RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-227ENST00000600026 KIF5BP33176 963 aa25.5■■□□□ 1.67
LTBP4-227ENST00000600026 SNAP25P60880 206 aa25.5■■□□□ 1.67
LTBP4-227ENST00000600026 PLS1Q14651 629 aa25.5■■□□□ 1.67
LTBP4-227ENST00000600026 ERO1AQ96HE7 468 aa25.5■■□□□ 1.67
LTBP4-227ENST00000600026 ARHGAP39Q9C0H5 1083 aa25.5■■□□□ 1.67
LTBP4-227ENST00000600026 SPATC1LQ9H0A9 340 aa25.5■■□□□ 1.67
LTBP4-227ENST00000600026 RANBP17Q9H2T7 1088 aaKnown RBP25.5■■□□□ 1.67
LTBP4-227ENST00000600026 CTDP1Q9Y5B0 961 aaPredicted RBP25.5■■□□□ 1.67
LTBP4-227ENST00000600026 NID2Q14112 1375 aa25.49■■□□□ 1.67
LTBP4-227ENST00000600026 CCDC196A0A1B0GTZ2 297 aa25.49■■□□□ 1.67
LTBP4-227ENST00000600026 CTGFP29279 349 aa25.49■■□□□ 1.67
LTBP4-227ENST00000600026 CAP1Q01518 475 aa25.49■■□□□ 1.67
LTBP4-227ENST00000600026 RTN1Q16799 776 aa25.49■■□□□ 1.67
LTBP4-227ENST00000600026 FANCBQ8NB91 859 aa25.49■■□□□ 1.67
LTBP4-227ENST00000600026 RBM28Q9NW13 759 aaKnown RBP25.49■■□□□ 1.67
LTBP4-227ENST00000600026 HPS5Q9UPZ3 1129 aa25.49■■□□□ 1.67
LTBP4-227ENST00000600026 DHX16O60231 1041 aaKnown RBP25.48■■□□□ 1.67
LTBP4-227ENST00000600026 LARGE1O95461 756 aa25.48■■□□□ 1.67
LTBP4-227ENST00000600026 CCT2P78371 535 aaKnown RBP25.48■■□□□ 1.67
LTBP4-227ENST00000600026 SLC35G1Q2M3R5 365 aa25.48■■□□□ 1.67
LTBP4-227ENST00000600026 CCDC174Q6PII3 467 aa25.48■■□□□ 1.67
LTBP4-227ENST00000600026 ADGRF4Q8IZF3 695 aa25.48■■□□□ 1.67
LTBP4-227ENST00000600026 MOV10L1Q9BXT6 1211 aaKnown RBP25.48■■□□□ 1.67
LTBP4-227ENST00000600026 PORCNQ9H237 461 aa25.48■■□□□ 1.67
LTBP4-227ENST00000600026 RAVER2Q9HCJ3 691 aaKnown RBP25.48■■□□□ 1.67
LTBP4-227ENST00000600026 ZNF536O15090 1300 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 PLEKHA8P1O95397 391 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 GNAQP50148 359 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 OAZ1P54368 228 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 CCNA1P78396 465 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 KIF22Q14807 665 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 SNRNP48Q6IEG0 339 aaKnown RBP25.47■■□□□ 1.67
LTBP4-227ENST00000600026 CPLX2Q6PUV4 134 aaKnown RBP25.47■■□□□ 1.67
LTBP4-227ENST00000600026 NBPF11Q86T75 865 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 CPXCR1Q8N123 301 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 GTF3C6Q969F1 213 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 TEX13BQ9BXU2 312 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 EFCC1Q9HA90 598 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 DOCK3Q8IZD9 2030 aa25.47■■□□□ 1.67
LTBP4-227ENST00000600026 BAZ2BQ9UIF8 2168 aaKnown RBP25.46■■□□□ 1.67
LTBP4-227ENST00000600026 SMCHD1A6NHR9 2005 aa25.46■■□□□ 1.67
LTBP4-227ENST00000600026 CPLX1O14810 134 aa25.46■■□□□ 1.67
LTBP4-227ENST00000600026 ATP2A1O14983 1001 aa25.46■■□□□ 1.67
LTBP4-227ENST00000600026 STAT3P40763 770 aa25.46■■□□□ 1.67
LTBP4-227ENST00000600026 PSMC4P43686 418 aa25.46■■□□□ 1.67
LTBP4-227ENST00000600026 FCGRTP55899 365 aa25.46■■□□□ 1.67
LTBP4-227ENST00000600026 RIOX2Q8IUF8 465 aa25.46■■□□□ 1.67
LTBP4-227ENST00000600026 NECAB1Q8N987 351 aa25.46■■□□□ 1.67
LTBP4-227ENST00000600026 JMJD4Q9H9V9 463 aa25.46■■□□□ 1.67
LTBP4-227ENST00000600026 VAT1LQ9HCJ6 419 aa25.46■■□□□ 1.67
LTBP4-227ENST00000600026 DAXXQ9UER7 740 aaPredicted RBP25.46■■□□□ 1.67
LTBP4-227ENST00000600026 CYTH3O43739 400 aa25.45■■□□□ 1.66
LTBP4-227ENST00000600026 SCRN1Q12765 414 aa25.45■■□□□ 1.66
LTBP4-227ENST00000600026 CDC37Q16543 378 aaPredicted RBP25.45■■□□□ 1.66
LTBP4-227ENST00000600026 TMTC3Q6ZXV5 915 aa25.45■■□□□ 1.66
LTBP4-227ENST00000600026 CCDC83Q8IWF9 413 aa25.45■■□□□ 1.66
LTBP4-227ENST00000600026 CMTR1Q8N1G2 835 aaKnown RBP25.45■■□□□ 1.66
LTBP4-227ENST00000600026 SHCBP1Q8NEM2 672 aa25.45■■□□□ 1.66
LTBP4-227ENST00000600026 TRIM47Q96LD4 638 aa25.45■■□□□ 1.66
LTBP4-227ENST00000600026 RIOX1Q9H6W3 641 aa25.45■■□□□ 1.66
LTBP4-227ENST00000600026 FMNL1O95466 1100 aaPredicted RBP25.44■■□□□ 1.66
LTBP4-227ENST00000600026 ERCC3P19447 782 aa25.44■■□□□ 1.66
LTBP4-227ENST00000600026 CDC27P30260 824 aa25.44■■□□□ 1.66
LTBP4-227ENST00000600026 MAPK4P31152 587 aa25.44■■□□□ 1.66
LTBP4-227ENST00000600026 CCAR1Q8IX12 1150 aaKnown RBP25.44■■□□□ 1.66
LTBP4-227ENST00000600026 SRBD1Q8N5C6 995 aaKnown RBP25.44■■□□□ 1.66
LTBP4-227ENST00000600026 AGBL1Q96MI9 1066 aa25.44■■□□□ 1.66
LTBP4-227ENST00000600026 LZTS2Q9BRK4 669 aa25.44■■□□□ 1.66
LTBP4-227ENST00000600026 SPZ1Q9BXG8 430 aa25.44■■□□□ 1.66
LTBP4-227ENST00000600026 NCOA5Q9HCD5 579 aaKnown RBP25.44■■□□□ 1.66
LTBP4-227ENST00000600026 FAM217BQ9NTX9 383 aaPredicted RBP25.44■■□□□ 1.66
LTBP4-227ENST00000600026 ZNF236Q9UL36 1845 aa25.44■■□□□ 1.66
LTBP4-227ENST00000600026 RBBP6Q7Z6E9 1792 aaKnown RBP25.44■■□□□ 1.66
LTBP4-227ENST00000600026 TNPO2O14787 897 aaKnown RBP25.43■■□□□ 1.66
LTBP4-227ENST00000600026 SLC25A27O95847 323 aa25.43■■□□□ 1.66
LTBP4-227ENST00000600026 ICAM1P05362 532 aa25.43■■□□□ 1.66
LTBP4-227ENST00000600026 HSP90AA1P07900 732 aaKnown RBP25.43■■□□□ 1.66
LTBP4-227ENST00000600026 TAL1P17542 331 aaPredicted RBP25.43■■□□□ 1.66
LTBP4-227ENST00000600026 ADD1P35611 737 aaKnown RBP25.43■■□□□ 1.66
LTBP4-227ENST00000600026 SLC4A3P48751 1232 aa25.43■■□□□ 1.66
LTBP4-227ENST00000600026 QRICH1Q2TAL8 776 aa25.43■■□□□ 1.66
LTBP4-227ENST00000600026 WDR78Q5VTH9 848 aa25.43■■□□□ 1.66
LTBP4-227ENST00000600026 NCAPG2Q86XI2 1143 aa25.43■■□□□ 1.66
LTBP4-227ENST00000600026 MTMR8Q96EF0 704 aa25.43■■□□□ 1.66
LTBP4-227ENST00000600026 RIPK3Q9Y572 518 aa25.43■■□□□ 1.66
LTBP4-227ENST00000600026 ZNFX1Q9P2E3 1918 aaKnown RBP25.42■■□□□ 1.66
LTBP4-227ENST00000600026 CDKL5O76039 1030 aa25.42■■□□□ 1.66
LTBP4-227ENST00000600026 SMARCA1P28370 1054 aa25.42■■□□□ 1.66
LTBP4-227ENST00000600026 COPB2P35606 906 aa25.42■■□□□ 1.66
LTBP4-227ENST00000600026 CUL4AQ13619 759 aa25.42■■□□□ 1.66
LTBP4-227ENST00000600026 GPR142Q7Z601 462 aa25.42■■□□□ 1.66
LTBP4-227ENST00000600026 HOMER1Q86YM7 354 aa25.42■■□□□ 1.66
LTBP4-227ENST00000600026 PIGSQ96S52 555 aa25.42■■□□□ 1.66
LTBP4-227ENST00000600026 MCOLN1Q9GZU1 580 aa25.42■■□□□ 1.66
LTBP4-227ENST00000600026 MROH8Q9H579 483 aa25.42■■□□□ 1.66
LTBP4-227ENST00000600026 CWC22Q9HCG8 908 aaKnown RBP25.42■■□□□ 1.66
LTBP4-227ENST00000600026 CCPG1Q9ULG6 757 aa25.42■■□□□ 1.66
LTBP4-227ENST00000600026 CNTNAP5Q8WYK1 1306 aa25.41■■□□□ 1.66
LTBP4-227ENST00000600026 OTOP1Q7RTM1 612 aa25.41■■□□□ 1.66
LTBP4-227ENST00000600026 TRIM17Q9Y577 477 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms