RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 ZNF384Q8TF68 577 aa16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 TTYH3Q9C0H2 523 aa16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 TARSL2A2RTX5 802 aaKnown RBP16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 NKRFO15226 690 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 KRT86O43790 486 aa16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 KLRC4O43908 158 aa16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 PPFIA4O75335 1185 aa16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 TRAPPC10P48553 1259 aa16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 GPKOWQ92917 476 aaPredicted RBP eCLIP16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 PYM1Q9BRP8 204 aaKnown RBP16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 NHEJ1Q9H9Q4 299 aaPredicted RBP16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 COL4A1P02462 1669 aa16.94■□□□□ 0.3
PCDHGB1-202ENST00000611598 USP17L12C9JPN9 530 aa16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 USP17L21D6R901 530 aa16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 TRIM21P19474 475 aaKnown RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 EEF1GP26641 437 aaKnown RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 LONP1P36776 959 aaKnown RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 CORO7P57737 925 aa16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 KRT83P78385 493 aa16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 TTI2Q6NXR4 508 aa16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 CCNI2Q6ZMN8 369 aaPredicted RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 SMCR8Q8TEV9 937 aaPredicted RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 SMARCC1Q92922 1105 aaPredicted RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 SRGNP10124 158 aa16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 EIF5P55010 431 aaKnown RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 MRPS25P82663 173 aaKnown RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 CKAP4Q07065 602 aaKnown RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 EZH2Q15910 746 aaKnown RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 PFKFB3Q16875 520 aaPredicted RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 RASSF8Q8NHQ8 419 aa16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 DUSP9Q99956 384 aaKnown RBP16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 TUBGCP2Q9BSJ2 902 aa16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 CRACR2AQ9BSW2 395 aa16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 TMEM60Q9H2L4 133 aa16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 JADE2Q9NQC1 790 aa16.93■□□□□ 0.3
PCDHGB1-202ENST00000611598 IDEP14735 1019 aa16.92■□□□□ 0.3
PCDHGB1-202ENST00000611598 MCM3P25205 808 aa16.92■□□□□ 0.3
PCDHGB1-202ENST00000611598 HDAC7Q8WUI4 952 aa16.92■□□□□ 0.3
PCDHGB1-202ENST00000611598 THAP9Q9H5L6 903 aa16.92■□□□□ 0.3
PCDHGB1-202ENST00000611598 EFCC1Q9HA90 598 aa16.92■□□□□ 0.3
PCDHGB1-202ENST00000611598 ZNF263O14978 683 aa16.92■□□□□ 0.3
PCDHGB1-202ENST00000611598 ARL6IP4Q66PJ3 421 aaKnown RBP16.92■□□□□ 0.3
PCDHGB1-202ENST00000611598 KRT26Q7Z3Y9 468 aa16.92■□□□□ 0.3
PCDHGB1-202ENST00000611598 ITGB4P16144 1822 aa16.92■□□□□ 0.3
PCDHGB1-202ENST00000611598 PLEKP08567 350 aaPredicted RBP16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 FGRP09769 529 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 CYLC1P35663 651 aaPredicted RBP16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 DNM2P50570 870 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 SLC4A8Q2Y0W8 1093 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 GPIHBP1Q8IV16 184 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 BRIP1Q9BX63 1249 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 EHD4Q9H223 541 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 EXOC1Q9NV70 894 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 MAGEC2Q9UBF1 373 aaPredicted RBP16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 PSMA7O14818 248 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 IL6STP40189 918 aaPredicted RBP16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 TTC31Q49AM3 519 aaPredicted RBP16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 CCDC152Q4G0S7 254 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 TYW1BQ6NUM6 668 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 ZNF662Q6ZS27 426 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 BLIDQ8IZY5 108 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 CSGALNACT2Q8N6G5 542 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 EHBP1Q8NDI1 1231 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 RRP36Q96EU6 259 aaKnown RBP16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 RPGRIP1Q96KN7 1286 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 PURBQ96QR8 312 aaKnown RBP16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 KAT14Q9H8E8 782 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 CACNA1SQ13698 1873 aa16.91■□□□□ 0.3
PCDHGB1-202ENST00000611598 CYP2D6P10635 497 aa16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 TBC1D8BQ0IIM8 1120 aa16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 GIMAP8Q8ND71 665 aaPredicted RBP16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 DRC1Q96MC2 740 aa16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 RABEP2Q9H5N1 569 aa16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 LRWD1Q9UFC0 647 aa16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 BCL9O00512 1426 aa16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 ZNF804BA4D1E1 1349 aa16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 RHOBTB3O94955 611 aa16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 KCNB1Q14721 858 aa16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 PCMTD1Q96MG8 357 aaPredicted RBP16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 CAPN6Q9Y6Q1 641 aa16.9■□□□□ 0.3
PCDHGB1-202ENST00000611598 GOLGA6BA6NDN3 693 aa16.89■□□□□ 0.3
PCDHGB1-202ENST00000611598 DTHD1Q6ZMT9 781 aa16.89■□□□□ 0.3
PCDHGB1-202ENST00000611598 CREG2Q8IUH2 290 aa16.89■□□□□ 0.3
PCDHGB1-202ENST00000611598 AENQ8WTP8 325 aaKnown RBP16.89■□□□□ 0.3
PCDHGB1-202ENST00000611598 ZNHIT6Q9NWK9 470 aaKnown RBP16.89■□□□□ 0.3
PCDHGB1-202ENST00000611598 SMARCAL1Q9NZC9 954 aa16.89■□□□□ 0.3
PCDHGB1-202ENST00000611598 DMGDHQ9UI17 866 aaKnown RBP16.89■□□□□ 0.3
PCDHGB1-202ENST00000611598 DLEC1Q9Y238 1755 aa16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 ANO9A1A5B4 782 aa16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 GOLGA6CA6NDK9 693 aa16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 SHOX2O60902 331 aaPredicted RBP16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 IPO7O95373 1038 aaKnown RBP16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 GOLGA6DP0CG33 693 aa16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 ZBED6P86452 979 aa16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 ANKRD40Q6AI12 368 aa16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 CERS3Q8IU89 383 aa16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 FAM76AQ8TAV0 307 aa16.89■□□□□ 0.29
PCDHGB1-202ENST00000611598 SECISBP2LQ93073 1101 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms