RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 DIS3Q9Y2L1 958 aaKnown RBP20.84■□□□□ 0.93
MUC1-224ENST00000611577 PRUNE2Q8WUY3 3088 aa20.83■□□□□ 0.93
MUC1-224ENST00000611577 TSPY3P0CV98 308 aa20.83■□□□□ 0.93
MUC1-224ENST00000611577 TSPY8P0CW00 308 aa20.83■□□□□ 0.93
MUC1-224ENST00000611577 AKR1A1P14550 325 aa20.83■□□□□ 0.93
MUC1-224ENST00000611577 FOSL2P15408 326 aa20.83■□□□□ 0.93
MUC1-224ENST00000611577 RASA1P20936 1047 aa20.83■□□□□ 0.93
MUC1-224ENST00000611577 COPB2P35606 906 aa20.83■□□□□ 0.93
MUC1-224ENST00000611577 EPHB4P54760 987 aa20.83■□□□□ 0.93
MUC1-224ENST00000611577 RRP12Q5JTH9 1297 aaKnown RBP20.83■□□□□ 0.93
MUC1-224ENST00000611577 RNF41Q9H4P4 317 aaPredicted RBP20.83■□□□□ 0.93
MUC1-224ENST00000611577 ANAPC4Q9UJX5 808 aa20.83■□□□□ 0.93
MUC1-224ENST00000611577 ZNF214Q9UL59 606 aaPredicted RBP20.83■□□□□ 0.93
MUC1-224ENST00000611577 CNPY2Q9Y2B0 182 aa20.83■□□□□ 0.93
MUC1-224ENST00000611577 ZNFX1Q9P2E3 1918 aaKnown RBP20.82■□□□□ 0.92
MUC1-224ENST00000611577 KIAA0355O15063 1070 aa20.82■□□□□ 0.92
MUC1-224ENST00000611577 ZNF865P0CJ78 1059 aaPredicted RBP20.82■□□□□ 0.92
MUC1-224ENST00000611577 RAG1P15918 1043 aa20.82■□□□□ 0.92
MUC1-224ENST00000611577 MFSD6Q6ZSS7 791 aa20.82■□□□□ 0.92
MUC1-224ENST00000611577 ANO2Q9NQ90 1003 aa20.82■□□□□ 0.92
MUC1-224ENST00000611577 U3KPZ7 1027 aaPredicted RBP20.82■□□□□ 0.92
MUC1-224ENST00000611577 SMCHD1A6NHR9 2005 aa20.82■□□□□ 0.92
MUC1-224ENST00000611577 PLXNA1Q9UIW2 1896 aa20.81■□□□□ 0.92
MUC1-224ENST00000611577 TSPY2A6NKD2 308 aa20.81■□□□□ 0.92
MUC1-224ENST00000611577 RANBP6O60518 1105 aaKnown RBP20.81■□□□□ 0.92
MUC1-224ENST00000611577 FPGSQ05932 587 aa20.81■□□□□ 0.92
MUC1-224ENST00000611577 REPS2Q8NFH8 660 aa20.81■□□□□ 0.92
MUC1-224ENST00000611577 TMEM39AQ9NV64 488 aa20.81■□□□□ 0.92
MUC1-224ENST00000611577 ADAMTS4O75173 837 aa20.8■□□□□ 0.92
MUC1-224ENST00000611577 PCP11498 1178 aaKnown RBP20.8■□□□□ 0.92
MUC1-224ENST00000611577 PTH1RQ03431 593 aa20.8■□□□□ 0.92
MUC1-224ENST00000611577 STARD7Q9NQZ5 370 aa20.8■□□□□ 0.92
MUC1-224ENST00000611577 SYNRGQ9UMZ2 1314 aa20.79■□□□□ 0.92
MUC1-224ENST00000611577 TMEM265A0A087WTH1 108 aa20.79■□□□□ 0.92
MUC1-224ENST00000611577 ACLYP53396 1101 aa20.79■□□□□ 0.92
MUC1-224ENST00000611577 TFAP4Q01664 338 aa20.79■□□□□ 0.92
MUC1-224ENST00000611577 AKNAD1Q5T1N1 836 aa20.79■□□□□ 0.92
MUC1-224ENST00000611577 SNRNP48Q6IEG0 339 aaKnown RBP20.79■□□□□ 0.92
MUC1-224ENST00000611577 NUP88Q99567 741 aaPredicted RBP20.79■□□□□ 0.92
MUC1-224ENST00000611577 SLF1Q9BQI6 1058 aa20.79■□□□□ 0.92
MUC1-224ENST00000611577 TSEN34Q9BSV6 310 aaKnown RBP20.79■□□□□ 0.92
MUC1-224ENST00000611577 TEX13BQ9BXU2 312 aa20.79■□□□□ 0.92
MUC1-224ENST00000611577 INCENPQ9NQS7 918 aa20.79■□□□□ 0.92
MUC1-224ENST00000611577 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.79■□□□□ 0.92
MUC1-224ENST00000611577 TTC28Q96AY4 2481 aa20.78■□□□□ 0.92
MUC1-224ENST00000611577 ORC4O43929 436 aa20.78■□□□□ 0.92
MUC1-224ENST00000611577 TBC1D10CQ8IV04 446 aa20.78■□□□□ 0.92
MUC1-224ENST00000611577 MSL3Q8N5Y2 521 aaKnown RBP20.78■□□□□ 0.92
MUC1-224ENST00000611577 STAG1Q8WVM7 1258 aa20.78■□□□□ 0.92
MUC1-224ENST00000611577 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.78■□□□□ 0.92
MUC1-224ENST00000611577 ZHX1Q9UKY1 873 aaPredicted RBP20.78■□□□□ 0.92
MUC1-224ENST00000611577 MYH4Q9Y623 1939 aa20.78■□□□□ 0.92
MUC1-224ENST00000611577 GREB1LQ9C091 1923 aaPredicted RBP20.77■□□□□ 0.92
MUC1-224ENST00000611577 DCDC2CA8MYV0 355 aa20.77■□□□□ 0.92
MUC1-224ENST00000611577 FAAP100Q0VG06 881 aa20.77■□□□□ 0.92
MUC1-224ENST00000611577 PPP4R3BQ5MIZ7 849 aa20.77■□□□□ 0.92
MUC1-224ENST00000611577 ANKRD33Q7Z3H0 272 aa20.77■□□□□ 0.92
MUC1-224ENST00000611577 NUP133Q8WUM0 1156 aa20.77■□□□□ 0.92
MUC1-224ENST00000611577 DDX11Q96FC9 970 aa20.77■□□□□ 0.92
MUC1-224ENST00000611577 TOX2Q96NM4 488 aa20.77■□□□□ 0.92
MUC1-224ENST00000611577 FAM184BQ9ULE4 1060 aa20.77■□□□□ 0.92
MUC1-224ENST00000611577 RBM8AQ9Y5S9 174 aaKnown RBP20.77■□□□□ 0.92
MUC1-224ENST00000611577 SYNGAP1Q96PV0 1343 aa20.77■□□□□ 0.91
MUC1-224ENST00000611577 MOXD2PA6NHM9 499 aa20.76■□□□□ 0.91
MUC1-224ENST00000611577 SLC4A3P48751 1232 aa20.76■□□□□ 0.91
MUC1-224ENST00000611577 NEDD1Q8NHV4 660 aa20.76■□□□□ 0.91
MUC1-224ENST00000611577 ESR2Q92731 530 aa20.76■□□□□ 0.91
MUC1-224ENST00000611577 MAP4K1Q92918 833 aa20.76■□□□□ 0.91
MUC1-224ENST00000611577 RIPK3Q9Y572 518 aa20.76■□□□□ 0.91
MUC1-224ENST00000611577 MYADML2A6NDP7 307 aa20.75■□□□□ 0.91
MUC1-224ENST00000611577 SNAI1O95863 264 aaPredicted RBP20.75■□□□□ 0.91
MUC1-224ENST00000611577 NDUFB10O96000 172 aa20.75■□□□□ 0.91
MUC1-224ENST00000611577 DNAJB2P25686 324 aa20.75■□□□□ 0.91
MUC1-224ENST00000611577 TRDNQ13061 729 aa20.75■□□□□ 0.91
MUC1-224ENST00000611577 KCNA10Q16322 511 aa20.75■□□□□ 0.91
MUC1-224ENST00000611577 KLHDC9Q8NEP7 349 aa20.75■□□□□ 0.91
MUC1-224ENST00000611577 LSG1Q9H089 658 aaKnown RBP20.75■□□□□ 0.91
MUC1-224ENST00000611577 CNNM2Q9H8M5 875 aa20.75■□□□□ 0.91
MUC1-224ENST00000611577 CLIP2Q9UDT6 1046 aa20.75■□□□□ 0.91
MUC1-224ENST00000611577 GTF3C3Q9Y5Q9 886 aa20.75■□□□□ 0.91
MUC1-224ENST00000611577 PLIN4Q96Q06 1357 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.74■□□□□ 0.91
MUC1-224ENST00000611577 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.74■□□□□ 0.91
MUC1-224ENST00000611577 F5H6K3 240 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 TTLL1O95922 423 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 FGRP09769 529 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 KLRC3Q07444 240 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 GRIN2CQ14957 1233 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 MAMDC4Q6UXC1 1216 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 CPXCR1Q8N123 301 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 CEP95Q96GE4 821 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 GLT1D1Q96MS3 346 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 KRT23Q9C075 422 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 NYAP2Q9P242 653 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 STX8Q9UNK0 236 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 CTDP1Q9Y5B0 961 aaPredicted RBP20.74■□□□□ 0.91
MUC1-224ENST00000611577 NEDD4P46934 1319 aa20.74■□□□□ 0.91
MUC1-224ENST00000611577 DNAJC25-GNG10A0A024R161 153 aa20.73■□□□□ 0.91
MUC1-224ENST00000611577 ZBED4O75132 1171 aa20.73■□□□□ 0.91
MUC1-224ENST00000611577 DUSP11O75319 330 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 406 ms