RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 PGK1P00558 417 aa17.78■□□□□ 0.44
SHKBP1-226ENST00000600791 SNX17Q15036 470 aa17.78■□□□□ 0.44
SHKBP1-226ENST00000600791 KCTD1Q719H9 257 aa17.78■□□□□ 0.44
SHKBP1-226ENST00000600791 ZNF467Q7Z7K2 595 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-226ENST00000600791 PLEKHM2Q8IWE5 1019 aa17.78■□□□□ 0.44
SHKBP1-226ENST00000600791 FERMT2Q96AC1 680 aa17.78■□□□□ 0.44
SHKBP1-226ENST00000600791 OSBPL3Q9H4L5 887 aa17.78■□□□□ 0.44
SHKBP1-226ENST00000600791 TOMM22Q9NS69 142 aa17.78■□□□□ 0.44
SHKBP1-226ENST00000600791 PHF24Q9UPV7 400 aa17.78■□□□□ 0.44
SHKBP1-226ENST00000600791 PLA2G6O60733 806 aa17.77■□□□□ 0.44
SHKBP1-226ENST00000600791 HAND2P61296 217 aa17.77■□□□□ 0.44
SHKBP1-226ENST00000600791 TRIM60Q495X7 471 aa17.77■□□□□ 0.44
SHKBP1-226ENST00000600791 RRP12Q5JTH9 1297 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-226ENST00000600791 RCSD1Q6JBY9 416 aa17.77■□□□□ 0.44
SHKBP1-226ENST00000600791 RNF180Q86T96 592 aa17.77■□□□□ 0.44
SHKBP1-226ENST00000600791 AGBL1Q96MI9 1066 aa17.77■□□□□ 0.44
SHKBP1-226ENST00000600791 ACAD9Q9H845 621 aa17.77■□□□□ 0.44
SHKBP1-226ENST00000600791 ZHX1Q9UKY1 873 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-226ENST00000600791 MTMR7Q9Y216 660 aa17.77■□□□□ 0.44
SHKBP1-226ENST00000600791 SYNRGQ9UMZ2 1314 aa17.76■□□□□ 0.43
SHKBP1-226ENST00000600791 ADAMTS4O75173 837 aa17.76■□□□□ 0.43
SHKBP1-226ENST00000600791 SDSP20132 328 aa17.76■□□□□ 0.43
SHKBP1-226ENST00000600791 LRIT3Q3SXY7 679 aa17.76■□□□□ 0.43
SHKBP1-226ENST00000600791 RNF146Q9NTX7 359 aa17.76■□□□□ 0.43
SHKBP1-226ENST00000600791 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-226ENST00000600791 PRKAG2Q9UGJ0 569 aa17.76■□□□□ 0.43
SHKBP1-226ENST00000600791 PRR12Q9ULL5 1215 aa17.76■□□□□ 0.43
SHKBP1-226ENST00000600791 LAMA4Q16363 1823 aa17.76■□□□□ 0.43
SHKBP1-226ENST00000600791 SNAP25P60880 206 aa17.75■□□□□ 0.43
SHKBP1-226ENST00000600791 CCDC96Q2M329 555 aa17.75■□□□□ 0.43
SHKBP1-226ENST00000600791 C1orf53Q5VUE5 145 aa17.75■□□□□ 0.43
SHKBP1-226ENST00000600791 CCDC174Q6PII3 467 aa17.75■□□□□ 0.43
SHKBP1-226ENST00000600791 TBC1D10CQ8IV04 446 aa17.75■□□□□ 0.43
SHKBP1-226ENST00000600791 DCAF4Q8WV16 495 aa17.75■□□□□ 0.43
SHKBP1-226ENST00000600791 LBHD1Q9BQE6 289 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-226ENST00000600791 A1CFQ9NQ94 594 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-226ENST00000600791 FAM184BQ9ULE4 1060 aa17.75■□□□□ 0.43
SHKBP1-226ENST00000600791 COL6A3P12111 3177 aa17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 A0A1W2PQ45 241 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 A0A1W2PQY0 241 aa17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 CNTN2Q02246 1040 aa17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 ACVR2BQ13705 512 aa17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 TKFCQ3LXA3 575 aa17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 AKNAD1Q5T1N1 836 aa17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 ARMCX2Q7L311 632 aa17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 FAM133AQ8N9E0 248 aa17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 TMEM47Q9BQJ4 181 aa17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 ABHD16BQ9H3Z7 469 aa17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 TCP11L1Q9NUJ3 509 aa17.74■□□□□ 0.43
SHKBP1-226ENST00000600791 LRRC37A2A6NM11 1700 aa17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 POTEB2H3BUK9 544 aa17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 ADCY6O43306 1168 aa17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 TOP1P11387 765 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 ALAS1P13196 640 aa17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 CWC27Q6UX04 472 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 MFSD6Q6ZSS7 791 aa17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 CCDC144CPQ8IYA2 1237 aa17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 TRERF1Q96PN7 1200 aa17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 KATNBL1Q9H079 304 aa17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 PRDM5Q9NQX1 630 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 PDLIM7Q9NR12 457 aa17.73■□□□□ 0.43
SHKBP1-226ENST00000600791 NEDD4P46934 1319 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 LCTP09848 1927 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 DUSP11O75319 330 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 SLC16A2P36021 539 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 ACLYP53396 1101 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 TLE2Q04725 743 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 CCDC144BQ3MJ40 725 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 MUM1L1Q5H9M0 696 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 TTBK2Q6IQ55 1244 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 GPR153Q6NV75 609 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 KLHDC9Q8NEP7 349 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 TSEN34Q9BSV6 310 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 RANBP17Q9H2T7 1088 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 DIAPH3Q9NSV4 1193 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 CCPG1Q9ULG6 757 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 ASTN1O14525 1302 aa17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 FRMPD2Q68DX3 1309 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-226ENST00000600791 MYADML2A6NDP7 307 aa17.71■□□□□ 0.43
SHKBP1-226ENST00000600791 SOWAHBA6NEL2 793 aa17.71■□□□□ 0.43
SHKBP1-226ENST00000600791 ICAM1P05362 532 aa17.71■□□□□ 0.43
SHKBP1-226ENST00000600791 PDHBP11177 359 aa17.71■□□□□ 0.43
SHKBP1-226ENST00000600791 CCSAPQ6IQ19 270 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-226ENST00000600791 BTNL9Q6UXG8 535 aa17.71■□□□□ 0.43
SHKBP1-226ENST00000600791 SH3RF1Q7Z6J0 888 aa17.71■□□□□ 0.43
SHKBP1-226ENST00000600791 RNF41Q9H4P4 317 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-226ENST00000600791 SUPT16HQ9Y5B9 1047 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-226ENST00000600791 TRIM43BA6NCK2 446 aa17.7■□□□□ 0.42
SHKBP1-226ENST00000600791 MOXD2PA6NHM9 499 aa17.7■□□□□ 0.42
SHKBP1-226ENST00000600791 CST5P28325 142 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-226ENST00000600791 IRX5P78411 483 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-226ENST00000600791 SYDE2Q5VT97 1194 aa17.7■□□□□ 0.42
SHKBP1-226ENST00000600791 TRIM43Q96BQ3 446 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-226ENST00000600791 GPCPD1Q9NPB8 672 aa17.7■□□□□ 0.42
SHKBP1-226ENST00000600791 CYP39A1Q9NYL5 469 aa17.7■□□□□ 0.42
SHKBP1-226ENST00000600791 ASB14A6NK59 587 aa17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 HIP1O00291 1037 aa17.69■□□□□ 0.42
SHKBP1-226ENST00000600791 ZNF213O14771 459 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms