RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 USP17L11C9JVI0 530 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 USP17L18D6R9N7 530 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 USP17L22D6RA61 530 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 USP17L17D6RBQ6 530 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 USP17L19D6RCP7 530 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 USP17L20D6RJB6 530 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 TOMM70O94826 608 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 DSG3P32926 999 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 FOSBP53539 338 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 USP17L24Q0WX57 530 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 IKQ13123 557 aaPredicted RBP18.99■□□□□ 0.63
PMF1-206ENST00000606952 ATL3Q6DD88 541 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 HEATR3Q7Z4Q2 680 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 AMNQ9BXJ7 453 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 FBXO28Q9NVF7 368 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 ISY1Q9ULR0 285 aaKnown RBP18.99■□□□□ 0.63
PMF1-206ENST00000606952 PCDHA4Q9UN74 947 aa18.99■□□□□ 0.63
PMF1-206ENST00000606952 BAG4O95429 457 aaKnown RBP18.98■□□□□ 0.63
PMF1-206ENST00000606952 KRT2P35908 639 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 SNAPC2Q13487 334 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 LBX2Q6XYB7 198 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 FASTKD5Q7L8L6 764 aaKnown RBP18.98■□□□□ 0.63
PMF1-206ENST00000606952 FERMT3Q86UX7 667 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 FBXO11Q86XK2 927 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 REPS2Q8NFH8 660 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 PIBF1Q8WXW3 757 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 KIFC2Q96AC6 838 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 TANGO6Q9C0B7 1094 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 GLT8D2Q9H1C3 349 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 SLC38A10Q9HBR0 1119 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 BRMS1Q9HCU9 246 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 AGTPBP1Q9UPW5 1226 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 ZNF536O15090 1300 aa18.98■□□□□ 0.63
PMF1-206ENST00000606952 SMCHD1A6NHR9 2005 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 BTBD18B2RXH4 712 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 ATP2A1O14983 1001 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 FLOT1O75955 427 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 GNA11P29992 359 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 OAZ1P54368 228 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 NAPAP54920 295 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 NLRP5P59047 1200 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 FSTL1Q12841 308 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 COG2Q14746 738 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 SPRYD7Q5W111 196 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 NOSTRINQ8IVI9 506 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 BLIDQ8IZY5 108 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 GBP4Q96PP9 640 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 SLC45A1Q9Y2W3 748 aa18.97■□□□□ 0.63
PMF1-206ENST00000606952 VWA5AO00534 786 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 ICAM1P05362 532 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 TREML2Q5T2D2 321 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 FOXD4L5Q5VV16 416 aaPredicted RBP18.96■□□□□ 0.63
PMF1-206ENST00000606952 MYSM1Q5VVJ2 828 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 MCTP1Q6DN14 999 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 SAPCD2Q86UD0 394 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 BICD2Q8TD16 824 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 FOXD4L4Q8WXT5 416 aaPredicted RBP18.96■□□□□ 0.63
PMF1-206ENST00000606952 COA7Q96BR5 231 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 HHIPL1Q96JK4 782 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 MS4A4AQ96JQ5 239 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 C6orf50Q9HD87 102 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 RIC8AQ9NPQ8 531 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 TLL2Q9Y6L7 1015 aa18.96■□□□□ 0.63
PMF1-206ENST00000606952 SMCO2A6NFE2 343 aa18.95■□□□□ 0.62
PMF1-206ENST00000606952 SPDYE16A6NNV3 312 aaPredicted RBP18.95■□□□□ 0.62
PMF1-206ENST00000606952 CLK2P49760 499 aaKnown RBP18.95■□□□□ 0.62
PMF1-206ENST00000606952 GTF2A2P52657 109 aa18.95■□□□□ 0.62
PMF1-206ENST00000606952 HUNKP57058 714 aa18.95■□□□□ 0.62
PMF1-206ENST00000606952 GHRHRQ02643 423 aa18.95■□□□□ 0.62
PMF1-206ENST00000606952 GPAT2Q6NUI2 795 aa18.95■□□□□ 0.62
PMF1-206ENST00000606952 OXER1Q8TDS5 423 aa18.95■□□□□ 0.62
PMF1-206ENST00000606952 HOXC10Q9NYD6 342 aa18.95■□□□□ 0.62
PMF1-206ENST00000606952 PCDHA1Q9Y5I3 950 aa18.95■□□□□ 0.62
PMF1-206ENST00000606952 ABCB11O95342 1321 aa18.95■□□□□ 0.62
PMF1-206ENST00000606952 TESPA1A2RU30 521 aaPredicted RBP18.94■□□□□ 0.62
PMF1-206ENST00000606952 CETPP11597 493 aa18.94■□□□□ 0.62
PMF1-206ENST00000606952 ADCY7P51828 1080 aa18.94■□□□□ 0.62
PMF1-206ENST00000606952 NR5A1Q13285 461 aa18.94■□□□□ 0.62
PMF1-206ENST00000606952 PABPC4Q13310 644 aaKnown RBP eCLIP18.94■□□□□ 0.624e-10■□□□□ 10.1
PMF1-206ENST00000606952 RASAL3Q86YV0 1011 aa18.94■□□□□ 0.62
PMF1-206ENST00000606952 TMEM87AQ8NBN3 555 aa18.94■□□□□ 0.62
PMF1-206ENST00000606952 ATG4CQ96DT6 458 aa18.94■□□□□ 0.62
PMF1-206ENST00000606952 MAF1Q9H063 256 aa18.94■□□□□ 0.62
PMF1-206ENST00000606952 OPLAHO14841 1288 aa18.93■□□□□ 0.62
PMF1-206ENST00000606952 DNM1Q05193 864 aaKnown RBP18.93■□□□□ 0.62
PMF1-206ENST00000606952 MCTP2Q6DN12 878 aa18.93■□□□□ 0.62
PMF1-206ENST00000606952 GADL1Q6ZQY3 521 aa18.93■□□□□ 0.62
PMF1-206ENST00000606952 SAMD3Q8N6K7 520 aa18.93■□□□□ 0.62
PMF1-206ENST00000606952 MB21D1Q8N884 522 aa18.93■□□□□ 0.62
PMF1-206ENST00000606952 ZNF396Q96N95 335 aaPredicted RBP18.93■□□□□ 0.62
PMF1-206ENST00000606952 ZNF214Q9UL59 606 aaPredicted RBP18.93■□□□□ 0.62
PMF1-206ENST00000606952 PCDHA6Q9UN73 950 aa18.93■□□□□ 0.62
PMF1-206ENST00000606952 PCDHA8Q9Y5H6 950 aa18.93■□□□□ 0.62
PMF1-206ENST00000606952 MORC2Q9Y6X9 1032 aaPredicted RBP18.93■□□□□ 0.62
PMF1-206ENST00000606952 PIK3CDO00329 1044 aa18.92■□□□□ 0.62
PMF1-206ENST00000606952 ADAMTS3O15072 1205 aa18.92■□□□□ 0.62
PMF1-206ENST00000606952 ZBED4O75132 1171 aa18.92■□□□□ 0.62
PMF1-206ENST00000606952 TRAPPC10P48553 1259 aa18.92■□□□□ 0.62
PMF1-206ENST00000606952 MRPL12P52815 198 aaKnown RBP18.92■□□□□ 0.62
PMF1-206ENST00000606952 SNAP25P60880 206 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms