RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ACTN4O43707 911 aaKnown RBP9.68□□□□□ -0.86
LIG4-204ENST00000611712 HSF2BPO75031 334 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 ATP2C1P98194 919 aaPredicted RBP9.68□□□□□ -0.86
LIG4-204ENST00000611712 TC2NQ8N9U0 490 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 SLC44A5Q8NCS7 719 aa9.68□□□□□ -0.86
LIG4-204ENST00000611712 FAM217BQ9NTX9 383 aaPredicted RBP9.68□□□□□ -0.86
LIG4-204ENST00000611712 CCDC151A5D8V7 595 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 SPDYE3A6NKU9 549 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 IVLP07476 585 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 PRCPP42785 496 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 ZFYVE27Q5T4F4 411 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 TBC1D9BQ66K14 1250 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 GPR101Q96P66 508 aaPredicted RBP9.67□□□□□ -0.86
LIG4-204ENST00000611712 LEMD3Q9Y2U8 911 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 A0A1B0GTH6 734 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 PP2D1A8MPX8 630 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 LAD1O00515 517 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 ATP8B1O43520 1251 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 NDUFA10O95299 355 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 NTSR2O95665 410 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 PLCG1P19174 1290 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 PRPF4BQ13523 1007 aaKnown RBP9.67□□□□□ -0.86
LIG4-204ENST00000611712 TBCKQ8TEA7 893 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 SH3RF3Q8TEJ3 882 aaPredicted RBP9.67□□□□□ -0.86
LIG4-204ENST00000611712 P2RX5Q93086 422 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 NSUN4Q96CB9 384 aaKnown RBP9.67□□□□□ -0.86
LIG4-204ENST00000611712 DHTKD1Q96HY7 919 aaPredicted RBP9.67□□□□□ -0.86
LIG4-204ENST00000611712 NBPF3Q9H094 633 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 PDE11AQ9HCR9 933 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 TADA3O75528 432 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 ZSCAN20P17040 1043 aaPredicted RBP9.67□□□□□ -0.86
LIG4-204ENST00000611712 DNAJC21Q5F1R6 531 aaKnown RBP9.67□□□□□ -0.86
LIG4-204ENST00000611712 MAATS1Q7Z4T9 603 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 TBC1D22AQ8WUA7 517 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 IFT81Q8WYA0 676 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 HINFPQ9BQA5 517 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 MYO1AQ9UBC5 1043 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 NALCNQ8IZF0 1738 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 VAV2P52735 878 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 RNASE9P60153 205 aaKnown RBP9.67□□□□□ -0.86
LIG4-204ENST00000611712 ITPK1Q13572 414 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 NR1I3Q14994 352 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 VGLL2Q8N8G2 317 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 RGS22Q8NE09 1264 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 PIGSQ96S52 555 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 CUEDC2Q9H467 287 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 ABHD10Q9NUJ1 306 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.67□□□□□ -0.86
LIG4-204ENST00000611712 XDHP47989 1333 aa9.67□□□□□ -0.86
LIG4-204ENST00000611712 ORC4O43929 436 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 SLC9C1Q4G0N8 1177 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 DCAF17Q5H9S7 520 aaPredicted RBP9.66□□□□□ -0.86
LIG4-204ENST00000611712 ANKRD13CQ8N6S4 541 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 AK8Q96MA6 479 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 BCCIPQ9P287 314 aaKnown RBP eCLIP9.66□□□□□ -0.86
LIG4-204ENST00000611712 IFI16Q16666 785 aaKnown RBP9.66□□□□□ -0.86
LIG4-204ENST00000611712 CC2D1AQ6P1N0 951 aaPredicted RBP9.66□□□□□ -0.86
LIG4-204ENST00000611712 DPP8Q6V1X1 898 aaPredicted RBP9.66□□□□□ -0.86
LIG4-204ENST00000611712 SYCP3Q8IZU3 236 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 STAG2Q8N3U4 1231 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 MB21D1Q8N884 522 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 L2HGDHQ9H9P8 463 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 ADD3Q9UEY8 706 aaKnown RBP9.66□□□□□ -0.86
LIG4-204ENST00000611712 THRAP3Q9Y2W1 955 aaKnown RBP9.66□□□□□ -0.86
LIG4-204ENST00000611712 CETN3O15182 167 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 CCNE1P24864 410 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 USP8P40818 1118 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 SLC1A4P43007 532 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 DCCP43146 1447 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 CYP27A1Q02318 531 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 TROAPQ12815 778 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 DPYDQ12882 1025 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 REXO1L1PQ8IX06 675 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 NOX5Q96PH1 765 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 TMEM47Q9BQJ4 181 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 MAGEF1Q9HAY2 307 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 ST7Q9NRC1 585 aa9.66□□□□□ -0.86
LIG4-204ENST00000611712 OPA1O60313 960 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 MYL1P05976 194 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 ATP2B4P23634 1241 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 NCAPH2Q6IBW4 605 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 INTS5Q6P9B9 1019 aaKnown RBP9.65□□□□□ -0.86
LIG4-204ENST00000611712 MYOCDQ8IZQ8 938 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 COA7Q96BR5 231 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 MRPL44Q9H9J2 332 aaKnown RBP9.65□□□□□ -0.86
LIG4-204ENST00000611712 PCDHA12Q9UN75 941 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 MRFAP1Q9Y605 127 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 FXR1P51114 621 aaKnown RBP eCLIP9.65□□□□□ -0.86
LIG4-204ENST00000611712 TCP10Q12799 353 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 SF3B3Q15393 1217 aaKnown RBP9.65□□□□□ -0.86
LIG4-204ENST00000611712 C8orf74Q6P047 294 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 ADGRA1Q86SQ6 560 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 TRIM58Q8NG06 486 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 RPGRIP1Q96KN7 1286 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 THAP9Q9H5L6 903 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 SH3GLB2Q9NR46 395 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 USP40Q9NVE5 1235 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
LIG4-204ENST00000611712 COL5A2P05997 1499 aaPredicted RBP9.65□□□□□ -0.86
LIG4-204ENST00000611712 FOXP2O15409 715 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms