RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 MTMR10Q9NXD2 777 aa25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 TACC3Q9Y6A5 838 aa25.11■■□□□ 1.61
PPFIA3-209ENST00000602783 A0A0D9SFI3 127 aa25.1■■□□□ 1.61
PPFIA3-209ENST00000602783 A0A1W2PQ45 241 aaPredicted RBP25.1■■□□□ 1.61
PPFIA3-209ENST00000602783 A0A1W2PQY0 241 aa25.1■■□□□ 1.61
PPFIA3-209ENST00000602783 RANBP6O60518 1105 aaKnown RBP25.1■■□□□ 1.61
PPFIA3-209ENST00000602783 ACVR2BQ13705 512 aa25.1■■□□□ 1.61
PPFIA3-209ENST00000602783 FAM227BQ96M60 508 aa25.1■■□□□ 1.61
PPFIA3-209ENST00000602783 TSEN34Q9BSV6 310 aaKnown RBP25.1■■□□□ 1.61
PPFIA3-209ENST00000602783 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.1■■□□□ 1.61
PPFIA3-209ENST00000602783 ANAPC4Q9UJX5 808 aa25.1■■□□□ 1.61
PPFIA3-209ENST00000602783 SUPT16HQ9Y5B9 1047 aaKnown RBP25.1■■□□□ 1.61
PPFIA3-209ENST00000602783 SYNRGQ9UMZ2 1314 aa25.1■■□□□ 1.61
PPFIA3-209ENST00000602783 TRIM6-TRIM34B2RNG4 842 aa25.09■■□□□ 1.61
PPFIA3-209ENST00000602783 NUCB1Q02818 461 aa25.09■■□□□ 1.61
PPFIA3-209ENST00000602783 SHHQ15465 462 aa25.09■■□□□ 1.61
PPFIA3-209ENST00000602783 RCSD1Q6JBY9 416 aa25.09■■□□□ 1.61
PPFIA3-209ENST00000602783 KCTD1Q719H9 257 aa25.09■■□□□ 1.61
PPFIA3-209ENST00000602783 FGD4Q96M96 766 aa25.09■■□□□ 1.61
PPFIA3-209ENST00000602783 AGBL1Q96MI9 1066 aa25.09■■□□□ 1.61
PPFIA3-209ENST00000602783 ABHD16BQ9H3Z7 469 aa25.09■■□□□ 1.61
PPFIA3-209ENST00000602783 ACAD9Q9H845 621 aa25.09■■□□□ 1.61
PPFIA3-209ENST00000602783 DUSP11O75319 330 aaKnown RBP25.08■■□□□ 1.61
PPFIA3-209ENST00000602783 ACLYP53396 1101 aa25.08■■□□□ 1.61
PPFIA3-209ENST00000602783 ALX1Q15699 326 aa25.08■■□□□ 1.61
PPFIA3-209ENST00000602783 ARMCX2Q7L311 632 aa25.08■■□□□ 1.61
PPFIA3-209ENST00000602783 MTMR7Q9Y216 660 aa25.08■■□□□ 1.61
PPFIA3-209ENST00000602783 ZNF536O15090 1300 aa25.08■■□□□ 1.6
PPFIA3-209ENST00000602783 LTBP2Q14767 1821 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 PLA2G6O60733 806 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 PQBP1O60828 265 aaKnown RBP25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 CLTBP09497 229 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 CNTN2Q02246 1040 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 NMIQ13287 307 aaPredicted RBP25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 KCNA10Q16322 511 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 C9orf50Q5SZB4 431 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 KLHDC9Q8NEP7 349 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 NUP133Q8WUM0 1156 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 RILPL2Q969X0 211 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 STARD7Q9NQZ5 370 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 TOMM22Q9NS69 142 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 RNF146Q9NTX7 359 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 LAMA4Q16363 1823 aa25.07■■□□□ 1.6
PPFIA3-209ENST00000602783 POTEB2H3BUK9 544 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 ORC4O43929 436 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 FGAP02671 866 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 SNAP25P60880 206 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 CCDC144BQ3MJ40 725 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 MCMDC2Q4G0Z9 681 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 CCDC174Q6PII3 467 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 TICAM2Q86XR7 235 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 PLEKHM2Q8IWE5 1019 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 CCDC144CPQ8IYA2 1237 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 TRERF1Q96PN7 1200 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 A1CFQ9NQ94 594 aaKnown RBP25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 STXBP5LQ9Y2K9 1186 aa25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 LAMA2P24043 3122 aaKnown RBP25.06■■□□□ 1.6
PPFIA3-209ENST00000602783 MYADML2A6NDP7 307 aa25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 MOXD2PA6NHM9 499 aa25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 C6orf222P0C671 652 aaPredicted RBP25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 ALAS1P13196 640 aa25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 ITGB8P26012 769 aa25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 IRX5P78411 483 aaPredicted RBP25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 TKFCQ3LXA3 575 aa25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 CCSAPQ6IQ19 270 aaPredicted RBP25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 RASGRP2Q7LDG7 609 aa25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 ZNF589Q86UQ0 364 aaPredicted RBP25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 PRR12Q9ULL5 1215 aa25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 MCM3APO60318 1980 aa25.05■■□□□ 1.6
PPFIA3-209ENST00000602783 ADCY6O43306 1168 aa25.04■■□□□ 1.6
PPFIA3-209ENST00000602783 FGRP09769 529 aa25.04■■□□□ 1.6
PPFIA3-209ENST00000602783 RRP12Q5JTH9 1297 aaKnown RBP25.04■■□□□ 1.6
PPFIA3-209ENST00000602783 FAM109BQ6ICB4 259 aaPredicted RBP25.04■■□□□ 1.6
PPFIA3-209ENST00000602783 FAM133AQ8N9E0 248 aa25.04■■□□□ 1.6
PPFIA3-209ENST00000602783 OSBPL3Q9H4L5 887 aa25.04■■□□□ 1.6
PPFIA3-209ENST00000602783 SPC25Q9HBM1 224 aa25.04■■□□□ 1.6
PPFIA3-209ENST00000602783 TMEM39AQ9NV64 488 aa25.04■■□□□ 1.6
PPFIA3-209ENST00000602783 RAG1P15918 1043 aa25.03■■□□□ 1.6
PPFIA3-209ENST00000602783 NOVP48745 357 aa25.03■■□□□ 1.6
PPFIA3-209ENST00000602783 CCDC96Q2M329 555 aa25.03■■□□□ 1.6
PPFIA3-209ENST00000602783 CCDC171Q6TFL3 1326 aa25.03■■□□□ 1.6
PPFIA3-209ENST00000602783 SOWAHBA6NEL2 793 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 DCDC2CA8MYV0 355 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 KIAA0355O15063 1070 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 HSPD1P10809 573 aaKnown RBP25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 CST5P28325 142 aaPredicted RBP25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 GJA9P57773 515 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 FAAP100Q0VG06 881 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 ANKRD33Q7Z3H0 272 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 PCSK9Q8NBP7 692 aaKnown RBP25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 DCAF4Q8WV16 495 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 VTI1AQ96AJ9 217 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 GLT1D1Q96MS3 346 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 FAM161BQ96MY7 647 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 TOX2Q96NM4 488 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 KATNBL1Q9H079 304 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 ZMYM6O95789 1325 aa25.02■■□□□ 1.6
PPFIA3-209ENST00000602783 ASB14A6NK59 587 aa25.01■■□□□ 1.59
PPFIA3-209ENST00000602783 ASGR1P07306 291 aa25.01■■□□□ 1.59
PPFIA3-209ENST00000602783 MUM1L1Q5H9M0 696 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms