RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 RAD17O75943 681 aa17.3■□□□□ 0.36
FGFR2-222ENST00000604236 KRT31Q15323 416 aa17.3■□□□□ 0.36
FGFR2-222ENST00000604236 SLC35F6Q8N357 371 aa17.3■□□□□ 0.36
FGFR2-222ENST00000604236 LRWD1Q9UFC0 647 aa17.3■□□□□ 0.36
FGFR2-222ENST00000604236 PDE4DIPQ5VU43 2346 aa17.3■□□□□ 0.36
FGFR2-222ENST00000604236 SLFN14P0C7P3 912 aa17.3■□□□□ 0.36
FGFR2-222ENST00000604236 CCDC40Q4G0X9 1142 aa17.3■□□□□ 0.36
FGFR2-222ENST00000604236 ZFPM1Q8IX07 1006 aa17.3■□□□□ 0.36
FGFR2-222ENST00000604236 WDR66Q8TBY9 1149 aa17.3■□□□□ 0.36
FGFR2-222ENST00000604236 POLLQ9UGP5 575 aa17.3■□□□□ 0.36
FGFR2-222ENST00000604236 TMCO5BA8MYB1 307 aa17.29■□□□□ 0.36
FGFR2-222ENST00000604236 RNF225M0QZC1 329 aaPredicted RBP17.29■□□□□ 0.36
FGFR2-222ENST00000604236 GLIS3Q8NEA6 775 aa17.29■□□□□ 0.36
FGFR2-222ENST00000604236 BUB1O43683 1085 aa17.29■□□□□ 0.36
FGFR2-222ENST00000604236 CYTH3O43739 400 aa17.29■□□□□ 0.36
FGFR2-222ENST00000604236 AKR1B10O60218 316 aa17.29■□□□□ 0.36
FGFR2-222ENST00000604236 CCDC122Q5T0U0 273 aa17.29■□□□□ 0.36
FGFR2-222ENST00000604236 RAD9BQ6WBX8 426 aa17.29■□□□□ 0.36
FGFR2-222ENST00000604236 NOC4LQ9BVI4 516 aaKnown RBP17.29■□□□□ 0.36
FGFR2-222ENST00000604236 TRAF5O00463 557 aa17.29■□□□□ 0.36
FGFR2-222ENST00000604236 LAMB4A4D0S4 1761 aa17.29■□□□□ 0.36
FGFR2-222ENST00000604236 NKRFO15226 690 aaKnown RBP eCLIP17.28■□□□□ 0.36
FGFR2-222ENST00000604236 ACTN4O43707 911 aaKnown RBP17.28■□□□□ 0.36
FGFR2-222ENST00000604236 MMP10P09238 476 aa17.28■□□□□ 0.36
FGFR2-222ENST00000604236 REXO1Q8N1G1 1221 aaKnown RBP17.28■□□□□ 0.36
FGFR2-222ENST00000604236 RGS22Q8NE09 1264 aa17.28■□□□□ 0.36
FGFR2-222ENST00000604236 CALML4Q96GE6 196 aa17.28■□□□□ 0.36
FGFR2-222ENST00000604236 ARGLU1Q9NWB6 273 aaPredicted RBP17.28■□□□□ 0.36
FGFR2-222ENST00000604236 USP17L10C9JJH3 530 aa17.28■□□□□ 0.36
FGFR2-222ENST00000604236 PRPF3O43395 683 aaKnown RBP17.28■□□□□ 0.36
FGFR2-222ENST00000604236 CFBP00751 764 aa17.28■□□□□ 0.36
FGFR2-222ENST00000604236 SYCP1Q15431 976 aa17.28■□□□□ 0.36
FGFR2-222ENST00000604236 TMC4Q7Z404 712 aa17.28■□□□□ 0.36
FGFR2-222ENST00000604236 ZNHIT6Q9NWK9 470 aaKnown RBP17.28■□□□□ 0.36
FGFR2-222ENST00000604236 DUSP10Q9Y6W6 482 aa17.28■□□□□ 0.36
FGFR2-222ENST00000604236 SPATA31A5Q5VU36 1347 aa17.28■□□□□ 0.36
FGFR2-222ENST00000604236 SPATA31A7Q8IWB4 1347 aa17.28■□□□□ 0.36
FGFR2-222ENST00000604236 TAF1P21675 1872 aa17.28■□□□□ 0.36
FGFR2-222ENST00000604236 PARP4Q9UKK3 1724 aaKnown RBP17.28■□□□□ 0.36
FGFR2-222ENST00000604236 PSMA7O14818 248 aa17.27■□□□□ 0.36
FGFR2-222ENST00000604236 SLC1A4P43007 532 aa17.27■□□□□ 0.36
FGFR2-222ENST00000604236 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.36
FGFR2-222ENST00000604236 MED15Q96RN5 788 aa17.27■□□□□ 0.36
FGFR2-222ENST00000604236 C6orf50Q9HD87 102 aa17.27■□□□□ 0.36
FGFR2-222ENST00000604236 RBM28Q9NW13 759 aaKnown RBP17.27■□□□□ 0.36
FGFR2-222ENST00000604236 LUC7L2Q9Y383 392 aaKnown RBP17.27■□□□□ 0.36
FGFR2-222ENST00000604236 LAMA4Q16363 1823 aa17.27■□□□□ 0.36
FGFR2-222ENST00000604236 IL17AQ16552 155 aa17.27■□□□□ 0.36
FGFR2-222ENST00000604236 DCAF17Q5H9S7 520 aaPredicted RBP17.27■□□□□ 0.36
FGFR2-222ENST00000604236 NEK11Q8NG66 645 aa17.27■□□□□ 0.36
FGFR2-222ENST00000604236 TDRD3Q9H7E2 651 aaKnown RBP17.27■□□□□ 0.36
FGFR2-222ENST00000604236 ARPP21Q9UBL0 812 aaPredicted RBP17.27■□□□□ 0.36
FGFR2-222ENST00000604236 USP8P40818 1118 aa17.27■□□□□ 0.35
FGFR2-222ENST00000604236 PRR16Q569H4 304 aa17.27■□□□□ 0.35
FGFR2-222ENST00000604236 AGPAT5Q9NUQ2 364 aa17.27■□□□□ 0.35
FGFR2-222ENST00000604236 CLCN6P51797 869 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 STK4Q13043 487 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 NONOQ15233 471 aaKnown RBP eCLIP17.26■□□□□ 0.35
FGFR2-222ENST00000604236 KANK3Q6NY19 840 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 FBXO33Q7Z6M2 555 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 C2CD5Q86YS7 1000 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 KSR1Q8IVT5 923 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 PHF20Q9BVI0 1012 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 ATP8A2Q9NTI2 1148 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 ZBTB12Q9Y330 459 aaPredicted RBP17.26■□□□□ 0.35
FGFR2-222ENST00000604236 AFF2P51816 1311 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 GLI3P10071 1580 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 CHMP4BP1P59074 171 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 CALCRLQ16602 461 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 C12orf60Q5U649 245 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 SARM1Q6SZW1 724 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 SAMM50Q9Y512 469 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 LMAN1P49257 510 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 GRAPQ13588 217 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 GRAPLQ8TC17 118 aaPredicted RBP17.26■□□□□ 0.35
FGFR2-222ENST00000604236 XDHP47989 1333 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 CNTNAP5Q8WYK1 1306 aa17.26■□□□□ 0.35
FGFR2-222ENST00000604236 ARHGAP6O43182 974 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 COPB1P53618 953 aaKnown RBP17.25■□□□□ 0.35
FGFR2-222ENST00000604236 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
FGFR2-222ENST00000604236 ALX1Q15699 326 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 HERC4Q5GLZ8 1057 aaPredicted RBP17.25■□□□□ 0.35
FGFR2-222ENST00000604236 SPATA1Q5VX52 437 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 TTC19Q6DKK2 380 aaPredicted RBP17.25■□□□□ 0.35
FGFR2-222ENST00000604236 TC2NQ8N9U0 490 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 ELMO3Q96BJ8 720 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 HPSEQ9Y251 543 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 PLEKHG2Q9H7P9 1386 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 TJP1Q07157 1748 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 CALML3P27482 149 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 PABPC4Q13310 644 aaKnown RBP eCLIP17.25■□□□□ 0.35
FGFR2-222ENST00000604236 RCSD1Q6JBY9 416 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 NUDT12Q9BQG2 462 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 HSD3B7Q9H2F3 369 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 ZBTB22O15209 634 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 PLEKP08567 350 aaPredicted RBP17.25■□□□□ 0.35
FGFR2-222ENST00000604236 IBSPP21815 317 aaPredicted RBP17.25■□□□□ 0.35
FGFR2-222ENST00000604236 HSPA1LP34931 641 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 RRAGAQ7L523 313 aa17.25■□□□□ 0.35
FGFR2-222ENST00000604236 ADAT2Q7Z6V5 191 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms