RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 FBXO11Q86XK2 927 aa14.64□□□□□ -0.07
TCF3-220ENST00000611869 CNKSR1Q969H4 720 aa14.64□□□□□ -0.07
TCF3-220ENST00000611869 CCDC113Q9H0I3 377 aa14.64□□□□□ -0.07
TCF3-220ENST00000611869 HPS5Q9UPZ3 1129 aa14.64□□□□□ -0.07
TCF3-220ENST00000611869 ST3GAL1Q11201 340 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 GPATCH4Q5T3I0 446 aaKnown RBP14.63□□□□□ -0.07
TCF3-220ENST00000611869 CCDC84Q86UT8 332 aaPredicted RBP14.63□□□□□ -0.07
TCF3-220ENST00000611869 NIM1KQ8IY84 436 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 CCDC17Q96LX7 622 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 PSDA5PKW4 1024 aaPredicted RBP14.63□□□□□ -0.07
TCF3-220ENST00000611869 ARHGEF35A5YM69 484 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 RNASE9P60153 205 aaKnown RBP14.63□□□□□ -0.07
TCF3-220ENST00000611869 SARM1Q6SZW1 724 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 MYOCDQ8IZQ8 938 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 MYCT1Q8N699 235 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 TCHPQ9BT92 498 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 MTA3Q9BTC8 594 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 MRPL44Q9H9J2 332 aaKnown RBP14.63□□□□□ -0.07
TCF3-220ENST00000611869 FAM170AA1A519 330 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 STX10O60499 249 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 DNM2P50570 870 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 PFKFB3Q16875 520 aaPredicted RBP14.63□□□□□ -0.07
TCF3-220ENST00000611869 MAATS1Q7Z4T9 603 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 CSRNP1Q96S65 589 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 UBE2Q2LH0YL09 131 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 CETN2P41208 172 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 GPSM2P81274 684 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 PRKG1Q13976 671 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 UBE2SQ16763 222 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 TMC4Q7Z404 712 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 OGFRQ9NZT2 677 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 FRMD4BQ9Y2L6 1034 aa14.63□□□□□ -0.07
TCF3-220ENST00000611869 CCDC51Q96ER9 411 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 FAM196BA6NMK8 535 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 PRR29P0C7W0 189 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 PLA2G4DQ86XP0 818 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 VSTM4Q8IW00 320 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 GJD4Q96KN9 370 aaPredicted RBP14.62□□□□□ -0.07
TCF3-220ENST00000611869 KIAA1024Q9UPX6 916 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 PCDHB13Q9Y5F0 798 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 RBL2Q08999 1139 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 FAM26FQ5R3K3 315 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 STAG2Q8N3U4 1231 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 LARP4BQ92615 738 aaKnown RBP14.62□□□□□ -0.07
TCF3-220ENST00000611869 COA1Q9GZY4 146 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 GDAQ9Y2T3 454 aa14.62□□□□□ -0.07
TCF3-220ENST00000611869 KIAA0754O94854 1291 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 PLCG1P19174 1290 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 LRRC41Q15345 812 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 SLC9C1Q4G0N8 1177 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 SECISBP2LQ93073 1101 aaKnown RBP14.61□□□□□ -0.07
TCF3-220ENST00000611869 CEP95Q96GE4 821 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 TUBGCP2Q9BSJ2 902 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 SWAP70Q9UH65 585 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 SPATA31A5Q5VU36 1347 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 SPATA31A7Q8IWB4 1347 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 USP17L5A8MUK1 530 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 B4DLN1 442 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 KLRK1P26718 216 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 SRBD1Q8N5C6 995 aaKnown RBP14.61□□□□□ -0.07
TCF3-220ENST00000611869 CCDC169A6NNP5 214 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 TMEM110-MUSTN1A8MSY1 372 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 LAD1O00515 517 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 GAS7O60861 476 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 RCAN1P53805 252 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 CACNB1Q02641 598 aaPredicted RBP14.61□□□□□ -0.07
TCF3-220ENST00000611869 RDH13Q8NBN7 331 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 CHURC1Q8WUH1 139 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 AMNQ9BXJ7 453 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 C3P01024 1663 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 CUL4BQ13620 913 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 ZNF658Q5TYW1 1059 aaPredicted RBP14.61□□□□□ -0.07
TCF3-220ENST00000611869 CNOT6LQ96LI5 555 aaKnown RBP14.61□□□□□ -0.07
TCF3-220ENST00000611869 SELENOOQ9BVL4 669 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 PANK4Q9NVE7 773 aa14.61□□□□□ -0.07
TCF3-220ENST00000611869 MROH7-TTC4A0A0A0MT08 1334 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 KDM3AQ9Y4C1 1321 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 COL5A2P05997 1499 aaPredicted RBP14.6□□□□□ -0.07
TCF3-220ENST00000611869 RAD17O75943 681 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 NEFHP12036 1026 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 USP37Q86T82 979 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 DHX40Q8IX18 779 aaKnown RBP14.6□□□□□ -0.07
TCF3-220ENST00000611869 TSGA10Q9BZW7 698 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 KANSL2Q9H9L4 492 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 GSTTP1A0A1W2PQM5 241 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 NPR1P16066 1061 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 UBXN2AP68543 259 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 IFT81Q8WYA0 676 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 IFIH1Q9BYX4 1025 aaKnown RBP14.6□□□□□ -0.07
TCF3-220ENST00000611869 CALUO43852 315 aaPredicted RBP14.6□□□□□ -0.07
TCF3-220ENST00000611869 KLHL30Q0D2K2 578 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 COL9A3Q14050 684 aaPredicted RBP14.6□□□□□ -0.07
TCF3-220ENST00000611869 VPS72Q15906 364 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 RGS22Q8NE09 1264 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 AK8Q96MA6 479 aa14.6□□□□□ -0.07
TCF3-220ENST00000611869 ORC4O43929 436 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 IQCB1Q15051 598 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 ARL6IP4Q66PJ3 421 aaKnown RBP14.59□□□□□ -0.07
TCF3-220ENST00000611869 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
TCF3-220ENST00000611869 ZFP91Q96JP5 570 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms