RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 GIPRP48546 466 aa6.49□□□□□ -1.37
VRK3-222ENST00000601324 LSRQ86X29 649 aaPredicted RBP6.49□□□□□ -1.37
VRK3-222ENST00000601324 MFSD2AQ8NA29 543 aa6.49□□□□□ -1.37
VRK3-222ENST00000601324 DPH2Q9BQC3 489 aaPredicted RBP6.49□□□□□ -1.37
VRK3-222ENST00000601324 ANTXR1Q9H6X2 564 aa6.49□□□□□ -1.37
VRK3-222ENST00000601324 KIF1AQ12756 1690 aa6.49□□□□□ -1.37
VRK3-222ENST00000601324 FMN2Q9NZ56 1722 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 ROCK1Q13464 1354 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 ABCC11Q96J66 1382 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 UPK3BL1B0FP48 263 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 CHURC1-FNTBB4DL54 471 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 UPK3BL2E5RIL1 263 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 CDK5R2Q13319 367 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 RSPO4Q2I0M5 234 aaPredicted RBP6.48□□□□□ -1.37
VRK3-222ENST00000601324 ARSHQ5FYA8 562 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 NKAPLQ5M9Q1 402 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 CDCP2Q5VXM1 449 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 NLRC3Q7RTR2 1065 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 WAPLQ7Z5K2 1190 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 ATG4CQ96DT6 458 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 CNNM2Q9H8M5 875 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 BTG4Q9NY30 223 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 SPATA31A1Q5TZJ5 1347 aa6.48□□□□□ -1.37
VRK3-222ENST00000601324 ARHGEF10O15013 1369 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 NUP155O75694 1391 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 COL14A1Q05707 1796 aaKnown RBP6.47□□□□□ -1.37
VRK3-222ENST00000601324 MYOM1P52179 1685 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 RNF43Q68DV7 783 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 ZAR1Q86SH2 424 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 TAB3Q8N5C8 712 aaPredicted RBP6.47□□□□□ -1.37
VRK3-222ENST00000601324 GIMAP7Q8NHV1 300 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 CYB5D2Q8WUJ1 264 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 GATA6Q92908 595 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 ARMC5Q96C12 935 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 ANAPC16Q96DE5 110 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 DRC1Q96MC2 740 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 TM9SF2Q99805 663 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 SYT17Q9BSW7 474 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 PRDM10Q9NQV6 1147 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 CRYBG1Q9Y4K1 1723 aa6.47□□□□□ -1.37
VRK3-222ENST00000601324 MAP3K5Q99683 1374 aa6.46□□□□□ -1.37
VRK3-222ENST00000601324 TNFRSF10CO14798 259 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 GSC2O15499 205 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 NME1P15531 152 aaKnown RBP6.46□□□□□ -1.38
VRK3-222ENST00000601324 RAG1P15918 1043 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 NFIAQ12857 509 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 NBPF8Q3BBV2 869 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 PHACTR4Q8IZ21 702 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 TOP6BLQ8N6T0 577 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 XAGE3Q8WTP9 111 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 MIPEPQ99797 713 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 DBNDD2Q9BQY9 259 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 DUSP23Q9BVJ7 150 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 SHANK3Q9BYB0 1731 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 ZNF408Q9H9D4 720 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 TRPM3Q9HCF6 1732 aaPredicted RBP6.46□□□□□ -1.38
VRK3-222ENST00000601324 PPP1R1BQ9UD71 204 aaPredicted RBP6.46□□□□□ -1.38
VRK3-222ENST00000601324 MRVI1Q9Y6F6 885 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 CHD4Q14839 1912 aa6.46□□□□□ -1.38
VRK3-222ENST00000601324 ALS2Q96Q42 1657 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 RGPD3A6NKT7 1758 aaPredicted RBP6.45□□□□□ -1.38
VRK3-222ENST00000601324 RGPD4Q7Z3J3 1758 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 RGS13O14921 159 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 PLSCR1O15162 318 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 DYRK3O43781 588 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 SLITRK5O94991 958 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 FSTP19883 344 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 GUCY2CP25092 1073 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 ADMP35318 185 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 ETFBP38117 255 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 INTS3Q68E01 1043 aaKnown RBP6.45□□□□□ -1.38
VRK3-222ENST00000601324 LETMD1Q6P1Q0 360 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 OGFOD3Q6PK18 319 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 FAM169BQ8N8A8 192 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 C19orf47Q8N9M1 422 aaKnown RBP6.45□□□□□ -1.38
VRK3-222ENST00000601324 CCDC74BQ96LY2 380 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 MFSD14AQ96MC6 490 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 RPGRIP1LQ68CZ1 1315 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 PEAK1Q9H792 1746 aa6.45□□□□□ -1.38
VRK3-222ENST00000601324 LEFTY1O75610 366 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 STK10O94804 968 aaKnown RBP6.44□□□□□ -1.38
VRK3-222ENST00000601324 IGLV1-40P01703 118 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 FAM87AP0C7U9 286 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 ACRP10323 421 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 CCNFP41002 786 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 CASP7P55210 303 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 TNNI3KQ59H18 835 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 RUFY4Q6ZNE9 571 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 SLC51AQ86UW1 340 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 DNAJB8Q8NHS0 232 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 PPP1R13LQ8WUF5 828 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 KIF2CQ99661 725 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 PRKAG3Q9UGI9 489 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 CEP131Q9UPN4 1083 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 KNDC1Q76NI1 1749 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 ADGRF5Q8IZF2 1346 aa6.44□□□□□ -1.38
VRK3-222ENST00000601324 SMAD7O15105 426 aaKnown RBP6.43□□□□□ -1.38
VRK3-222ENST00000601324 EOMESO95936 686 aa6.43□□□□□ -1.38
VRK3-222ENST00000601324 F13BP05160 661 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms