RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 OLFM4Q6UX06 510 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 PRPF38AQ8NAV1 312 aaKnown RBP3.51□□□□□ -1.85
VCAM1-205ENST00000603679 APPBP2Q92624 585 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 SPOCK3Q9BQ16 436 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 ARHGAP9Q9BRR9 750 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 CCDC113Q9H0I3 377 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 STIM2Q9P246 746 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 AGTPBP1Q9UPW5 1226 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 MTCL1Q9Y4B5 1905 aaKnown RBP3.51□□□□□ -1.85
VCAM1-205ENST00000603679 VGLL3A8MV65 326 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 CLGNO14967 610 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 GALR2O43603 387 aaPredicted RBP3.51□□□□□ -1.85
VCAM1-205ENST00000603679 ACTN4O43707 911 aaKnown RBP3.51□□□□□ -1.85
VCAM1-205ENST00000603679 SLC5A1P13866 664 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 RFC2P35250 354 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 EIF1AXP47813 144 aaKnown RBP3.51□□□□□ -1.85
VCAM1-205ENST00000603679 IRX3P78415 501 aaPredicted RBP3.51□□□□□ -1.85
VCAM1-205ENST00000603679 GHRHRQ02643 423 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 CBX2Q14781 532 aaPredicted RBP3.51□□□□□ -1.85
VCAM1-205ENST00000603679 TSHZ1Q6ZSZ6 1077 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 HOMER1Q86YM7 354 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 GJD3Q8N144 294 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 HERVK_113Q902F9 699 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 MPHOSPH6Q99547 160 aaKnown RBP3.51□□□□□ -1.85
VCAM1-205ENST00000603679 HDAC9Q9UKV0 1011 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 Q9Y3F1 56 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 PNMA6FA0A0J9YX94 578 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 ERC2O15083 957 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 NR1I2O75469 434 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 TRPA1O75762 1119 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 PFKMP08237 780 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 FCGRTP55899 365 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 TBX4P57082 545 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 RHBDL3P58872 404 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 AMPD3Q01432 767 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 MTMR3Q13615 1198 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 GRB14Q14449 540 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 MAMDC4Q6UXC1 1216 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 SESTD1Q86VW0 696 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 FMNL3Q8IVF7 1028 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 KLHDC9Q8NEP7 349 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 ADAM32Q8TC27 787 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 CD99L2Q8TCZ2 262 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 TRIM44Q96DX7 344 aaPredicted RBP3.51□□□□□ -1.85
VCAM1-205ENST00000603679 C11orf49Q9H6J7 331 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 CD209Q9NNX6 404 aa3.51□□□□□ -1.85
VCAM1-205ENST00000603679 ZNF70Q9UC06 446 aaPredicted RBP3.51□□□□□ -1.85
VCAM1-205ENST00000603679 BTBD19C9JJ37 291 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 GPR182O15218 404 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 CDC45O75419 566 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 CNMDO75829 334 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 ALDH1L1O75891 902 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 CTSHP09668 335 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 GRK4P32298 578 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 TERF1P54274 439 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 NAP1L1P55209 391 aaKnown RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 FOXD4Q12950 439 aaPredicted RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 BIRC2Q13490 618 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 DOK7Q18PE1 504 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 ZBTB33Q86T24 672 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 SYNPOQ8N3V7 929 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 U2AF1L4Q8WU68 220 aaKnown RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 VWCEQ96DN2 955 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 P2RX7Q99572 595 aaKnown RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 ZNF341Q9BYN7 854 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 DEFB129Q9H1M3 183 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 SEMA6BQ9H3T3 888 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 C11orf16Q9NQ32 467 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 EVA1BQ9NVM1 165 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 CDV3Q9UKY7 258 aaKnown RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 COG5Q9UP83 839 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 NUP210Q8TEM1 1887 aaPredicted RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 ASTN2O75129 1339 aaPredicted RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 CTNND1O60716 968 aaKnown RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 TBC1D8O95759 1140 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 CD4P01730 458 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 RPLP1P05386 114 aaKnown RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 MZF1P28698 734 aaPredicted RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 COPB2P35606 906 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 FAM160A1Q05DH4 1040 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 PTPN11Q06124 597 aaPredicted RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 NAA30Q147X3 362 aaPredicted RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 PROSER3Q2NL68 480 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 TSGA10IPQ3SY00 556 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 ZNF394Q53GI3 561 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 ERMP1Q7Z2K6 904 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 CDAN1Q8IWY9 1227 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 FAM43AQ8N2R8 423 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 STAG1Q8WVM7 1258 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 ASB2Q96Q27 587 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 SLC4A5Q9BY07 1137 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 TCEAL9Q9UHQ7 104 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 BAZ2AQ9UIF9 1905 aaKnown RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 RIMBP2O15034 1052 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 DHX16O60231 1041 aaKnown RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 PLA2G6O60733 806 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 BMP1P13497 986 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 CYBAP13498 195 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 MCCP23508 829 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 PAX3P23760 479 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms