RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PCDHA8Q9Y5H6 950 aa14.05□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 SRPRBQ9Y5M8 271 aaKnown RBP14.05□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 GOLGA6L3A6NEY3 463 aa14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 GLTPD2A6NH11 291 aa14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 VEGFAP15692 232 aaPredicted RBP14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 MRPL12P52815 198 aaKnown RBP14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 ATP2C1P98194 919 aaPredicted RBP14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 NONOQ15233 471 aaKnown RBP eCLIP14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 CDC37Q16543 378 aaPredicted RBP14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 NBPF12Q5TAG4 269 aaPredicted RBP14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 TTBK2Q6IQ55 1244 aa14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 CCAR1Q8IX12 1150 aaKnown RBP14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 CUL5Q93034 780 aa14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 DCPSQ96C86 337 aaKnown RBP14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 AMNQ9BXJ7 453 aa14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 HPSEQ9Y251 543 aa14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 ASTN2O75129 1339 aaPredicted RBP14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 COL11A1P12107 1806 aaPredicted RBP14.04□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 USP17L10C9JJH3 530 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 LIG1P18858 919 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 PRPHP41219 470 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 ECE1P42892 770 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 CLK2P49760 499 aaKnown RBP14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 MRE11P49959 708 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 AP3B2Q13367 1082 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 SNW1Q13573 536 aaKnown RBP14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 GPR162Q16538 588 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 QRICH1Q2TAL8 776 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 RESP18Q5W5W9 173 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 PIK3AP1Q6ZUJ8 805 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 FMR1NBQ8N0W7 255 aaPredicted RBP14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 SAMD3Q8N6K7 520 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 FSIP1Q8NA03 581 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 ACER1Q8TDN7 264 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 KLRG1Q96E93 195 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 C12orf42Q96LP6 360 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 PYM1Q9BRP8 204 aaKnown RBP14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 MAF1Q9H063 256 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 RANBP17Q9H2T7 1088 aaKnown RBP14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 DACT1Q9NYF0 836 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 FBXO2Q9UK22 296 aaPredicted RBP14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 PCDHB6Q9Y5E3 794 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 A0A0G2JMZ2 1700 aa14.03□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 SMCHD1A6NHR9 2005 aa14.02□□□□□ -0.16
NEDD8-MDP1-203ENST00000604306 C19orf81C9J6K1 198 aa14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 TMEM232C9JQI7 657 aa14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 KINO60870 393 aaKnown RBP14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 CAVIN2O95810 425 aa14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 MAP3K11Q16584 847 aa14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 EARS2Q5JPH6 523 aaKnown RBP14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 FBXO11Q86XK2 927 aa14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 SULF1Q8IWU6 871 aa14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.02□□□□□ -0.174e-11■■□□□ 13.5
NEDD8-MDP1-203ENST00000604306 PIBF1Q8WXW3 757 aa14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 CPVLQ9H3G5 476 aa14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 VAT1LQ9HCJ6 419 aa14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PICK1Q9NRD5 415 aa14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PRR12Q9ULL5 1215 aa14.02□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 UNCXA6NJT0 531 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PIK3CDO00329 1044 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PPP1R11O60927 126 aaPredicted RBP14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 NR1I2O75469 434 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 FOSP01100 380 aaPredicted RBP14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 GCFC2P16383 781 aaKnown RBP14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 SLC16A2P36021 539 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 MOXD1Q6UVY6 613 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 NEK8Q86SG6 692 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PNMA8AQ86V59 439 aaPredicted RBP14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 WRNIP1Q96S55 665 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 FEZ1Q99689 392 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 TNMDQ9H2S6 317 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 FAM13BQ9NYF5 915 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 USP25Q9UHP3 1055 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PCDHA1Q9Y5I3 950 aa14.01□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 LOXHD1Q8IVV2 1947 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 ABCB11O95342 1321 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 MYPNQ86TC9 1320 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 SYCE3A1L190 88 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PFKFB1P16118 471 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PTPRAP18433 802 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 EPHX2P34913 555 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 FAM83BQ5T0W9 1011 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 ZNF280CQ8ND82 737 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 RBM46Q8TBY0 533 aaKnown RBP14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 CCDC34Q96HJ3 373 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 FUCA2Q9BTY2 467 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 GOLPH3LQ9H4A5 285 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PSTPIP2Q9H939 334 aa14□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 FAM205CA6NFA0 338 aa13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 RAD21O60216 631 aa13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PPP1R12BO60237 982 aaPredicted RBP13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 CCDC192P0DO97 292 aa13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 MARCKSP29966 332 aaPredicted RBP13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 INPP5BP32019 993 aa13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 NF2P35240 595 aa13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 LONP1P36776 959 aaKnown RBP13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 BACE1P56817 501 aa13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 GHRHRQ02643 423 aa13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 IKQ13123 557 aaPredicted RBP13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PTGDRQ13258 359 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms