000612795 HAUS7Q99871 368 aa20.57■□□□□ 0.88
CSNK1E-215ENST00000612795 KATNBL1Q9H079 304 aa20.57■□□□□ 0.88
CSNK1E-215ENST00000612795 PUS7LQ9H0K6 701 aaKnown RBP20.57■□□□□ 0.88
CSNK1E-215ENST00000612795 CLIP2Q9UDT6 1046 aa20.57■□□□□ 0.88
CSNK1E-215ENST00000612795 FEM1BQ9UK73 627 aa20.57■□□□□ 0.88
CSNK1E-215ENST00000612795 ISY1Q9ULR0 285 aaKnown RBP20.57■□□□□ 0.88
CSNK1E-215ENST00000612795 CHD7Q9P2D1 2997 aa20.57■□□□□ 0.88
CSNK1E-215ENST00000612795 OAZ1P54368 228 aa20.56■□□□□ 0.88
CSNK1E-215ENST00000612795 NKX3-2P78367 333 aa20.56■□□□□ 0.88
CSNK1E-215ENST00000612795 CNTN2Q02246 1040 aa20.56■□□□□ 0.88
CSNK1E-215ENST00000612795 FSCN1Q16658 493 aaKnown RBP20.56■□□□□ 0.88
CSNK1E-215ENST00000612795 RPUSD2Q8IZ73 545 aaKnown RBP20.56■□□□□ 0.88
CSNK1E-215ENST00000612795 SLC43A3Q8NBI5 491 aa20.56■□□□□ 0.88
CSNK1E-215ENST00000612795 PANK1Q8TE04 598 aa20.56■□□□□ 0.88
CSNK1E-215ENST00000612795 NOC4LQ9BVI4 516 aaKnown RBP20.56■□□□□ 0.88
CSNK1E-215ENST00000612795 AP5M1Q9H0R1 490 aa20.56■□□□□ 0.88
CSNK1E-215ENST00000612795 ACAD9Q9H845 621 aa20.56■□□□□ 0.88
CSNK1E-215ENST00000612795 PCDHA11Q9Y5I1 949 aa20.56■□□□□ 0.88
CSNK1E-215ENST00000612795 PRRC2BQ5JSZ5 2229 aaKnown RBP20.55■□□□□ 0.88
CSNK1E-215ENST00000612795 ASTN1O14525 1302 aa20.55■□□□□ 0.88
CSNK1E-215ENST00000612795 LCTP09848 1927 aa20.55■□□□□ 0.88
CSNK1E-215ENST00000612795 MINDY4BA8MYZ0 360 aa20.55■□□□□ 0.88
CSNK1E-215ENST00000612795 ZEB2O60315 1214 aa20.55■□□□□ 0.88
CSNK1E-215ENST00000612795 TFF2Q03403 129 aa20.55■□□□□ 0.88
CSNK1E-215ENST00000612795 SEZ6LQ9BYH1 1024 aa20.55■□□□□ 0.88
CSNK1E-215ENST00000612795 WNT8AQ9H1J5 351 aa20.55■□□□□ 0.88
CSNK1E-215ENST00000612795 TANC1Q9C0D5 1861 aa20.55■□□□□ 0.88
CSNK1E-215ENST00000612795 REV3LO60673 3130 aa20.54■□□□□ 0.88
CSNK1E-215ENST00000612795 B4GALT4O60513 344 aa20.54■□□□□ 0.88
CSNK1E-215ENST00000612795 RAB11FIP3O75154 756 aa20.54■□□□□ 0.88
CSNK1E-215ENST00000612795 BMP1P13497 986 aa20.54■□□□□ 0.88
CSNK1E-215ENST00000612795 MYOGP15173 224 aa20.54■□□□□ 0.88
CSNK1E-215ENST00000612795 SBK1Q52WX2 424 aa20.54■□□□□ 0.88
CSNK1E-215ENST00000612795 LRRC47Q8N1G4 583 aaKnown RBP20.54■□□□□ 0.88
CSNK1E-215ENST00000612795 TRPV6Q9H1D0 765 aa20.54■□□□□ 0.88
CSNK1E-215ENST00000612795 COG6Q9Y2V7 657 aa20.54■□□□□ 0.88
CSNK1E-215ENST00000612795 ASB14A6NK59 587 aa20.53■□□□□ 0.88
CSNK1E-215ENST00000612795 GTPBP6O43824 516 aaPredicted RBP20.53■□□□□ 0.88
CSNK1E-215ENST00000612795 ATP2A2P16615 1042 aaKnown RBP20.53■□□□□ 0.88
CSNK1E-215ENST00000612795 KCNQ1P51787 676 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms