RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 WDR46O15213 610 aaKnown RBP16.15■□□□□ 0.18
CTSA-218ENST00000607814 ADAMTS4O75173 837 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 FGAP02671 866 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 TFAP4Q01664 338 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 KCTD2Q14681 263 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 MFSD5Q6N075 450 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 ATG4CQ96DT6 458 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 MMP19Q99542 508 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 IL25Q9H293 177 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 STARD7Q9NQZ5 370 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 FBXO28Q9NVF7 368 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 THEGQ9P2T0 379 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 TBX21Q9UL17 535 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 ADAMTS5Q9UNA0 930 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 CNPY2Q9Y2B0 182 aa16.15■□□□□ 0.18
CTSA-218ENST00000607814 NMT2O60551 498 aa16.14■□□□□ 0.17
CTSA-218ENST00000607814 ZNF865P0CJ78 1059 aaPredicted RBP16.14■□□□□ 0.17
CTSA-218ENST00000607814 ACLYP53396 1101 aa16.14■□□□□ 0.17
CTSA-218ENST00000607814 PPIGQ13427 754 aaKnown RBP eCLIP16.14■□□□□ 0.174e-6■■■■□ 20
CTSA-218ENST00000607814 TMEM132BQ14DG7 1078 aa16.14■□□□□ 0.17
CTSA-218ENST00000607814 ZNF792Q3KQV3 632 aa16.14■□□□□ 0.17
CTSA-218ENST00000607814 FAM83BQ5T0W9 1011 aa16.14■□□□□ 0.17
CTSA-218ENST00000607814 RASIP1Q5U651 963 aa16.14■□□□□ 0.17
CTSA-218ENST00000607814 RIOX2Q8IUF8 465 aa16.14■□□□□ 0.17
CTSA-218ENST00000607814 LRRC47Q8N1G4 583 aaKnown RBP16.14■□□□□ 0.17
CTSA-218ENST00000607814 CEP95Q96GE4 821 aa16.14■□□□□ 0.17
CTSA-218ENST00000607814 DIAPH3Q9NSV4 1193 aa16.14■□□□□ 0.17
CTSA-218ENST00000607814 ELP1O95163 1332 aa16.14■□□□□ 0.17
CTSA-218ENST00000607814 CCDC171Q6TFL3 1326 aa16.14■□□□□ 0.17
CTSA-218ENST00000607814 XIRP2A4UGR9 3374 aa16.13■□□□□ 0.17
CTSA-218ENST00000607814 IGKV6D-41A0A0C4DH26 115 aa16.13■□□□□ 0.17
CTSA-218ENST00000607814 TSPY3P0CV98 308 aa16.13■□□□□ 0.17
CTSA-218ENST00000607814 TSPY8P0CW00 308 aa16.13■□□□□ 0.17
CTSA-218ENST00000607814 PLA2G5P39877 138 aa16.13■□□□□ 0.17
CTSA-218ENST00000607814 MRPS5P82675 430 aaKnown RBP16.13■□□□□ 0.17
CTSA-218ENST00000607814 PDE4BQ07343 736 aa16.13■□□□□ 0.17
CTSA-218ENST00000607814 RRP12Q5JTH9 1297 aaKnown RBP16.13■□□□□ 0.17
CTSA-218ENST00000607814 TTC22Q5TAA0 569 aa16.13■□□□□ 0.17
CTSA-218ENST00000607814 KLHDC9Q8NEP7 349 aa16.13■□□□□ 0.17
CTSA-218ENST00000607814 ADAMTS19Q8TE59 1207 aa16.13■□□□□ 0.17
CTSA-218ENST00000607814 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.13■□□□□ 0.173e-10■□□□□ 10.2
CTSA-218ENST00000607814 PBX4Q9BYU1 374 aa16.13■□□□□ 0.17
CTSA-218ENST00000607814 TOMM22Q9NS69 142 aa16.13■□□□□ 0.17
CTSA-218ENST00000607814 PARP14Q460N5 1801 aa16.12■□□□□ 0.17
CTSA-218ENST00000607814 TRANK1O15050 2925 aa16.12■□□□□ 0.17
CTSA-218ENST00000607814 PLXNA1Q9UIW2 1896 aa16.12■□□□□ 0.17
CTSA-218ENST00000607814 F5H6K3 240 aa16.12■□□□□ 0.17
CTSA-218ENST00000607814 SLC3A2P08195 630 aaKnown RBP16.12■□□□□ 0.17
CTSA-218ENST00000607814 CST5P28325 142 aaPredicted RBP16.12■□□□□ 0.17
CTSA-218ENST00000607814 KLRC3Q07444 240 aa16.12■□□□□ 0.17
CTSA-218ENST00000607814 PSRC1Q6PGN9 363 aaPredicted RBP16.12■□□□□ 0.17
CTSA-218ENST00000607814 GLT1D1Q96MS3 346 aa16.12■□□□□ 0.17
CTSA-218ENST00000607814 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
CTSA-218ENST00000607814 SYNGAP1Q96PV0 1343 aa16.12■□□□□ 0.17
CTSA-218ENST00000607814 SYNRGQ9UMZ2 1314 aa16.12■□□□□ 0.17
CTSA-218ENST00000607814 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
CTSA-218ENST00000607814 NDUFB10O96000 172 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 PGK2P07205 417 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 TAL1P17542 331 aaPredicted RBP16.11■□□□□ 0.17
CTSA-218ENST00000607814 STAT3P40763 770 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 CDK7P50613 346 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 ALX1Q15699 326 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 RAB30Q15771 203 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 TMEM240Q5SV17 173 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
CTSA-218ENST00000607814 TMEM199Q8N511 208 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 IL27Q8NEV9 243 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 NEDD1Q8NHV4 660 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 UHRF1Q96T88 793 aaPredicted RBP16.11■□□□□ 0.17
CTSA-218ENST00000607814 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 GOPCQ9HD26 462 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 MTMR4Q9NYA4 1195 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 NYAP2Q9P242 653 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 FAM184BQ9ULE4 1060 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 MTMR7Q9Y216 660 aa16.11■□□□□ 0.17
CTSA-218ENST00000607814 TSPY2A6NKD2 308 aa16.1■□□□□ 0.17
CTSA-218ENST00000607814 VWA5AO00534 786 aa16.1■□□□□ 0.17
CTSA-218ENST00000607814 DUSP11O75319 330 aaKnown RBP16.1■□□□□ 0.17
CTSA-218ENST00000607814 KCNA10Q16322 511 aa16.1■□□□□ 0.17
CTSA-218ENST00000607814 MAMDC4Q6UXC1 1216 aa16.1■□□□□ 0.17
CTSA-218ENST00000607814 C16orf59Q7L2K0 433 aa16.1■□□□□ 0.17
CTSA-218ENST00000607814 RASGRP2Q7LDG7 609 aa16.1■□□□□ 0.17
CTSA-218ENST00000607814 PCSK9Q8NBP7 692 aaKnown RBP16.1■□□□□ 0.17
CTSA-218ENST00000607814 PRDM12Q9H4Q4 367 aa16.1■□□□□ 0.17
CTSA-218ENST00000607814 IL17RBQ9NRM6 502 aa16.1■□□□□ 0.17
CTSA-218ENST00000607814 ZNF214Q9UL59 606 aaPredicted RBP16.1■□□□□ 0.17
CTSA-218ENST00000607814 ISY1Q9ULR0 285 aaKnown RBP16.1■□□□□ 0.17
CTSA-218ENST00000607814 SLC4A3P48751 1232 aa16.09■□□□□ 0.17
CTSA-218ENST00000607814 TBC1D10CQ8IV04 446 aa16.09■□□□□ 0.17
CTSA-218ENST00000607814 PPM1EQ8WY54 764 aa16.09■□□□□ 0.17
CTSA-218ENST00000607814 FAM122AQ96E09 287 aa16.09■□□□□ 0.17
CTSA-218ENST00000607814 TSPYL2Q9H2G4 693 aaPredicted RBP16.09■□□□□ 0.17
CTSA-218ENST00000607814 MTIF3Q9H2K0 278 aaKnown RBP16.09■□□□□ 0.17
CTSA-218ENST00000607814 SPC25Q9HBM1 224 aa16.09■□□□□ 0.17
CTSA-218ENST00000607814 MSRAQ9UJ68 235 aa16.09■□□□□ 0.17
CTSA-218ENST00000607814 ANAPC4Q9UJX5 808 aa16.09■□□□□ 0.17
CTSA-218ENST00000607814 PPP1R9AQ9ULJ8 1098 aa16.09■□□□□ 0.17
CTSA-218ENST00000607814 STX8Q9UNK0 236 aa16.09■□□□□ 0.17
CTSA-218ENST00000607814 COL11A1P12107 1806 aaPredicted RBP16.09■□□□□ 0.17
CTSA-218ENST00000607814 GREB1LQ9C091 1923 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms