RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 HSPA1LP34931 641 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 MMP16P51512 607 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 SKOR1P84550 965 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 CACNB2Q08289 660 aaPredicted RBP5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 PDCD2Q16342 344 aaPredicted RBP5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 SWI5Q1ZZU3 235 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 MAP7D1Q3KQU3 841 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 HSP90B2PQ58FF3 399 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 FAM102BQ5T8I3 360 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 SYT10Q6XYQ8 523 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 SPATC1Q76KD6 591 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 TPCN2Q8NHX9 752 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 KIF18AQ8NI77 898 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 IL21Q9HBE4 155 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 GIMAP2Q9UG22 337 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 HCN4Q9Y3Q4 1203 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 SPATA31A6Q5VVP1 1343 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 MYOM3Q5VTT5 1437 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 PMM2O15305 246 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 SLC5A1P13866 664 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 MAGEA9P43362 315 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 RWDD2BP57060 319 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 GRM3Q14832 879 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 RILPL1Q5EBL4 403 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 SHQ1Q6PI26 577 aaKnown RBP5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 SRLQ86TD4 932 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 TEX11Q8IYF3 940 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 CARNMT1Q8N4J0 409 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 NSUN6Q8TEA1 469 aaKnown RBP5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 PIBF1Q8WXW3 757 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 TRIM11Q96F44 468 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 FAXDC2Q96IV6 333 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 SH3GL3Q99963 347 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 LZTS2Q9BRK4 669 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 HERPUD2Q9BSE4 406 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 VEZTQ9HBM0 779 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 UTP6Q9NYH9 597 aaKnown RBP5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 SIRPGQ9P1W8 387 aa5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 RGS17Q9UGC6 210 aaPredicted RBP5.69□□□□□ -1.5
SPTBN1-206ENST00000602898 A0A0B4J203 849 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 ZBTB24O43167 697 aaPredicted RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 POLR2BP30876 1174 aaKnown RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 RXRGP48443 463 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 SCNN1DP51172 638 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 SH3BP2P78314 561 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 MMRN1Q13201 1228 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 PDE1CQ14123 709 aaPredicted RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 PLBD1Q6P4A8 553 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 FIP1L1Q6UN15 594 aaKnown RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 SPOCD1Q6ZMY3 1216 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 TBC1D1Q86TI0 1168 aaPredicted RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 SIX5Q8N196 739 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 TAB3Q8N5C8 712 aaPredicted RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 NFATC2IPQ8NCF5 419 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 COG1Q8WTW3 980 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 STRBPQ96SI9 672 aaKnown RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 SLC12A5Q9H2X9 1139 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 NOD1Q9Y239 953 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 USP19O94966 1318 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 UBR1Q8IWV7 1749 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 RGPD3A6NKT7 1758 aaPredicted RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 RGPD4Q7Z3J3 1758 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 A0A087X0B3 334 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 KLRG2A4D1S0 409 aaPredicted RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 STXBP3O00186 592 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 TRIM27P14373 513 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 CTCFP49711 727 aaPredicted RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 HSPA2P54652 639 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 G3BP1Q13283 466 aaKnown RBP eCLIP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 ARMC4Q5T2S8 1044 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 DESI1Q6ICB0 168 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 MZT2AQ6P582 158 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 KRT26Q7Z3Y9 468 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 DNAJB7Q7Z6W7 309 aaPredicted RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 FAM169BQ8N8A8 192 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 C1orf216Q8TAB5 229 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 CCDC26Q8TAB7 109 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 GSDMBQ8TAX9 411 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 CRBNQ96SW2 442 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 FAM167BQ9BTA0 163 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 SARGQ9BW04 601 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 RBCK1Q9BYM8 510 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 DBNDD1Q9H9R9 158 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 PDRG1Q9NUG6 133 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 ARHGAP31Q2M1Z3 1444 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 SFI1A8K8P3 1242 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 J3KRW8 73 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 FOXN3O00409 490 aaPredicted RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 ATF7P17544 494 aaPredicted RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 ZNF445P59923 1031 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 ICA1Q05084 483 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 MRPL28Q13084 256 aaKnown RBP5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 DCTN1Q14203 1278 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 TTC39AQ5SRH9 613 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 KLHL10Q6JEL2 608 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 IRGCQ6NXR0 463 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 LDHAL6AQ6ZMR3 332 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 SAPCD2Q86UD0 394 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms