RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 RNF146Q9NTX7 359 aa30.68■■■□□ 2.5
PNKP-216ENST00000601816 SYNGAP1Q96PV0 1343 aa30.68■■■□□ 2.5
PNKP-216ENST00000601816 KBTBD13C9JR72 458 aa30.67■■■□□ 2.5
PNKP-216ENST00000601816 MYCNP04198 464 aaPredicted RBP30.67■■■□□ 2.5
PNKP-216ENST00000601816 TAL1P17542 331 aaPredicted RBP30.67■■■□□ 2.5
PNKP-216ENST00000601816 NT5C2P49902 561 aa30.67■■■□□ 2.5
PNKP-216ENST00000601816 TKFCQ3LXA3 575 aa30.67■■■□□ 2.5
PNKP-216ENST00000601816 CCDC174Q6PII3 467 aa30.67■■■□□ 2.5
PNKP-216ENST00000601816 CTNNA3Q9UI47 895 aa30.67■■■□□ 2.5
PNKP-216ENST00000601816 RARBP10826 455 aa30.66■■■□□ 2.5
PNKP-216ENST00000601816 SNAP25P60880 206 aa30.66■■■□□ 2.5
PNKP-216ENST00000601816 IMMTQ16891 758 aaKnown RBP30.66■■■□□ 2.5
PNKP-216ENST00000601816 MAMDC4Q6UXC1 1216 aa30.66■■■□□ 2.5
PNKP-216ENST00000601816 ZNF865P0CJ78 1059 aaPredicted RBP30.65■■■□□ 2.5
PNKP-216ENST00000601816 ALAS1P13196 640 aa30.65■■■□□ 2.5
PNKP-216ENST00000601816 AKR1A1P14550 325 aa30.65■■■□□ 2.5
PNKP-216ENST00000601816 FXR1P51114 621 aaKnown RBP eCLIP30.65■■■□□ 2.5
PNKP-216ENST00000601816 TTBK2Q6IQ55 1244 aa30.65■■■□□ 2.5
PNKP-216ENST00000601816 XPNPEP3Q9NQH7 507 aa30.65■■■□□ 2.5
PNKP-216ENST00000601816 FRMPD2Q68DX3 1309 aaPredicted RBP30.65■■■□□ 2.5
PNKP-216ENST00000601816 SYN1P17600 705 aa30.64■■■□□ 2.5
PNKP-216ENST00000601816 BTNL9Q6UXG8 535 aa30.64■■■□□ 2.5
PNKP-216ENST00000601816 TRERF1Q96PN7 1200 aa30.64■■■□□ 2.5
PNKP-216ENST00000601816 GPCPD1Q9NPB8 672 aa30.64■■■□□ 2.5
PNKP-216ENST00000601816 SNAI1O95863 264 aaPredicted RBP30.63■■■□□ 2.49
PNKP-216ENST00000601816 PDHBP11177 359 aa30.63■■■□□ 2.49
PNKP-216ENST00000601816 SLC16A2P36021 539 aa30.63■■■□□ 2.49
PNKP-216ENST00000601816 ATN1P54259 1190 aaPredicted RBP30.63■■■□□ 2.49
PNKP-216ENST00000601816 LRRC41Q15345 812 aa30.63■■■□□ 2.49
PNKP-216ENST00000601816 SYDE2Q5VT97 1194 aa30.63■■■□□ 2.49
PNKP-216ENST00000601816 IQCA1Q86XH1 822 aa30.63■■■□□ 2.49
PNKP-216ENST00000601816 ZKSCAN3Q9BRR0 538 aa30.63■■■□□ 2.49
PNKP-216ENST00000601816 IL25Q9H293 177 aa30.63■■■□□ 2.49
PNKP-216ENST00000601816 A1CFQ9NQ94 594 aaKnown RBP30.63■■■□□ 2.49
PNKP-216ENST00000601816 CCPG1Q9ULG6 757 aa30.63■■■□□ 2.49
PNKP-216ENST00000601816 RAD50Q92878 1312 aa30.63■■■□□ 2.49
PNKP-216ENST00000601816 POTEB2H3BUK9 544 aa30.62■■■□□ 2.49
PNKP-216ENST00000601816 KDM4AO75164 1064 aa30.62■■■□□ 2.49
PNKP-216ENST00000601816 CCDC178Q5BJE1 867 aa30.62■■■□□ 2.49
PNKP-216ENST00000601816 RUFY2Q8WXA3 655 aa30.62■■■□□ 2.49
PNKP-216ENST00000601816 FGD4Q96M96 766 aa30.62■■■□□ 2.49
PNKP-216ENST00000601816 RANBP17Q9H2T7 1088 aaKnown RBP30.62■■■□□ 2.49
PNKP-216ENST00000601816 ZHX1Q9UKY1 873 aaPredicted RBP30.62■■■□□ 2.49
PNKP-216ENST00000601816 TRIOBPQ9H2D6 2365 aa30.62■■■□□ 2.49
PNKP-216ENST00000601816 B4E1Z4 1266 aa30.61■■■□□ 2.49
PNKP-216ENST00000601816 ICAM1P05362 532 aa30.61■■■□□ 2.49
PNKP-216ENST00000601816 DGKHQ86XP1 1220 aa30.61■■■□□ 2.49
PNKP-216ENST00000601816 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.61■■■□□ 2.49
PNKP-216ENST00000601816 ZNF543Q08ER8 600 aa30.6■■■□□ 2.49
PNKP-216ENST00000601816 RNF180Q86T96 592 aa30.6■■■□□ 2.49
PNKP-216ENST00000601816 FAM133AQ8N9E0 248 aa30.6■■■□□ 2.49
PNKP-216ENST00000601816 GDF15Q99988 308 aa30.6■■■□□ 2.49
PNKP-216ENST00000601816 FAM184BQ9ULE4 1060 aa30.6■■■□□ 2.49
PNKP-216ENST00000601816 A0A1W2PPC1 479 aa30.59■■■□□ 2.49
PNKP-216ENST00000601816 PGK1P00558 417 aa30.59■■■□□ 2.49
PNKP-216ENST00000601816 SNHG28P0DPA3 235 aa30.59■■■□□ 2.49
PNKP-216ENST00000601816 CNTN2Q02246 1040 aa30.59■■■□□ 2.49
PNKP-216ENST00000601816 MUM1L1Q5H9M0 696 aa30.59■■■□□ 2.49
PNKP-216ENST00000601816 LENG1Q96BZ8 264 aaPredicted RBP30.59■■■□□ 2.49
PNKP-216ENST00000601816 KRT23Q9C075 422 aa30.59■■■□□ 2.49
PNKP-216ENST00000601816 CHMLP26374 656 aa30.58■■■□□ 2.49
PNKP-216ENST00000601816 ADCYAP1R1P41586 468 aa30.58■■■□□ 2.49
PNKP-216ENST00000601816 RTP1P59025 263 aa30.58■■■□□ 2.49
PNKP-216ENST00000601816 ACVR2BQ13705 512 aa30.58■■■□□ 2.49
PNKP-216ENST00000601816 ARMCX2Q7L311 632 aa30.58■■■□□ 2.49
PNKP-216ENST00000601816 ABHD16BQ9H3Z7 469 aa30.58■■■□□ 2.49
PNKP-216ENST00000601816 CNNM2Q9H8M5 875 aa30.58■■■□□ 2.49
PNKP-216ENST00000601816 SMCHD1A6NHR9 2005 aa30.57■■■□□ 2.49
PNKP-216ENST00000601816 ZSCAN10Q96SZ4 725 aaPredicted RBP30.57■■■□□ 2.48
PNKP-216ENST00000601816 KAT14Q9H8E8 782 aa30.57■■■□□ 2.48
PNKP-216ENST00000601816 BMP8BP34820 402 aa30.56■■■□□ 2.48
PNKP-216ENST00000601816 MAGEA10P43363 369 aaPredicted RBP30.56■■■□□ 2.48
PNKP-216ENST00000601816 GPATCH4Q5T3I0 446 aaKnown RBP30.56■■■□□ 2.48
PNKP-216ENST00000601816 SLC39A5Q6ZMH5 540 aa30.56■■■□□ 2.48
PNKP-216ENST00000601816 CCDC144CPQ8IYA2 1237 aa30.56■■■□□ 2.48
PNKP-216ENST00000601816 PNMA1Q8ND90 353 aa30.56■■■□□ 2.48
PNKP-216ENST00000601816 FERMT2Q96AC1 680 aa30.56■■■□□ 2.48
PNKP-216ENST00000601816 CYP39A1Q9NYL5 469 aa30.56■■■□□ 2.48
PNKP-216ENST00000601816 ZSWIM5Q9P217 1185 aa30.56■■■□□ 2.48
PNKP-216ENST00000601816 PHF24Q9UPV7 400 aa30.56■■■□□ 2.48
PNKP-216ENST00000601816 SOWAHBA6NEL2 793 aa30.55■■■□□ 2.48
PNKP-216ENST00000601816 NSMFQ6X4W1 530 aa30.55■■■□□ 2.48
PNKP-216ENST00000601816 ANKS1AQ92625 1134 aa30.55■■■□□ 2.48
PNKP-216ENST00000601816 PNMA2Q9UL42 364 aa30.55■■■□□ 2.48
PNKP-216ENST00000601816 ATP11BQ9Y2G3 1177 aa30.55■■■□□ 2.48
PNKP-216ENST00000601816 SYNRGQ9UMZ2 1314 aa30.54■■■□□ 2.48
PNKP-216ENST00000601816 RANBP2P49792 3224 aaKnown RBP30.54■■■□□ 2.48
PNKP-216ENST00000601816 ASB14A6NK59 587 aa30.54■■■□□ 2.48
PNKP-216ENST00000601816 ADAMTS4O75173 837 aa30.54■■■□□ 2.48
PNKP-216ENST00000601816 ENAHQ8N8S7 591 aaPredicted RBP30.54■■■□□ 2.48
PNKP-216ENST00000601816 UBAC1Q9BSL1 405 aa30.54■■■□□ 2.48
PNKP-216ENST00000601816 TNKSO95271 1327 aa30.53■■■□□ 2.48
PNKP-216ENST00000601816 DUSP11O75319 330 aaKnown RBP30.53■■■□□ 2.48
PNKP-216ENST00000601816 CCDC144BQ3MJ40 725 aa30.53■■■□□ 2.48
PNKP-216ENST00000601816 GOLGA8HP0CJ92 632 aa30.52■■■□□ 2.48
PNKP-216ENST00000601816 SNX17Q15036 470 aa30.52■■■□□ 2.48
PNKP-216ENST00000601816 KATNBL1Q9H079 304 aa30.52■■■□□ 2.48
PNKP-216ENST00000601816 MCM3APO60318 1980 aa30.52■■■□□ 2.48
PNKP-216ENST00000601816 PTH1RQ03431 593 aa30.51■■■□□ 2.47
PNKP-216ENST00000601816 TRIM60Q495X7 471 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms