RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 CHST13Q8NET6 341 aa18.78■□□□□ 0.6
SFXN2-208ENST00000602660 RANBP17Q9H2T7 1088 aaKnown RBP18.78■□□□□ 0.6
SFXN2-208ENST00000602660 DDX20Q9UHI6 824 aaKnown RBP18.78■□□□□ 0.6
SFXN2-208ENST00000602660 FRMPD2Q68DX3 1309 aaPredicted RBP18.77■□□□□ 0.6
SFXN2-208ENST00000602660 NEFLP07196 543 aa18.77■□□□□ 0.6
SFXN2-208ENST00000602660 COL6A1P12109 1028 aa18.77■□□□□ 0.6
SFXN2-208ENST00000602660 SLC4A3P48751 1232 aa18.77■□□□□ 0.6
SFXN2-208ENST00000602660 ZNF543Q08ER8 600 aa18.77■□□□□ 0.6
SFXN2-208ENST00000602660 IKQ13123 557 aaPredicted RBP18.77■□□□□ 0.6
SFXN2-208ENST00000602660 NECAB2Q7Z6G3 386 aa18.77■□□□□ 0.6
SFXN2-208ENST00000602660 TINF2Q9BSI4 451 aa18.77■□□□□ 0.6
SFXN2-208ENST00000602660 CTDP1Q9Y5B0 961 aaPredicted RBP18.77■□□□□ 0.6
SFXN2-208ENST00000602660 LTBP2Q14767 1821 aa18.77■□□□□ 0.59
SFXN2-208ENST00000602660 SEC23AQ15436 765 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 SYDE2Q5VT97 1194 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 CCDC174Q6PII3 467 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 STOX1Q6ZVD7 989 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 CYB5R4Q7L1T6 521 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 IQCA1Q86XH1 822 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 MAP4K1Q92918 833 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 ZSCAN10Q96SZ4 725 aaPredicted RBP18.76■□□□□ 0.59
SFXN2-208ENST00000602660 HTATIP2Q9BUP3 242 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 KRT23Q9C075 422 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 GPCPD1Q9NPB8 672 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 HOMER2Q9NSB8 354 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 FBXO40Q9UH90 709 aa18.76■□□□□ 0.59
SFXN2-208ENST00000602660 TNKSO95271 1327 aa18.75■□□□□ 0.59
SFXN2-208ENST00000602660 H0YGN5 161 aa18.75■□□□□ 0.59
SFXN2-208ENST00000602660 SEPT4O43236 478 aa18.75■□□□□ 0.59
SFXN2-208ENST00000602660 CNGA1P29973 690 aa18.75■□□□□ 0.59
SFXN2-208ENST00000602660 BMP2KLQ5H9B9 411 aa18.75■□□□□ 0.59
SFXN2-208ENST00000602660 MUM1L1Q5H9M0 696 aa18.75■□□□□ 0.59
SFXN2-208ENST00000602660 MAMDC4Q6UXC1 1216 aa18.75■□□□□ 0.59
SFXN2-208ENST00000602660 PNMA1Q8ND90 353 aa18.75■□□□□ 0.59
SFXN2-208ENST00000602660 ACAD9Q9H845 621 aa18.75■□□□□ 0.59
SFXN2-208ENST00000602660 CNNM2Q9H8M5 875 aa18.75■□□□□ 0.59
SFXN2-208ENST00000602660 A1CFQ9NQ94 594 aaKnown RBP18.75■□□□□ 0.59
SFXN2-208ENST00000602660 RNF146Q9NTX7 359 aa18.75■□□□□ 0.59
SFXN2-208ENST00000602660 U3KPZ7 1027 aaPredicted RBP18.75■□□□□ 0.59
SFXN2-208ENST00000602660 MSCO60682 206 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 SNAI1O95863 264 aaPredicted RBP18.74■□□□□ 0.59
SFXN2-208ENST00000602660 ZNF865P0CJ78 1059 aaPredicted RBP18.74■□□□□ 0.59
SFXN2-208ENST00000602660 TKFCQ3LXA3 575 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 CCDC178Q5BJE1 867 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 ANO1Q5XXA6 986 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 ZNF467Q7Z7K2 595 aaPredicted RBP18.74■□□□□ 0.59
SFXN2-208ENST00000602660 FAM133AQ8N9E0 248 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 DPF3Q92784 378 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 DDX11Q96FC9 970 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 TRERF1Q96PN7 1200 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 ESYT1Q9BSJ8 1104 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 LSG1Q9H089 658 aaKnown RBP18.74■□□□□ 0.59
SFXN2-208ENST00000602660 CPVLQ9H3G5 476 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 NRBP1Q9UHY1 535 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 ASTN1O14525 1302 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 SYNGAP1Q96PV0 1343 aa18.74■□□□□ 0.59
SFXN2-208ENST00000602660 ICAM1P05362 532 aa18.73■□□□□ 0.59
SFXN2-208ENST00000602660 GOLGA8HP0CJ92 632 aa18.73■□□□□ 0.59
SFXN2-208ENST00000602660 ALAS1P13196 640 aa18.73■□□□□ 0.59
SFXN2-208ENST00000602660 CNTN2Q02246 1040 aa18.73■□□□□ 0.59
SFXN2-208ENST00000602660 ANKRD35Q8N283 1001 aa18.73■□□□□ 0.59
SFXN2-208ENST00000602660 MSL3Q8N5Y2 521 aaKnown RBP18.73■□□□□ 0.59
SFXN2-208ENST00000602660 C11orf49Q9H6J7 331 aa18.73■□□□□ 0.59
SFXN2-208ENST00000602660 CCPG1Q9ULG6 757 aa18.73■□□□□ 0.59
SFXN2-208ENST00000602660 RBM8AQ9Y5S9 174 aaKnown RBP18.73■□□□□ 0.59
SFXN2-208ENST00000602660 E7EWF7 191 aa18.72■□□□□ 0.59
SFXN2-208ENST00000602660 SOWAHBA6NEL2 793 aa18.71■□□□□ 0.59
SFXN2-208ENST00000602660 COL9A3Q14050 684 aaPredicted RBP18.71■□□□□ 0.59
SFXN2-208ENST00000602660 GPATCH4Q5T3I0 446 aaKnown RBP18.71■□□□□ 0.59
SFXN2-208ENST00000602660 KATNBL1Q9H079 304 aa18.71■□□□□ 0.59
SFXN2-208ENST00000602660 KAT14Q9H8E8 782 aa18.71■□□□□ 0.59
SFXN2-208ENST00000602660 SENP2Q9HC62 589 aa18.71■□□□□ 0.59
SFXN2-208ENST00000602660 ANTXR2P58335 489 aa18.7■□□□□ 0.58
SFXN2-208ENST00000602660 MB21D2Q8IYB1 491 aaPredicted RBP18.7■□□□□ 0.58
SFXN2-208ENST00000602660 CLEC4DQ8WXI8 215 aa18.7■□□□□ 0.58
SFXN2-208ENST00000602660 LENG1Q96BZ8 264 aaPredicted RBP18.7■□□□□ 0.58
SFXN2-208ENST00000602660 CCDC136Q96JN2 1154 aa18.7■□□□□ 0.58
SFXN2-208ENST00000602660 UBAC1Q9BSL1 405 aa18.7■□□□□ 0.58
SFXN2-208ENST00000602660 UBA5Q9GZZ9 404 aa18.7■□□□□ 0.58
SFXN2-208ENST00000602660 CYP39A1Q9NYL5 469 aa18.7■□□□□ 0.58
SFXN2-208ENST00000602660 WDR19Q8NEZ3 1342 aa18.7■□□□□ 0.58
SFXN2-208ENST00000602660 DOCK5Q9H7D0 1870 aa18.69■□□□□ 0.58
SFXN2-208ENST00000602660 POTEB2H3BUK9 544 aa18.69■□□□□ 0.58
SFXN2-208ENST00000602660 DNM1LO00429 736 aa18.69■□□□□ 0.58
SFXN2-208ENST00000602660 NFIBO00712 420 aa18.69■□□□□ 0.58
SFXN2-208ENST00000602660 ADCY6O43306 1168 aa18.69■□□□□ 0.58
SFXN2-208ENST00000602660 EVI5O60447 810 aa18.69■□□□□ 0.58
SFXN2-208ENST00000602660 GJC2Q5T442 439 aaPredicted RBP18.69■□□□□ 0.58
SFXN2-208ENST00000602660 ARMCX2Q7L311 632 aa18.69■□□□□ 0.58
SFXN2-208ENST00000602660 PURBQ96QR8 312 aaKnown RBP18.69■□□□□ 0.58
SFXN2-208ENST00000602660 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.69■□□□□ 0.58
SFXN2-208ENST00000602660 DDX49Q9Y6V7 483 aaKnown RBP18.69■□□□□ 0.58
SFXN2-208ENST00000602660 LAMA3Q16787 3333 aa18.69■□□□□ 0.58
SFXN2-208ENST00000602660 TRDNQ13061 729 aa18.68■□□□□ 0.58
SFXN2-208ENST00000602660 NECTIN1Q15223 517 aa18.68■□□□□ 0.58
SFXN2-208ENST00000602660 LRRC41Q15345 812 aa18.68■□□□□ 0.58
SFXN2-208ENST00000602660 LRRC26Q2I0M4 334 aa18.68■□□□□ 0.58
SFXN2-208ENST00000602660 ASPRV1Q53RT3 343 aa18.68■□□□□ 0.58
SFXN2-208ENST00000602660 IFIT1BQ5T764 474 aaKnown RBP18.68■□□□□ 0.58
SFXN2-208ENST00000602660 CHST3Q7LGC8 479 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms