RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 ZNF654Q8IZM8 581 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 STK11IPQ8N1F8 1099 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 ENAHQ8N8S7 591 aaPredicted RBP13.34□□□□□ -0.27
ZNF548-211ENST00000600927 GPRC5AQ8NFJ5 357 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 NKX2-3Q8TAU0 364 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 CEP95Q96GE4 821 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
ZNF548-211ENST00000600927 LMBRD1Q9NUN5 540 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 ORC3Q9UBD5 711 aaPredicted RBP13.34□□□□□ -0.27
ZNF548-211ENST00000600927 NAP1L2Q9ULW6 460 aaPredicted RBP13.34□□□□□ -0.27
ZNF548-211ENST00000600927 GABRQQ9UN88 632 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 TNPO2O14787 897 aaKnown RBP13.33□□□□□ -0.28
ZNF548-211ENST00000600927 MBD3O95983 291 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 DSG3P32926 999 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 ADD1P35611 737 aaKnown RBP13.33□□□□□ -0.28
ZNF548-211ENST00000600927 TFAP4Q01664 338 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 SSRP1Q08945 709 aaKnown RBP13.33□□□□□ -0.28
ZNF548-211ENST00000600927 TROAPQ12815 778 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 RTN1Q16799 776 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 SLC9C1Q4G0N8 1177 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 MCTP1Q6DN14 999 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 FAM177A1Q8N128 213 aaPredicted RBP13.33□□□□□ -0.28
ZNF548-211ENST00000600927 FBXO18Q8NFZ0 1043 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 PORCNQ9H237 461 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 NCOA5Q9HCD5 579 aaKnown RBP13.33□□□□□ -0.28
ZNF548-211ENST00000600927 BTBD7Q9P203 1132 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 RBM27Q9P2N5 1060 aaKnown RBP13.33□□□□□ -0.28
ZNF548-211ENST00000600927 GJD2Q9UKL4 321 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 ADAMTS5Q9UNA0 930 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 ZNF236Q9UL36 1845 aa13.33□□□□□ -0.28
ZNF548-211ENST00000600927 VPS37CA5D8V6 355 aaPredicted RBP13.32□□□□□ -0.28
ZNF548-211ENST00000600927 ECM2O94769 699 aaPredicted RBP13.32□□□□□ -0.28
ZNF548-211ENST00000600927 TTLL1O95922 423 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 TSPY3P0CV98 308 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 TSPY8P0CW00 308 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 NCLP19338 710 aaKnown RBP13.32□□□□□ -0.28
ZNF548-211ENST00000600927 SMARCA1P28370 1054 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 KIF5BP33176 963 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 FLT3LGP49771 235 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 GNAQP50148 359 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 SOX10P56693 466 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 KRT85P78386 507 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 COG2Q14746 738 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 TRIM22Q8IYM9 498 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 SPICE1Q8N0Z3 855 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 GMCL1P1Q8NEA9 526 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 PXYLP1Q8TE99 480 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 SH3TC2Q8TF17 1288 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 USP6NLQ92738 828 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 COA7Q96BR5 231 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 RNF26Q9BY78 433 aaPredicted RBP13.32□□□□□ -0.28
ZNF548-211ENST00000600927 SCAND2PQ9GZW5 306 aaPredicted RBP13.32□□□□□ -0.28
ZNF548-211ENST00000600927 GOPCQ9HD26 462 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 IL17RBQ9NRM6 502 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 CFAP45Q9UL16 551 aa13.32□□□□□ -0.28
ZNF548-211ENST00000600927 TNRC18O15417 2968 aaPredicted RBP13.32□□□□□ -0.28
ZNF548-211ENST00000600927 MYH4Q9Y623 1939 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 MKI67P46013 3256 aaKnown RBP13.31□□□□□ -0.28
ZNF548-211ENST00000600927 DEXIO95424 95 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 NDUFB10O96000 172 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 CDC27P30260 824 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 MAPK4P31152 587 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 GRK4P32298 578 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 RCSD1Q6JBY9 416 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 BRAPQ7Z569 592 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 MICU3Q86XE3 530 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 MB21D1Q8N884 522 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 SLAIN1Q8ND83 568 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 RAET1EQ8TD07 263 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 DDX11Q96FC9 970 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 C8orf76Q96K31 380 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 LZTS2Q9BRK4 669 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 ZKSCAN3Q9BRR0 538 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 PAGR1Q9BTK6 254 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 TANGO6Q9C0B7 1094 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 SENP2Q9HC62 589 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 HOXC10Q9NYD6 342 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 ELP1O95163 1332 aa13.31□□□□□ -0.28
ZNF548-211ENST00000600927 F5H6K3 240 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 PRPF3O43395 683 aaKnown RBP13.3□□□□□ -0.28
ZNF548-211ENST00000600927 FLOT1O75955 427 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 ATP2B2Q01814 1243 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 KLRC3Q07444 240 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 RESTQ13127 1097 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 MORN1Q5T089 497 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 FAM83BQ5T0W9 1011 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 GPR142Q7Z601 462 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 NBPF11Q86T75 865 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 REPS2Q8NFH8 660 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 CTCFLQ8NI51 663 aaPredicted RBP13.3□□□□□ -0.28
ZNF548-211ENST00000600927 ATG4CQ96DT6 458 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 KAT14Q9H8E8 782 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 CLIP2Q9UDT6 1046 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 PPP1R9AQ9ULJ8 1098 aa13.3□□□□□ -0.28
ZNF548-211ENST00000600927 ISY1Q9ULR0 285 aaKnown RBP13.3□□□□□ -0.28
ZNF548-211ENST00000600927 DOCK3Q8IZD9 2030 aa13.29□□□□□ -0.28
ZNF548-211ENST00000600927 PRPF40AO75400 957 aaKnown RBP13.29□□□□□ -0.28
ZNF548-211ENST00000600927 XBP1P17861 261 aa13.29□□□□□ -0.28
ZNF548-211ENST00000600927 CCNA1P78396 465 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms