RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 BRPF3Q9ULD4 1205 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 PTPN22Q9Y2R2 807 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 SLC15A5A6NIM6 579 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 ZBTB43O43298 467 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 PTPREP23469 700 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 IRF5Q13568 498 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 COL13A1Q5TAT6 717 aaPredicted RBP16.15■□□□□ 0.18
RNF40-212ENST00000602784 FBXO46Q6PJ61 603 aaPredicted RBP16.15■□□□□ 0.18
RNF40-212ENST00000602784 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.15■□□□□ 0.18
RNF40-212ENST00000602784 NCAPG2Q86XI2 1143 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 CHST13Q8NET6 341 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 SOCS4Q8WXH5 440 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 MTMR8Q96EF0 704 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 MYL10Q9BUA6 226 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 JMJD4Q9H9V9 463 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 PDRG1Q9NUG6 133 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 FBXO40Q9UH90 709 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 IVNS1ABPQ9Y6Y0 642 aa16.15■□□□□ 0.18
RNF40-212ENST00000602784 KLF18A0A0U1RQI7 1052 aa16.14■□□□□ 0.17
RNF40-212ENST00000602784 FLT3LGP49771 235 aa16.14■□□□□ 0.17
RNF40-212ENST00000602784 TOB2Q14106 344 aaPredicted RBP16.14■□□□□ 0.17
RNF40-212ENST00000602784 MORN1Q5T089 497 aa16.14■□□□□ 0.17
RNF40-212ENST00000602784 MICU3Q86XE3 530 aa16.14■□□□□ 0.17
RNF40-212ENST00000602784 IL27Q8NEV9 243 aa16.14■□□□□ 0.17
RNF40-212ENST00000602784 USP6NLQ92738 828 aa16.14■□□□□ 0.17
RNF40-212ENST00000602784 AGBL1Q96MI9 1066 aa16.14■□□□□ 0.17
RNF40-212ENST00000602784 NUDT12Q9BQG2 462 aa16.14■□□□□ 0.17
RNF40-212ENST00000602784 CPVLQ9H3G5 476 aa16.14■□□□□ 0.17
RNF40-212ENST00000602784 CWC22Q9HCG8 908 aaKnown RBP16.14■□□□□ 0.17
RNF40-212ENST00000602784 RBM28Q9NW13 759 aaKnown RBP16.14■□□□□ 0.17
RNF40-212ENST00000602784 RIPK3Q9Y572 518 aa16.14■□□□□ 0.17
RNF40-212ENST00000602784 ZSWIM8A7E2V4 1837 aa16.14■□□□□ 0.17
RNF40-212ENST00000602784 DOCK3Q8IZD9 2030 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 CCDC196A0A1B0GTZ2 297 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 FCER1AP12319 257 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 XRCC5P13010 732 aaKnown RBP16.13■□□□□ 0.17
RNF40-212ENST00000602784 SNAP25P60880 206 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 PRKCZQ05513 592 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 APOBRQ0VD83 1088 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 GRB14Q14449 540 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 ANKRD1Q15327 319 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 WDR78Q5VTH9 848 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 CCDC174Q6PII3 467 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 ZNF274Q96GC6 653 aaPredicted RBP16.13■□□□□ 0.17
RNF40-212ENST00000602784 CCPG1Q9ULG6 757 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 GABRQQ9UN88 632 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 NID2Q14112 1375 aa16.13■□□□□ 0.17
RNF40-212ENST00000602784 ZBTB5O15062 677 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 CYTH3O43739 400 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
RNF40-212ENST00000602784 ECM2O94769 699 aaPredicted RBP16.12■□□□□ 0.17
RNF40-212ENST00000602784 HOXC6P09630 235 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 RXRAP19793 462 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 TRAF1Q13077 416 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 CDC37Q16543 378 aaPredicted RBP16.12■□□□□ 0.17
RNF40-212ENST00000602784 RTN1Q16799 776 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 SLC35G1Q2M3R5 365 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 TMTC3Q6ZXV5 915 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 NBPF11Q86T75 865 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 KIF2CQ99661 725 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 MCOLN1Q9GZU1 580 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 MAF1Q9H063 256 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 VAT1LQ9HCJ6 419 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 HPS5Q9UPZ3 1129 aa16.12■□□□□ 0.17
RNF40-212ENST00000602784 GOLGA8AA7E2F4 631 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 GOLGA8BA8MQT2 603 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 PDIA3P30101 505 aaKnown RBP16.11■□□□□ 0.17
RNF40-212ENST00000602784 RGS2P41220 211 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 NEK4P51957 841 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 MAP2K5Q13163 448 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 KCTD2Q14681 263 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 QRICH1Q2TAL8 776 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 TRMT44Q8IYL2 757 aaKnown RBP16.11■□□□□ 0.17
RNF40-212ENST00000602784 SRBD1Q8N5C6 995 aaKnown RBP16.11■□□□□ 0.17
RNF40-212ENST00000602784 RAET1EQ8TD07 263 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 PXYLP1Q8TE99 480 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 TRERF1Q96PN7 1200 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 ACAD9Q9H845 621 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 RNF146Q9NTX7 359 aa16.11■□□□□ 0.17
RNF40-212ENST00000602784 FAM217BQ9NTX9 383 aaPredicted RBP16.11■□□□□ 0.17
RNF40-212ENST00000602784 ZNF236Q9UL36 1845 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 PNMA6FA0A0J9YX94 578 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 PLEKHA8P1O95397 391 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 ALAS1P13196 640 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 ADORA2AP29274 412 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 METAP2P50579 478 aaKnown RBP eCLIP16.1■□□□□ 0.17
RNF40-212ENST00000602784 FUT2Q10981 343 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 FBXO11Q86XK2 927 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 CCDC144CPQ8IYA2 1237 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 RRP36Q96EU6 259 aaKnown RBP16.1■□□□□ 0.17
RNF40-212ENST00000602784 TBC1D32Q96NH3 1257 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 MMP19Q99542 508 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 AMNQ9BXJ7 453 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 SLC5A4Q9NY91 659 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 PTCH2Q9Y6C5 1203 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 PLXNB2O15031 1838 aa16.1■□□□□ 0.17
RNF40-212ENST00000602784 DNAJC25-GNG10A0A024R161 153 aa16.09■□□□□ 0.17
RNF40-212ENST00000602784 ADCY3O60266 1144 aa16.09■□□□□ 0.17
RNF40-212ENST00000602784 SLC4A3P48751 1232 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms