RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CCNA1P78396 465 aa16.02■□□□□ 0.16
VRK3-219ENST00000600137 FUT2Q10981 343 aa16.02■□□□□ 0.16
VRK3-219ENST00000600137 IKQ13123 557 aaPredicted RBP16.02■□□□□ 0.16
VRK3-219ENST00000600137 PLS1Q14651 629 aa16.02■□□□□ 0.16
VRK3-219ENST00000600137 SNRNP48Q6IEG0 339 aaKnown RBP16.02■□□□□ 0.16
VRK3-219ENST00000600137 PLEKHH3Q7Z736 793 aa16.02■□□□□ 0.16
VRK3-219ENST00000600137 SRBD1Q8N5C6 995 aaKnown RBP16.02■□□□□ 0.16
VRK3-219ENST00000600137 ISY1Q9ULR0 285 aaKnown RBP16.02■□□□□ 0.16
VRK3-219ENST00000600137 PTPN22Q9Y2R2 807 aa16.02■□□□□ 0.16
VRK3-219ENST00000600137 TNPO2O14787 897 aaKnown RBP16.01■□□□□ 0.15
VRK3-219ENST00000600137 PPP1R11O60927 126 aaPredicted RBP16.01■□□□□ 0.15
VRK3-219ENST00000600137 PLEKHA8P1O95397 391 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 ICAM1P05362 532 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 CALM1P0DP23 149 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 CALM2P0DP24 149 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 CALM3P0DP25 149 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 SMARCA1P28370 1054 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 CDC27P30260 824 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 RCAN1P53805 252 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 PRKCZQ05513 592 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 CCDC174Q6PII3 467 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 CCDC144CPQ8IYA2 1237 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 LARP6Q9BRS8 491 aaKnown RBP16.01■□□□□ 0.15
VRK3-219ENST00000600137 MCOLN1Q9GZU1 580 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 MROH8Q9H579 483 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 VAT1LQ9HCJ6 419 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 PDRG1Q9NUG6 133 aa16.01■□□□□ 0.15
VRK3-219ENST00000600137 NID2Q14112 1375 aa16■□□□□ 0.15
VRK3-219ENST00000600137 ZBTB43O43298 467 aa16■□□□□ 0.15
VRK3-219ENST00000600137 IGHA2P01877 340 aa16■□□□□ 0.15
VRK3-219ENST00000600137 PDIA3P30101 505 aaKnown RBP16■□□□□ 0.15
VRK3-219ENST00000600137 FLT3LGP49771 235 aa16■□□□□ 0.15
VRK3-219ENST00000600137 GRB14Q14449 540 aa16■□□□□ 0.15
VRK3-219ENST00000600137 ARHGEF6Q15052 776 aa16■□□□□ 0.15
VRK3-219ENST00000600137 QRICH1Q2TAL8 776 aa16■□□□□ 0.15
VRK3-219ENST00000600137 MICU3Q86XE3 530 aa16■□□□□ 0.15
VRK3-219ENST00000600137 CMTR1Q8N1G2 835 aaKnown RBP16■□□□□ 0.15
VRK3-219ENST00000600137 TBC1D32Q96NH3 1257 aa16■□□□□ 0.15
VRK3-219ENST00000600137 SPZ1Q9BXG8 430 aa16■□□□□ 0.15
VRK3-219ENST00000600137 PTCH2Q9Y6C5 1203 aa16■□□□□ 0.15
VRK3-219ENST00000600137 CENPFP49454 3210 aa16■□□□□ 0.15
VRK3-219ENST00000600137 MYH6P13533 1939 aa16■□□□□ 0.15
VRK3-219ENST00000600137 SLC15A5A6NIM6 579 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 STRNO43815 780 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 COBLO75128 1261 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 ADD1P35611 737 aaKnown RBP15.99■□□□□ 0.15
VRK3-219ENST00000600137 AK2P54819 239 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 PRMT2P55345 433 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 IRF5Q13568 498 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 NTRK3Q16288 839 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 PKN2Q16513 984 aaKnown RBP15.99■□□□□ 0.15
VRK3-219ENST00000600137 CDC37Q16543 378 aaPredicted RBP15.99■□□□□ 0.15
VRK3-219ENST00000600137 MUM1L1Q5H9M0 696 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 FBXO46Q6PJ61 603 aaPredicted RBP15.99■□□□□ 0.15
VRK3-219ENST00000600137 TMTC3Q6ZXV5 915 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 NCAPG2Q86XI2 1143 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 ABRAQ8N0Z2 381 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
VRK3-219ENST00000600137 CLEC4DQ8WXI8 215 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 COA7Q96BR5 231 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 PIGSQ96S52 555 aa15.99■□□□□ 0.15
VRK3-219ENST00000600137 ZNF236Q9UL36 1845 aa15.98■□□□□ 0.15
VRK3-219ENST00000600137 HOXC6P09630 235 aa15.98■□□□□ 0.15
VRK3-219ENST00000600137 HOXD10P28358 340 aa15.98■□□□□ 0.15
VRK3-219ENST00000600137 KIF5BP33176 963 aa15.98■□□□□ 0.15
VRK3-219ENST00000600137 NEK4P51957 841 aa15.98■□□□□ 0.15
VRK3-219ENST00000600137 CHST13Q8NET6 341 aa15.98■□□□□ 0.15
VRK3-219ENST00000600137 ZNF274Q96GC6 653 aaPredicted RBP15.98■□□□□ 0.15
VRK3-219ENST00000600137 TRERF1Q96PN7 1200 aa15.98■□□□□ 0.15
VRK3-219ENST00000600137 LZTS2Q9BRK4 669 aa15.98■□□□□ 0.15
VRK3-219ENST00000600137 TPCN1Q9ULQ1 816 aa15.98■□□□□ 0.15
VRK3-219ENST00000600137 DNAJC25-GNG10A0A024R161 153 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 ZBTB5O15062 677 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 ALAS1P13196 640 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 ADORA2AP29274 412 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 COPB2P35606 906 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 GNAQP50148 359 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 FGD1P98174 961 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 MAP2K5Q13163 448 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 RTN1Q16799 776 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 TKFCQ3LXA3 575 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 SYNE3Q6ZMZ3 975 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 NPLOC4Q8TAT6 608 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 NUDT12Q9BQG2 462 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 RNF146Q9NTX7 359 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 CCPG1Q9ULG6 757 aa15.97■□□□□ 0.15
VRK3-219ENST00000600137 CTDP1Q9Y5B0 961 aaPredicted RBP15.97■□□□□ 0.15
VRK3-219ENST00000600137 PNMA6FA0A0J9YX94 578 aa15.96■□□□□ 0.15
VRK3-219ENST00000600137 GOLGA8AA7E2F4 631 aa15.96■□□□□ 0.15
VRK3-219ENST00000600137 GOLGA8BA8MQT2 603 aa15.96■□□□□ 0.15
VRK3-219ENST00000600137 OPLAHO14841 1288 aa15.96■□□□□ 0.15
VRK3-219ENST00000600137 FCER1AP12319 257 aa15.96■□□□□ 0.15
VRK3-219ENST00000600137 XRCC5P13010 732 aaKnown RBP15.96■□□□□ 0.15
VRK3-219ENST00000600137 CYP2B6P20813 491 aa15.96■□□□□ 0.15
VRK3-219ENST00000600137 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
VRK3-219ENST00000600137 PPP2R5BQ15173 497 aa15.96■□□□□ 0.15
VRK3-219ENST00000600137 WDR78Q5VTH9 848 aa15.96■□□□□ 0.15
VRK3-219ENST00000600137 CCAR1Q8IX12 1150 aaKnown RBP15.96■□□□□ 0.15
VRK3-219ENST00000600137 CCDC82Q8N4S0 544 aa15.96■□□□□ 0.15
VRK3-219ENST00000600137 TBC1D5Q92609 795 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms