RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TNFRSF10CO14798 259 aa6.58□□□□□ -1.36
SMCHD1-213ENST00000609587 CASP7P55210 303 aa6.58□□□□□ -1.36
SMCHD1-213ENST00000609587 EGR3Q06889 387 aa6.58□□□□□ -1.36
SMCHD1-213ENST00000609587 C19orf47Q8N9M1 422 aaKnown RBP6.58□□□□□ -1.36
SMCHD1-213ENST00000609587 FEZF2Q8TBJ5 459 aa6.58□□□□□ -1.36
SMCHD1-213ENST00000609587 PANK1Q8TE04 598 aa6.58□□□□□ -1.36
SMCHD1-213ENST00000609587 SLC9A7Q96T83 725 aa6.58□□□□□ -1.36
SMCHD1-213ENST00000609587 TRIM55Q9BYV6 548 aa6.58□□□□□ -1.36
SMCHD1-213ENST00000609587 DUSP13Q9UII6 198 aa6.58□□□□□ -1.36
SMCHD1-213ENST00000609587 A0A1W2PQH9 124 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 KLF4O43474 513 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 LRRN2O75325 713 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 SASH1O94885 1247 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 RNF4P78317 190 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 NBPF6Q5VWK0 638 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 TMEM132EQ6IEE7 984 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 OXR1Q8N573 874 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 SHISA4Q96DD7 197 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 BORCS6Q96GS4 357 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 NBPF4Q96M43 638 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 LNPKQ9C0E8 428 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 GPATCH2Q9NW75 528 aa6.57□□□□□ -1.36
SMCHD1-213ENST00000609587 FAM86C2PA6NEL3 165 aa6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 U2SURPO15042 1029 aaKnown RBP6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 ACRP10323 421 aa6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 POLR2BP30876 1174 aaKnown RBP6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 PDE6BP35913 854 aa6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 GALK1P51570 392 aa6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 CHMP4BP1P59074 171 aa6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 RAB33AQ14088 237 aa6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 NBPF12Q5TAG4 269 aaPredicted RBP6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 UNC5AQ6ZN44 842 aa6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 DPH6Q7L8W6 267 aa6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 DACT3Q96B18 629 aaPredicted RBP6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 PCDHA11Q9Y5I1 949 aa6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 SLC12A7Q9Y666 1083 aa6.56□□□□□ -1.36
SMCHD1-213ENST00000609587 ZYXQ15942 572 aaKnown RBP6.55□□□□□ -1.36
SMCHD1-213ENST00000609587 LARP1BQ659C4 914 aaKnown RBP6.55□□□□□ -1.36
SMCHD1-213ENST00000609587 TSPYL5Q86VY4 417 aaPredicted RBP6.55□□□□□ -1.36
SMCHD1-213ENST00000609587 ENOX1Q8TC92 643 aaKnown RBP6.55□□□□□ -1.36
SMCHD1-213ENST00000609587 EBF1Q9UH73 591 aa6.55□□□□□ -1.36
SMCHD1-213ENST00000609587 MBD1Q9UIS9 605 aaPredicted RBP6.55□□□□□ -1.36
SMCHD1-213ENST00000609587 GPR160Q9UJ42 338 aa6.55□□□□□ -1.36
SMCHD1-213ENST00000609587 CLEC3AO75596 197 aa6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 EFEMP2O95967 443 aa6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 AFF3P51826 1226 aaKnown RBP6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 EPHB3P54753 998 aa6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 EFEMP1Q12805 493 aa6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 FXNQ16595 210 aa6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 TMEM192Q8IY95 271 aa6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 SIGLEC10Q96LC7 697 aa6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 DHRS1Q96LJ7 313 aa6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 OSBPL2Q9H1P3 480 aa6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 EPB41L4AQ9HCS5 686 aaPredicted RBP6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 SIRPGQ9P1W8 387 aa6.54□□□□□ -1.36
SMCHD1-213ENST00000609587 LTBP3Q9NS15 1303 aa6.53□□□□□ -1.36
SMCHD1-213ENST00000609587 LTKP29376 864 aa6.53□□□□□ -1.36
SMCHD1-213ENST00000609587 NBPF9Q3BBW0 867 aa6.53□□□□□ -1.36
SMCHD1-213ENST00000609587 CCDC144BQ3MJ40 725 aa6.53□□□□□ -1.36
SMCHD1-213ENST00000609587 CELF2-AS1Q8N7Q2 184 aa6.53□□□□□ -1.36
SMCHD1-213ENST00000609587 SYT8Q8NBV8 401 aa6.53□□□□□ -1.36
SMCHD1-213ENST00000609587 SLC6A18Q96N87 628 aa6.53□□□□□ -1.36
SMCHD1-213ENST00000609587 ADAM7Q9H2U9 754 aa6.53□□□□□ -1.36
SMCHD1-213ENST00000609587 PHAXQ9H814 394 aaKnown RBP6.53□□□□□ -1.36
SMCHD1-213ENST00000609587 ST7Q9NRC1 585 aa6.53□□□□□ -1.36
SMCHD1-213ENST00000609587 IRAK3Q9Y616 596 aa6.53□□□□□ -1.36
SMCHD1-213ENST00000609587 PSPNO60542 156 aa6.52□□□□□ -1.37
SMCHD1-213ENST00000609587 SERINC3Q13530 473 aa6.52□□□□□ -1.37
SMCHD1-213ENST00000609587 DDR2Q16832 855 aa6.52□□□□□ -1.37
SMCHD1-213ENST00000609587 ZDHHC14Q8IZN3 488 aa6.52□□□□□ -1.37
SMCHD1-213ENST00000609587 ZSWIM4Q9H7M6 989 aa6.52□□□□□ -1.37
SMCHD1-213ENST00000609587 SHISA3A0PJX4 238 aa6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 NOTOA8MTQ0 251 aa6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 DDAH1O94760 285 aa6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 PMS1P54277 932 aaKnown RBP6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 NMIQ13287 307 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 VMACQ2NL98 169 aa6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 ERICH6BQ5W0A0 696 aa6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 VHLLQ6RSH7 139 aa6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 C6orf15Q6UXA7 325 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 DAGLBQ8NCG7 672 aa6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 SYTL5Q8TDW5 730 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 MICAL1Q8TDZ2 1067 aa6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 TEPSINQ96N21 525 aa6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 ASCC2Q9H1I8 757 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 SUCOQ9UBS9 1254 aaKnown RBP6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 ZNF214Q9UL59 606 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 PCDHB10Q9UN67 800 aa6.51□□□□□ -1.37
SMCHD1-213ENST00000609587 B2RBV5 119 aa6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 SLC7A5Q01650 507 aa6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 CHRNEQ04844 493 aa6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 BMS1Q14692 1282 aaKnown RBP6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 SNX17Q15036 470 aa6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 NFE2L2Q16236 605 aa6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 CLEC16AQ2KHT3 1053 aa6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 BBS9Q3SYG4 887 aa6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 GNPTABQ3T906 1256 aa6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 FAM178BQ8IXR5 827 aa6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 SP8Q8IXZ3 490 aa6.5□□□□□ -1.37
SMCHD1-213ENST00000609587 MKL1Q969V6 931 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms