RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 GPR75-ASB3A0A0A6YYF3 556 aa7.89□□□□□ -1.15
CDC40-207ENST00000606893 UBASH3AP57075 661 aa7.89□□□□□ -1.15
CDC40-207ENST00000606893 RAD51AP2Q09MP3 1159 aa7.89□□□□□ -1.15
CDC40-207ENST00000606893 RRP1BQ14684 758 aaKnown RBP7.89□□□□□ -1.15
CDC40-207ENST00000606893 ALX1Q15699 326 aa7.89□□□□□ -1.15
CDC40-207ENST00000606893 USP17L2Q6R6M4 530 aa7.89□□□□□ -1.15
CDC40-207ENST00000606893 CATIPQ7Z7H3 387 aa7.89□□□□□ -1.15
CDC40-207ENST00000606893 OSBPL5Q9H0X9 879 aaPredicted RBP7.89□□□□□ -1.15
CDC40-207ENST00000606893 ZBTB43O43298 467 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 HNRNPH2P55795 449 aaKnown RBP7.88□□□□□ -1.15
CDC40-207ENST00000606893 MTF1Q14872 753 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 STX1AQ16623 288 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 IFIT1BQ5T764 474 aaKnown RBP7.88□□□□□ -1.15
CDC40-207ENST00000606893 CLEC17AQ6ZS10 378 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 ZNF784Q8NCA9 323 aaPredicted RBP7.88□□□□□ -1.15
CDC40-207ENST00000606893 TMEM87BQ96K49 555 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 ADARB2Q9NS39 739 aaKnown RBP7.88□□□□□ -1.15
CDC40-207ENST00000606893 FAM205AQ6ZU69 1335 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 IBSPP21815 317 aaPredicted RBP7.88□□□□□ -1.15
CDC40-207ENST00000606893 SNW1Q13573 536 aaKnown RBP7.88□□□□□ -1.15
CDC40-207ENST00000606893 WWC2Q6AWC2 1192 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 CTCFLQ8NI51 663 aaPredicted RBP7.88□□□□□ -1.15
CDC40-207ENST00000606893 ANKRD7Q92527 254 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 ZDHHC15Q96MV8 337 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 MYO3BQ8WXR4 1341 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 POTECB2RU33 542 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 HUNKP57058 714 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 GNG11P61952 73 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 TSGA10IPQ3SY00 556 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 CCDC178Q5BJE1 867 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 MYSM1Q5VVJ2 828 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 HOMEZQ8IX15 550 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 AGBL3Q8NEM8 1001 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 CEP95Q96GE4 821 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 KAT14Q9H8E8 782 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 ANO10Q9NW15 660 aa7.88□□□□□ -1.15
CDC40-207ENST00000606893 V9GY48 417 aaPredicted RBP7.88□□□□□ -1.15
CDC40-207ENST00000606893 BAZ2AQ9UIF9 1905 aaKnown RBP7.87□□□□□ -1.15
CDC40-207ENST00000606893 VWA3AA6NCI4 1184 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 SORBS3O60504 671 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 PCP11498 1178 aaKnown RBP7.87□□□□□ -1.15
CDC40-207ENST00000606893 XBP1P17861 261 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 MCM7P33993 719 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 SAFBQ15424 915 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDC40-207ENST00000606893 GADL1Q6ZQY3 521 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 NOC3LQ8WTT2 800 aaKnown RBP7.87□□□□□ -1.15
CDC40-207ENST00000606893 EPSTI1Q96J88 318 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 GMLQ99445 158 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 PAGR1Q9BTK6 254 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 ZNF341Q9BYN7 854 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 NBPF3Q9H094 633 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 YY1AP1Q9H869 796 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 FBXO28Q9NVF7 368 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 SERTAD1Q9UHV2 236 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 SALL1Q9NSC2 1324 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 TRIM66O15016 1216 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 SSBP05455 408 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDC40-207ENST00000606893 MATR3P43243 847 aaKnown RBP eCLIP7.87□□□□□ -1.152e-6■■■■□ 23.9
CDC40-207ENST00000606893 TNNI2P48788 182 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 HMGCS2P54868 508 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 ANTXR2P58335 489 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 FAM160A1Q05DH4 1040 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 USH1GQ495M9 461 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 LRRC8AQ8IWT6 810 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 DIS3L2Q8IYB7 885 aaKnown RBP7.87□□□□□ -1.15
CDC40-207ENST00000606893 GPKOWQ92917 476 aaPredicted RBP eCLIP7.87□□□□□ -1.151e-7■■□□□ 13.9
CDC40-207ENST00000606893 CARD6Q9BX69 1037 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 TANGO6Q9C0B7 1094 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 VPS16Q9H269 839 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 SAMSN1Q9NSI8 373 aaKnown RBP7.87□□□□□ -1.15
CDC40-207ENST00000606893 SERPINA10Q9UK55 444 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 PCDHB6Q9Y5E3 794 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 PCDHA5Q9Y5H7 936 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 TNKSO95271 1327 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 DUOX1Q9NRD9 1551 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 ZMYND10O75800 440 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 CHMP4BP1P59074 171 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 NCBP1Q09161 790 aaKnown RBP7.87□□□□□ -1.15
CDC40-207ENST00000606893 ABCB5Q2M3G0 1257 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 DNAJC21Q5F1R6 531 aaKnown RBP7.87□□□□□ -1.15
CDC40-207ENST00000606893 ANO1Q5XXA6 986 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 TTBK2Q6IQ55 1244 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 C10orf67Q8IYJ2 551 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 KIFC2Q96AC6 838 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 ZHX3Q9H4I2 956 aa7.87□□□□□ -1.15
CDC40-207ENST00000606893 IQCA1LA6NCM1 817 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 PPP1R12BO60237 982 aaPredicted RBP7.86□□□□□ -1.15
CDC40-207ENST00000606893 RHOXF2BP0C7M4 288 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 TOP1P11387 765 aaKnown RBP7.86□□□□□ -1.15
CDC40-207ENST00000606893 PPP4CP60510 307 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 ARHGAP29Q52LW3 1261 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 C12orf60Q5U649 245 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 CCDC174Q6PII3 467 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 HHIPL2Q6UWX4 724 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 RHOXF2Q9BQY4 288 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 FUCA2Q9BTY2 467 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 DNAJC18Q9H819 358 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 PI4KBQ9UBF8 816 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 LAMA3Q16787 3333 aa7.86□□□□□ -1.15
CDC40-207ENST00000606893 KIF5BP33176 963 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms