RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 RASSF7Q02833 373 aa12.96□□□□□ -0.34
SCN8A-208ENST00000599343 PLCB4Q15147 1175 aa12.96□□□□□ -0.34
SCN8A-208ENST00000599343 ZNF148Q9UQR1 794 aa12.96□□□□□ -0.34
SCN8A-208ENST00000599343 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.34
SCN8A-208ENST00000599343 RPN1P04843 607 aaKnown RBP12.95□□□□□ -0.34
SCN8A-208ENST00000599343 YWHAGP61981 247 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCN8A-208ENST00000599343 EHHADHQ08426 723 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 XKR9Q5GH70 373 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 PPP1R9AQ9ULJ8 1098 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 TPCN1Q9ULQ1 816 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 THRAP3Q9Y2W1 955 aaKnown RBP12.95□□□□□ -0.34
SCN8A-208ENST00000599343 CLIC4Q9Y696 253 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 BZW2Q9Y6E2 419 aaKnown RBP12.95□□□□□ -0.34
SCN8A-208ENST00000599343 NDUFA8P51970 172 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 RASIP1Q5U651 963 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 LRGUKQ96M69 825 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 A0A0D9SFI3 127 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 ECE1P42892 770 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 TSTA3Q13630 321 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-208ENST00000599343 CCDC127Q96BQ5 260 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 TRIM4Q9C037 500 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 TYW1Q9NV66 732 aaKnown RBP12.95□□□□□ -0.34
SCN8A-208ENST00000599343 USP40Q9NVE5 1235 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 NUP160Q12769 1436 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 TNNC2P02585 160 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 SLC8A1P32418 973 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 RNF168Q8IYW5 571 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-208ENST00000599343 CHAMP1Q96JM3 812 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 PSTPIP2Q9H939 334 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 ATP8A2Q9NTI2 1148 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 USP17L12C9JPN9 530 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 USP17L21D6R901 530 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 ZMYND10O75800 440 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 INPP1P49441 399 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 LRRC47Q8N1G4 583 aaKnown RBP12.95□□□□□ -0.34
SCN8A-208ENST00000599343 SKA2Q8WVK7 121 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-208ENST00000599343 PYCARDQ9ULZ3 195 aa12.95□□□□□ -0.34
SCN8A-208ENST00000599343 TOM1O60784 492 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 TCP1P17987 556 aaKnown RBP12.94□□□□□ -0.34
SCN8A-208ENST00000599343 PKP1Q13835 747 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 SDR42E1Q8WUS8 393 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 MLXIPQ9HAP2 919 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.94□□□□□ -0.34
SCN8A-208ENST00000599343 BAG5Q9UL15 447 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 PCDHA12Q9UN75 941 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 CD2APQ9Y5K6 639 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 H7C0C1 242 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 ADD1P35611 737 aaKnown RBP12.94□□□□□ -0.34
SCN8A-208ENST00000599343 ATP5OP48047 213 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 ADAM9Q13443 819 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 GPT2Q8TD30 523 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 HAUS1Q96CS2 278 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 ARPP21Q9UBL0 812 aaPredicted RBP12.94□□□□□ -0.34
SCN8A-208ENST00000599343 DDX25Q9UHL0 483 aaKnown RBP12.94□□□□□ -0.34
SCN8A-208ENST00000599343 ZMYM6O95789 1325 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 SART1O43290 800 aaKnown RBP12.94□□□□□ -0.34
SCN8A-208ENST00000599343 CNGA1P29973 690 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 IFT88Q13099 833 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 MCUQ8NE86 351 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 MORC4Q8TE76 937 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
SCN8A-208ENST00000599343 SDCCAG3Q96C92 435 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 PPP1R13BQ96KQ4 1090 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 PAGR1Q9BTK6 254 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 SLC52A2Q9HAB3 445 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 PCDHA7Q9UN72 937 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 OR52Z1P0C646 297 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 IL13P35225 146 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 ETF1P62495 437 aaKnown RBP12.94□□□□□ -0.34
SCN8A-208ENST00000599343 CERS3Q8IU89 383 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 GOLGA5Q8TBA6 731 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 ESYT2A0FGR8 921 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 SPATS2Q86XZ4 545 aaKnown RBP12.94□□□□□ -0.34
SCN8A-208ENST00000599343 HAUS8Q9BT25 410 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 PALD1Q9ULE6 856 aa12.94□□□□□ -0.34
SCN8A-208ENST00000599343 PASKQ96RG2 1323 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 H2AFZP0C0S5 128 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 ALAS1P13196 640 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 MESDQ14696 234 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 H2AFVQ71UI9 128 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 ZNF274Q96GC6 653 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-208ENST00000599343 HAUS4Q9H6D7 363 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 EPN1Q9Y6I3 576 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-208ENST00000599343 ATP5JP18859 108 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 GARSP41250 739 aaKnown RBP12.93□□□□□ -0.34
SCN8A-208ENST00000599343 PIK3CAP42336 1068 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 ZKSCAN8Q15776 578 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-208ENST00000599343 ARMCX5Q6P1M9 558 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 FAM178BQ8IXR5 827 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 TEKT1Q969V4 418 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 IWS1Q96ST2 819 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 H7C1D1 291 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 GTPBP6O43824 516 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-208ENST00000599343 PHEXP78562 749 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 FAM47CQ5HY64 1035 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 TMTC4Q5T4D3 741 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 RFX6Q8HWS3 928 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 SLC35F6Q8N357 371 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 NCAPGQ9BPX3 1015 aa12.93□□□□□ -0.34
SCN8A-208ENST00000599343 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms