RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 KATNBL1Q9H079 304 aa12.58□□□□□ -0.4
TUBE1-210ENST00000604967 LSG1Q9H089 658 aaKnown RBP12.58□□□□□ -0.4
TUBE1-210ENST00000604967 RANBP17Q9H2T7 1088 aaKnown RBP12.58□□□□□ -0.4
TUBE1-210ENST00000604967 RAD50Q92878 1312 aa12.58□□□□□ -0.4
TUBE1-210ENST00000604967 PCP11498 1178 aaKnown RBP12.57□□□□□ -0.4
TUBE1-210ENST00000604967 OAZ1P54368 228 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 ANTXR2P58335 489 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 KCTD2Q14681 263 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 LRRC26Q2I0M4 334 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 CCDC96Q2M329 555 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 TMEM63BQ5T3F8 832 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 FAM160B2Q86V87 743 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 FAM133AQ8N9E0 248 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 ANKLE1Q8NAG6 615 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 ESR2Q92731 530 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 MAP4K1Q92918 833 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 ZSCAN10Q96SZ4 725 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-210ENST00000604967 PRO3102Q9H379 93 aa12.57□□□□□ -0.4
TUBE1-210ENST00000604967 A1CFQ9NQ94 594 aaKnown RBP12.57□□□□□ -0.4
TUBE1-210ENST00000604967 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-210ENST00000604967 ISY1Q9ULR0 285 aaKnown RBP12.57□□□□□ -0.4
TUBE1-210ENST00000604967 COLQQ9Y215 455 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-210ENST00000604967 SZT2Q5T011 3432 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 NFIBO00712 420 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 SEPT4O43236 478 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 CNGA1P29973 690 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 IMMTQ16891 758 aaKnown RBP12.56□□□□□ -0.4
TUBE1-210ENST00000604967 GJC2Q5T442 439 aaPredicted RBP12.56□□□□□ -0.4
TUBE1-210ENST00000604967 SYDE2Q5VT97 1194 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 MAMDC4Q6UXC1 1216 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 CENPQQ7L2Z9 268 aaPredicted RBP12.56□□□□□ -0.4
TUBE1-210ENST00000604967 NECAB2Q7Z6G3 386 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 DGKHQ86XP1 1220 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 CHURC1Q8WUH1 139 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 CLEC4DQ8WXI8 215 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 DPF3Q92784 378 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 TTC14Q96N46 770 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 UBA5Q9GZZ9 404 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 RNF41Q9H4P4 317 aaPredicted RBP12.56□□□□□ -0.4
TUBE1-210ENST00000604967 C11orf49Q9H6J7 331 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 RNF146Q9NTX7 359 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 DIS3Q9Y2L1 958 aaKnown RBP12.56□□□□□ -0.4
TUBE1-210ENST00000604967 TNKSO95271 1327 aa12.56□□□□□ -0.4
TUBE1-210ENST00000604967 MYADML2A6NDP7 307 aa12.55□□□□□ -0.4
TUBE1-210ENST00000604967 E7EWF7 191 aa12.55□□□□□ -0.4
TUBE1-210ENST00000604967 ICAM1P05362 532 aa12.55□□□□□ -0.4
TUBE1-210ENST00000604967 ALAS1P13196 640 aa12.55□□□□□ -0.4
TUBE1-210ENST00000604967 IKQ13123 557 aaPredicted RBP12.55□□□□□ -0.4
TUBE1-210ENST00000604967 CHST3Q7LGC8 479 aa12.55□□□□□ -0.4
TUBE1-210ENST00000604967 STAG2Q8N3U4 1231 aa12.55□□□□□ -0.4
TUBE1-210ENST00000604967 PNMA1Q8ND90 353 aa12.55□□□□□ -0.4
TUBE1-210ENST00000604967 CHST13Q8NET6 341 aa12.55□□□□□ -0.4
TUBE1-210ENST00000604967 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
TUBE1-210ENST00000604967 ESYT1Q9BSJ8 1104 aa12.55□□□□□ -0.4
TUBE1-210ENST00000604967 RBM8AQ9Y5S9 174 aaKnown RBP12.55□□□□□ -0.4
TUBE1-210ENST00000604967 MCM3APO60318 1980 aa12.55□□□□□ -0.4
TUBE1-210ENST00000604967 LRRC37A2A6NM11 1700 aa12.54□□□□□ -0.4
TUBE1-210ENST00000604967 LAMA3Q16787 3333 aa12.54□□□□□ -0.4
TUBE1-210ENST00000604967 COPB2P35606 906 aa12.54□□□□□ -0.4
TUBE1-210ENST00000604967 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
TUBE1-210ENST00000604967 TBC1D5Q92609 795 aa12.54□□□□□ -0.4
TUBE1-210ENST00000604967 CYP39A1Q9NYL5 469 aa12.54□□□□□ -0.4
TUBE1-210ENST00000604967 CTNNA3Q9UI47 895 aa12.54□□□□□ -0.4
TUBE1-210ENST00000604967 CCPG1Q9ULG6 757 aa12.54□□□□□ -0.4
TUBE1-210ENST00000604967 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-210ENST00000604967 CTAGE5O15320 804 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 PPP1R11O60927 126 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-210ENST00000604967 PGK1P00558 417 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 LRRC41Q15345 812 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 BMP2KLQ5H9B9 411 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 HABP4Q5JVS0 413 aaKnown RBP12.53□□□□□ -0.4
TUBE1-210ENST00000604967 SLC30A10Q6XR72 485 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 ARMCX2Q7L311 632 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 MB21D2Q8IYB1 491 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-210ENST00000604967 C7orf61Q8IZ16 206 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 ANKRD35Q8N283 1001 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 DDX11Q96FC9 970 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 HTATIP2Q9BUP3 242 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 ACAD9Q9H845 621 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-210ENST00000604967 ZMYND8Q9ULU4 1186 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-210ENST00000604967 TRIOBPQ9H2D6 2365 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 SYNGAP1Q96PV0 1343 aa12.53□□□□□ -0.4
TUBE1-210ENST00000604967 OPLAHO14841 1288 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 ADAMTS4O75173 837 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 FDX1P10109 184 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 SYN1P17600 705 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 ATN1P54259 1190 aaPredicted RBP12.52□□□□□ -0.41
TUBE1-210ENST00000604967 BAATQ14032 418 aaPredicted RBP12.52□□□□□ -0.41
TUBE1-210ENST00000604967 NECTIN1Q15223 517 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 CCSAPQ6IQ19 270 aaPredicted RBP12.52□□□□□ -0.41
TUBE1-210ENST00000604967 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 ZNF467Q7Z7K2 595 aaPredicted RBP12.52□□□□□ -0.41
TUBE1-210ENST00000604967 ADGRF4Q8IZF3 695 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 IGDCC4Q8TDY8 1250 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 RUFY2Q8WXA3 655 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 KRT23Q9C075 422 aa12.52□□□□□ -0.41
TUBE1-210ENST00000604967 SENP6Q9GZR1 1112 aaPredicted RBP12.52□□□□□ -0.41
TUBE1-210ENST00000604967 JMJD4Q9H9V9 463 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms