RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 TINF2Q9BSI4 451 aa26.53■■□□□ 1.84
CCDC9-204ENST00000599398 UBAC1Q9BSL1 405 aa26.53■■□□□ 1.84
CCDC9-204ENST00000599398 C11orf49Q9H6J7 331 aa26.53■■□□□ 1.84
CCDC9-204ENST00000599398 ACAD9Q9H845 621 aa26.53■■□□□ 1.84
CCDC9-204ENST00000599398 KAT14Q9H8E8 782 aa26.53■■□□□ 1.84
CCDC9-204ENST00000599398 RNF146Q9NTX7 359 aa26.53■■□□□ 1.84
CCDC9-204ENST00000599398 ZNF536O15090 1300 aa26.53■■□□□ 1.84
CCDC9-204ENST00000599398 MNX1P50219 401 aaPredicted RBP26.52■■□□□ 1.84
CCDC9-204ENST00000599398 TRDNQ13061 729 aa26.52■■□□□ 1.84
CCDC9-204ENST00000599398 BTNL9Q6UXG8 535 aa26.52■■□□□ 1.84
CCDC9-204ENST00000599398 PNMA1Q8ND90 353 aa26.52■■□□□ 1.84
CCDC9-204ENST00000599398 TNKSO95271 1327 aa26.51■■□□□ 1.83
CCDC9-204ENST00000599398 CYP21A2P08686 494 aa26.51■■□□□ 1.83
CCDC9-204ENST00000599398 ZNF543Q08ER8 600 aa26.51■■□□□ 1.83
CCDC9-204ENST00000599398 TKFCQ3LXA3 575 aa26.51■■□□□ 1.83
CCDC9-204ENST00000599398 ANO1Q5XXA6 986 aa26.51■■□□□ 1.83
CCDC9-204ENST00000599398 KIAA1211Q6ZU35 1233 aa26.51■■□□□ 1.83
CCDC9-204ENST00000599398 ENAHQ8N8S7 591 aaPredicted RBP26.51■■□□□ 1.83
CCDC9-204ENST00000599398 TRERF1Q96PN7 1200 aa26.51■■□□□ 1.83
CCDC9-204ENST00000599398 CCPG1Q9ULG6 757 aa26.51■■□□□ 1.83
CCDC9-204ENST00000599398 SMCHD1A6NHR9 2005 aa26.5■■□□□ 1.83
CCDC9-204ENST00000599398 DNAJC25-GNG10A0A024R161 153 aa26.5■■□□□ 1.83
CCDC9-204ENST00000599398 H0YGN5 161 aa26.5■■□□□ 1.83
CCDC9-204ENST00000599398 SEPT4O43236 478 aa26.5■■□□□ 1.83
CCDC9-204ENST00000599398 NEFLP07196 543 aa26.5■■□□□ 1.83
CCDC9-204ENST00000599398 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.5■■□□□ 1.83
CCDC9-204ENST00000599398 RANBP17Q9H2T7 1088 aaKnown RBP26.5■■□□□ 1.83
CCDC9-204ENST00000599398 EVI5O60447 810 aa26.49■■□□□ 1.83
CCDC9-204ENST00000599398 GOLGA8HP0CJ92 632 aa26.49■■□□□ 1.83
CCDC9-204ENST00000599398 SNHG28P0DPA3 235 aa26.49■■□□□ 1.83
CCDC9-204ENST00000599398 ANKS1AQ92625 1134 aa26.49■■□□□ 1.83
CCDC9-204ENST00000599398 CNPY2Q9Y2B0 182 aa26.49■■□□□ 1.83
CCDC9-204ENST00000599398 NR2E3Q9Y5X4 410 aa26.49■■□□□ 1.83
CCDC9-204ENST00000599398 ALPK3Q96L96 1907 aa26.48■■□□□ 1.83
CCDC9-204ENST00000599398 ICAM1P05362 532 aa26.48■■□□□ 1.83
CCDC9-204ENST00000599398 BMP2KLQ5H9B9 411 aa26.48■■□□□ 1.83
CCDC9-204ENST00000599398 GPATCH4Q5T3I0 446 aaKnown RBP26.48■■□□□ 1.83
CCDC9-204ENST00000599398 NRBP1Q9UHY1 535 aa26.48■■□□□ 1.83
CCDC9-204ENST00000599398 MYCNP04198 464 aaPredicted RBP26.47■■□□□ 1.83
CCDC9-204ENST00000599398 TAL1P17542 331 aaPredicted RBP26.47■■□□□ 1.83
CCDC9-204ENST00000599398 IFIT1BQ5T764 474 aaKnown RBP26.47■■□□□ 1.83
CCDC9-204ENST00000599398 CYB5R4Q7L1T6 521 aa26.47■■□□□ 1.83
CCDC9-204ENST00000599398 RALYLQ86SE5 291 aaKnown RBP26.47■■□□□ 1.83
CCDC9-204ENST00000599398 MSL3Q8N5Y2 521 aaKnown RBP26.47■■□□□ 1.83
CCDC9-204ENST00000599398 MAP4K1Q92918 833 aa26.47■■□□□ 1.83
CCDC9-204ENST00000599398 A1CFQ9NQ94 594 aaKnown RBP26.47■■□□□ 1.83
CCDC9-204ENST00000599398 RBM8AQ9Y5S9 174 aaKnown RBP26.47■■□□□ 1.83
CCDC9-204ENST00000599398 MCM3APO60318 1980 aa26.47■■□□□ 1.83
CCDC9-204ENST00000599398 POTEB2H3BUK9 544 aa26.46■■□□□ 1.83
CCDC9-204ENST00000599398 MUM1L1Q5H9M0 696 aa26.46■■□□□ 1.83
CCDC9-204ENST00000599398 ZNF467Q7Z7K2 595 aaPredicted RBP26.46■■□□□ 1.83
CCDC9-204ENST00000599398 ESYT1Q9BSJ8 1104 aa26.46■■□□□ 1.83
CCDC9-204ENST00000599398 PFASO15067 1338 aa26.45■■□□□ 1.83
CCDC9-204ENST00000599398 SYNGAP1Q96PV0 1343 aa26.45■■□□□ 1.83
CCDC9-204ENST00000599398 E7EWF7 191 aa26.45■■□□□ 1.82
CCDC9-204ENST00000599398 CNTN2Q02246 1040 aa26.45■■□□□ 1.82
CCDC9-204ENST00000599398 NSMFQ6X4W1 530 aa26.45■■□□□ 1.82
CCDC9-204ENST00000599398 UBA5Q9GZZ9 404 aa26.45■■□□□ 1.82
CCDC9-204ENST00000599398 TAF6LQ9Y6J9 622 aa26.45■■□□□ 1.82
CCDC9-204ENST00000599398 GJC2Q5T442 439 aaPredicted RBP26.44■■□□□ 1.82
CCDC9-204ENST00000599398 MAMDC4Q6UXC1 1216 aa26.44■■□□□ 1.82
CCDC9-204ENST00000599398 ARRDC4Q8NCT1 418 aa26.44■■□□□ 1.82
CCDC9-204ENST00000599398 NCOA7Q8NI08 942 aa26.44■■□□□ 1.82
CCDC9-204ENST00000599398 CPVLQ9H3G5 476 aa26.44■■□□□ 1.82
CCDC9-204ENST00000599398 ZHX1Q9UKY1 873 aaPredicted RBP26.44■■□□□ 1.82
CCDC9-204ENST00000599398 DNM1LO00429 736 aa26.43■■□□□ 1.82
CCDC9-204ENST00000599398 SNAI1O95863 264 aaPredicted RBP26.43■■□□□ 1.82
CCDC9-204ENST00000599398 PARP1P09874 1014 aaKnown RBP26.43■■□□□ 1.82
CCDC9-204ENST00000599398 ZNF865P0CJ78 1059 aaPredicted RBP26.43■■□□□ 1.82
CCDC9-204ENST00000599398 RARBP10826 455 aa26.43■■□□□ 1.82
CCDC9-204ENST00000599398 COL6A1P12109 1028 aa26.43■■□□□ 1.82
CCDC9-204ENST00000599398 ASPRV1Q53RT3 343 aa26.43■■□□□ 1.82
CCDC9-204ENST00000599398 C7orf61Q8IZ16 206 aa26.43■■□□□ 1.82
CCDC9-204ENST00000599398 FGD4Q96M96 766 aa26.43■■□□□ 1.82
CCDC9-204ENST00000599398 SENP6Q9GZR1 1112 aaPredicted RBP26.43■■□□□ 1.82
CCDC9-204ENST00000599398 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.43■■□□□ 1.82
CCDC9-204ENST00000599398 ERICH2A1L162 156 aa26.42■■□□□ 1.82
CCDC9-204ENST00000599398 KBTBD13C9JR72 458 aa26.42■■□□□ 1.82
CCDC9-204ENST00000599398 IFIT3O14879 490 aaKnown RBP26.42■■□□□ 1.82
CCDC9-204ENST00000599398 AKR1A1P14550 325 aa26.42■■□□□ 1.82
CCDC9-204ENST00000599398 SEC23AQ15436 765 aa26.42■■□□□ 1.82
CCDC9-204ENST00000599398 STOX1Q6ZVD7 989 aa26.42■■□□□ 1.82
CCDC9-204ENST00000599398 ARMCX2Q7L311 632 aa26.42■■□□□ 1.82
CCDC9-204ENST00000599398 FAM133AQ8N9E0 248 aa26.42■■□□□ 1.82
CCDC9-204ENST00000599398 LSG1Q9H089 658 aaKnown RBP26.42■■□□□ 1.82
CCDC9-204ENST00000599398 ANO2Q9NQ90 1003 aa26.42■■□□□ 1.82
CCDC9-204ENST00000599398 PNMA2Q9UL42 364 aa26.42■■□□□ 1.82
CCDC9-204ENST00000599398 DHX16O60231 1041 aaKnown RBP26.41■■□□□ 1.82
CCDC9-204ENST00000599398 CHST3Q7LGC8 479 aa26.41■■□□□ 1.82
CCDC9-204ENST00000599398 CCDC144CPQ8IYA2 1237 aa26.41■■□□□ 1.82
CCDC9-204ENST00000599398 XPNPEP3Q9NQH7 507 aa26.41■■□□□ 1.82
CCDC9-204ENST00000599398 CYP39A1Q9NYL5 469 aa26.41■■□□□ 1.82
CCDC9-204ENST00000599398 SART3Q15020 963 aaKnown RBP26.4■■□□□ 1.82
CCDC9-204ENST00000599398 CASC1Q6TDU7 716 aa26.4■■□□□ 1.82
CCDC9-204ENST00000599398 FAM184BQ9ULE4 1060 aa26.4■■□□□ 1.82
CCDC9-204ENST00000599398 PTPDC1A2A3K4 754 aa26.39■■□□□ 1.82
CCDC9-204ENST00000599398 SOWAHBA6NEL2 793 aa26.39■■□□□ 1.82
CCDC9-204ENST00000599398 NFIBO00712 420 aa26.39■■□□□ 1.82
CCDC9-204ENST00000599398 ACVR2BQ13705 512 aa26.39■■□□□ 1.82
CCDC9-204ENST00000599398 LRRC41Q15345 812 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms