RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 CHST13Q8NET6 341 aa17.02■□□□□ 0.32
LTBP4-228ENST00000600499 SOCS4Q8WXH5 440 aa17.02■□□□□ 0.32
LTBP4-228ENST00000600499 CHMP4CQ96CF2 233 aa17.02■□□□□ 0.32
LTBP4-228ENST00000600499 LZTS2Q9BRK4 669 aa17.02■□□□□ 0.32
LTBP4-228ENST00000600499 MCOLN1Q9GZU1 580 aa17.02■□□□□ 0.32
LTBP4-228ENST00000600499 UBA5Q9GZZ9 404 aa17.02■□□□□ 0.32
LTBP4-228ENST00000600499 MAF1Q9H063 256 aa17.02■□□□□ 0.32
LTBP4-228ENST00000600499 JMJD4Q9H9V9 463 aa17.02■□□□□ 0.32
LTBP4-228ENST00000600499 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.32
LTBP4-228ENST00000600499 GABRQQ9UN88 632 aa17.02■□□□□ 0.32
LTBP4-228ENST00000600499 RIPK3Q9Y572 518 aa17.02■□□□□ 0.32
LTBP4-228ENST00000600499 CYTH3O43739 400 aa17.01■□□□□ 0.31
LTBP4-228ENST00000600499 IGHA2P01877 340 aa17.01■□□□□ 0.31
LTBP4-228ENST00000600499 FLT3LGP49771 235 aa17.01■□□□□ 0.31
LTBP4-228ENST00000600499 GNAQP50148 359 aa17.01■□□□□ 0.31
LTBP4-228ENST00000600499 PRKCZQ05513 592 aa17.01■□□□□ 0.31
LTBP4-228ENST00000600499 TOB2Q14106 344 aaPredicted RBP17.01■□□□□ 0.31
LTBP4-228ENST00000600499 PLS1Q14651 629 aa17.01■□□□□ 0.31
LTBP4-228ENST00000600499 SAMD1Q6SPF0 538 aaPredicted RBP17.01■□□□□ 0.31
LTBP4-228ENST00000600499 CTCFLQ8NI51 663 aaPredicted RBP17.01■□□□□ 0.31
LTBP4-228ENST00000600499 PXYLP1Q8TE99 480 aa17.01■□□□□ 0.31
LTBP4-228ENST00000600499 NUDT12Q9BQG2 462 aa17.01■□□□□ 0.31
LTBP4-228ENST00000600499 SPZ1Q9BXG8 430 aa17.01■□□□□ 0.31
LTBP4-228ENST00000600499 BACH2Q9BYV9 841 aa17.01■□□□□ 0.31
LTBP4-228ENST00000600499 FBXO40Q9UH90 709 aa17.01■□□□□ 0.31
LTBP4-228ENST00000600499 ISY1Q9ULR0 285 aaKnown RBP17.01■□□□□ 0.31
LTBP4-228ENST00000600499 SMCHD1A6NHR9 2005 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 MAP2K5Q13163 448 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 SYNE3Q6ZMZ3 975 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 NBPF11Q86T75 865 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 NCAPG2Q86XI2 1143 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 CCAR1Q8IX12 1150 aaKnown RBP17■□□□□ 0.31
LTBP4-228ENST00000600499 CPXCR1Q8N123 301 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 BRF1Q92994 677 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 AGBL1Q96MI9 1066 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 KIF2CQ99661 725 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 MYL10Q9BUA6 226 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 UPF3BQ9BZI7 483 aaKnown RBP17■□□□□ 0.31
LTBP4-228ENST00000600499 CPVLQ9H3G5 476 aa17■□□□□ 0.31
LTBP4-228ENST00000600499 FAM217BQ9NTX9 383 aaPredicted RBP17■□□□□ 0.31
LTBP4-228ENST00000600499 CTDP1Q9Y5B0 961 aaPredicted RBP17■□□□□ 0.31
LTBP4-228ENST00000600499 HTTP42858 3142 aa16.99■□□□□ 0.31
LTBP4-228ENST00000600499 KLF18A0A0U1RQI7 1052 aa16.99■□□□□ 0.31
LTBP4-228ENST00000600499 ZBTB43O43298 467 aa16.99■□□□□ 0.31
LTBP4-228ENST00000600499 IL27Q8NEV9 243 aa16.99■□□□□ 0.31
LTBP4-228ENST00000600499 C22orf23Q9BZE7 217 aa16.99■□□□□ 0.31
LTBP4-228ENST00000600499 PDRG1Q9NUG6 133 aa16.99■□□□□ 0.31
LTBP4-228ENST00000600499 RBM28Q9NW13 759 aaKnown RBP16.99■□□□□ 0.31
LTBP4-228ENST00000600499 HPS5Q9UPZ3 1129 aa16.99■□□□□ 0.31
LTBP4-228ENST00000600499 PTCH2Q9Y6C5 1203 aa16.99■□□□□ 0.31
LTBP4-228ENST00000600499 IVNS1ABPQ9Y6Y0 642 aa16.99■□□□□ 0.31
LTBP4-228ENST00000600499 ZNFX1Q9P2E3 1918 aaKnown RBP16.99■□□□□ 0.31
LTBP4-228ENST00000600499 ZBTB5O15062 677 aa16.98■□□□□ 0.31
LTBP4-228ENST00000600499 FCER1AP12319 257 aa16.98■□□□□ 0.31
LTBP4-228ENST00000600499 RGS2P41220 211 aa16.98■□□□□ 0.31
LTBP4-228ENST00000600499 SNAP25P60880 206 aa16.98■□□□□ 0.31
LTBP4-228ENST00000600499 APOBRQ0VD83 1088 aa16.98■□□□□ 0.31
LTBP4-228ENST00000600499 FUT2Q10981 343 aa16.98■□□□□ 0.31
LTBP4-228ENST00000600499 CDC37Q16543 378 aaPredicted RBP16.98■□□□□ 0.31
LTBP4-228ENST00000600499 QRICH1Q2TAL8 776 aa16.98■□□□□ 0.31
LTBP4-228ENST00000600499 TMTC3Q6ZXV5 915 aa16.98■□□□□ 0.31
LTBP4-228ENST00000600499 SRBD1Q8N5C6 995 aaKnown RBP16.98■□□□□ 0.31
LTBP4-228ENST00000600499 ARMC5Q96C12 935 aa16.98■□□□□ 0.31
LTBP4-228ENST00000600499 ZNF274Q96GC6 653 aaPredicted RBP16.98■□□□□ 0.31
LTBP4-228ENST00000600499 CCPG1Q9ULG6 757 aa16.98■□□□□ 0.31
LTBP4-228ENST00000600499 DIS3Q9Y2L1 958 aaKnown RBP16.98■□□□□ 0.31
LTBP4-228ENST00000600499 BAZ2BQ9UIF8 2168 aaKnown RBP16.97■□□□□ 0.31
LTBP4-228ENST00000600499 DNAJC25-GNG10A0A024R161 153 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 ADORA2AP29274 412 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 PDIA3P30101 505 aaKnown RBP16.97■□□□□ 0.31
LTBP4-228ENST00000600499 FGD1P98174 961 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 CCDC174Q6PII3 467 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 MICU3Q86XE3 530 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 TRMT44Q8IYL2 757 aaKnown RBP16.97■□□□□ 0.31
LTBP4-228ENST00000600499 SLAIN1Q8ND83 568 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 RGS22Q8NE09 1264 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 RAET1EQ8TD07 263 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 TRERF1Q96PN7 1200 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 APBA2Q99767 749 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 ACAD9Q9H845 621 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 RNF146Q9NTX7 359 aa16.97■□□□□ 0.31
LTBP4-228ENST00000600499 PNMA6FA0A0J9YX94 578 aa16.96■□□□□ 0.31
LTBP4-228ENST00000600499 COBLO75128 1261 aa16.96■□□□□ 0.31
LTBP4-228ENST00000600499 PLEKHA8P1O95397 391 aa16.96■□□□□ 0.31
LTBP4-228ENST00000600499 RXRAP19793 462 aa16.96■□□□□ 0.31
LTBP4-228ENST00000600499 GHRHRQ02643 423 aa16.96■□□□□ 0.31
LTBP4-228ENST00000600499 TRAF1Q13077 416 aa16.96■□□□□ 0.31
LTBP4-228ENST00000600499 KCTD2Q14681 263 aa16.96■□□□□ 0.31
LTBP4-228ENST00000600499 ANKRD1Q15327 319 aa16.96■□□□□ 0.31
LTBP4-228ENST00000600499 RTN1Q16799 776 aa16.96■□□□□ 0.31
LTBP4-228ENST00000600499 CLEC4DQ8WXI8 215 aa16.96■□□□□ 0.31
LTBP4-228ENST00000600499 MMP19Q99542 508 aa16.96■□□□□ 0.31
LTBP4-228ENST00000600499 CCDC196A0A1B0GTZ2 297 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 ADCY3O60266 1144 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 PPP1R11O60927 126 aaPredicted RBP16.95■□□□□ 0.3
LTBP4-228ENST00000600499 ECM2O94769 699 aaPredicted RBP16.95■□□□□ 0.3
LTBP4-228ENST00000600499 ALAS1P13196 640 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 CDC27P30260 824 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 GRK4P32298 578 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms