RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 ASTN1O14525 1302 aa17.46■□□□□ 0.38
IRF3-223ENST00000599223 ERC2O15083 957 aa17.45■□□□□ 0.38
IRF3-223ENST00000599223 OAZ1P54368 228 aa17.45■□□□□ 0.38
IRF3-223ENST00000599223 CNTN2Q02246 1040 aa17.45■□□□□ 0.38
IRF3-223ENST00000599223 CTDSPL2Q05D32 466 aa17.45■□□□□ 0.38
IRF3-223ENST00000599223 FAAP100Q0VG06 881 aa17.45■□□□□ 0.38
IRF3-223ENST00000599223 ZNF697Q5TEC3 545 aa17.45■□□□□ 0.38
IRF3-223ENST00000599223 VPS53Q5VIR6 699 aa17.45■□□□□ 0.38
IRF3-223ENST00000599223 ARMCX2Q7L311 632 aa17.45■□□□□ 0.38
IRF3-223ENST00000599223 TTYH1Q9H313 450 aaPredicted RBP17.45■□□□□ 0.38
IRF3-223ENST00000599223 STARD7Q9NQZ5 370 aa17.45■□□□□ 0.38
IRF3-223ENST00000599223 IL17RBQ9NRM6 502 aa17.45■□□□□ 0.38
IRF3-223ENST00000599223 FAM184BQ9ULE4 1060 aa17.45■□□□□ 0.38
IRF3-223ENST00000599223 SPTBN5Q9NRC6 3674 aaKnown RBP17.45■□□□□ 0.38
IRF3-223ENST00000599223 TMEM232C9JQI7 657 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 CTAGE5O15320 804 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 DUSP11O75319 330 aaKnown RBP17.44■□□□□ 0.38
IRF3-223ENST00000599223 PTGS1P23219 599 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 CST5P28325 142 aaPredicted RBP17.44■□□□□ 0.38
IRF3-223ENST00000599223 SNAP25P60880 206 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 PDE4BQ07343 736 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 ACVR2BQ13705 512 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 KCNA10Q16322 511 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 CCDC144BQ3MJ40 725 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 ANKRD33Q7Z3H0 272 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 ANKRD35Q8N283 1001 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 FAM133AQ8N9E0 248 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 CHST13Q8NET6 341 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 GMCL1Q96IK5 515 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 AGBL1Q96MI9 1066 aa17.44■□□□□ 0.38
IRF3-223ENST00000599223 TSEN34Q9BSV6 310 aaKnown RBP17.44■□□□□ 0.38
IRF3-223ENST00000599223 A1CFQ9NQ94 594 aaKnown RBP17.44■□□□□ 0.38
IRF3-223ENST00000599223 ISY1Q9ULR0 285 aaKnown RBP17.44■□□□□ 0.38
IRF3-223ENST00000599223 MCCP23508 829 aa17.43■□□□□ 0.38
IRF3-223ENST00000599223 STAT2P52630 851 aa17.43■□□□□ 0.38
IRF3-223ENST00000599223 RRP1P56182 461 aaKnown RBP17.43■□□□□ 0.38
IRF3-223ENST00000599223 LRRFIP1Q32MZ4 808 aaKnown RBP17.43■□□□□ 0.38
IRF3-223ENST00000599223 KCTD1Q719H9 257 aa17.43■□□□□ 0.38
IRF3-223ENST00000599223 CCDC144CPQ8IYA2 1237 aa17.43■□□□□ 0.38
IRF3-223ENST00000599223 UPF3AQ9H1J1 476 aaKnown RBP17.43■□□□□ 0.38
IRF3-223ENST00000599223 RNF146Q9NTX7 359 aa17.43■□□□□ 0.38
IRF3-223ENST00000599223 FBXO40Q9UH90 709 aa17.43■□□□□ 0.38
IRF3-223ENST00000599223 TBX21Q9UL17 535 aa17.43■□□□□ 0.38
IRF3-223ENST00000599223 CTDP1Q9Y5B0 961 aaPredicted RBP17.43■□□□□ 0.38
IRF3-223ENST00000599223 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.42■□□□□ 0.38
IRF3-223ENST00000599223 SOWAHBA6NEL2 793 aa17.42■□□□□ 0.38
IRF3-223ENST00000599223 MOXD2PA6NHM9 499 aa17.42■□□□□ 0.38
IRF3-223ENST00000599223 C6orf222P0C671 652 aaPredicted RBP17.42■□□□□ 0.38
IRF3-223ENST00000599223 RAG1P15918 1043 aa17.42■□□□□ 0.38
IRF3-223ENST00000599223 SLC1A4P43007 532 aa17.42■□□□□ 0.38
IRF3-223ENST00000599223 RNPC3Q96LT9 517 aaKnown RBP17.42■□□□□ 0.38
IRF3-223ENST00000599223 CDX2Q99626 313 aaPredicted RBP17.42■□□□□ 0.38
IRF3-223ENST00000599223 ABHD16BQ9H3Z7 469 aa17.42■□□□□ 0.38
IRF3-223ENST00000599223 ACAD9Q9H845 621 aa17.42■□□□□ 0.38
IRF3-223ENST00000599223 TMEM39AQ9NV64 488 aa17.42■□□□□ 0.38
IRF3-223ENST00000599223 STX8Q9UNK0 236 aa17.42■□□□□ 0.38
IRF3-223ENST00000599223 LAMA4Q16363 1823 aa17.42■□□□□ 0.38
IRF3-223ENST00000599223 ASGR1P07306 291 aa17.41■□□□□ 0.38
IRF3-223ENST00000599223 SLC3A2P08195 630 aaKnown RBP17.41■□□□□ 0.38
IRF3-223ENST00000599223 SMAD3P84022 425 aaKnown RBP17.41■□□□□ 0.38
IRF3-223ENST00000599223 FPGSQ05932 587 aa17.41■□□□□ 0.38
IRF3-223ENST00000599223 MUM1L1Q5H9M0 696 aa17.41■□□□□ 0.38
IRF3-223ENST00000599223 CCDC174Q6PII3 467 aa17.41■□□□□ 0.38
IRF3-223ENST00000599223 NUP133Q8WUM0 1156 aa17.41■□□□□ 0.38
IRF3-223ENST00000599223 STAG1Q8WVM7 1258 aa17.41■□□□□ 0.38
IRF3-223ENST00000599223 TOX2Q96NM4 488 aa17.41■□□□□ 0.38
IRF3-223ENST00000599223 CRBNQ96SW2 442 aa17.41■□□□□ 0.38
IRF3-223ENST00000599223 SEMA6BQ9H3T3 888 aa17.41■□□□□ 0.38
IRF3-223ENST00000599223 CHD9Q3L8U1 2897 aa17.41■□□□□ 0.38
IRF3-223ENST00000599223 GBF1Q92538 1859 aa17.4■□□□□ 0.38
IRF3-223ENST00000599223 A0A0D9SFI3 127 aa17.4■□□□□ 0.38
IRF3-223ENST00000599223 TSPY2A6NKD2 308 aa17.4■□□□□ 0.38
IRF3-223ENST00000599223 NOVP48745 357 aa17.4■□□□□ 0.38
IRF3-223ENST00000599223 GJA9P57773 515 aa17.4■□□□□ 0.38
IRF3-223ENST00000599223 IKQ13123 557 aaPredicted RBP17.4■□□□□ 0.38
IRF3-223ENST00000599223 FAM160B2Q86V87 743 aa17.4■□□□□ 0.38
IRF3-223ENST00000599223 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.4■□□□□ 0.388e-8■■■□□ 16.6
IRF3-223ENST00000599223 FAM227BQ96M60 508 aa17.4■□□□□ 0.38
IRF3-223ENST00000599223 PURBQ96QR8 312 aaKnown RBP17.4■□□□□ 0.38
IRF3-223ENST00000599223 PRR12Q9ULL5 1215 aa17.4■□□□□ 0.38
IRF3-223ENST00000599223 MTMR7Q9Y216 660 aa17.4■□□□□ 0.38
IRF3-223ENST00000599223 ALAS1P13196 640 aa17.39■□□□□ 0.37
IRF3-223ENST00000599223 CDK7P50613 346 aa17.39■□□□□ 0.37
IRF3-223ENST00000599223 BEX3Q00994 111 aa17.39■□□□□ 0.37
IRF3-223ENST00000599223 MYLIPQ8WY64 445 aa17.39■□□□□ 0.37
IRF3-223ENST00000599223 GLT1D1Q96MS3 346 aa17.39■□□□□ 0.37
IRF3-223ENST00000599223 ANAPC4Q9UJX5 808 aa17.39■□□□□ 0.37
IRF3-223ENST00000599223 ELP1O95163 1332 aa17.39■□□□□ 0.37
IRF3-223ENST00000599223 DCDC2CA8MYV0 355 aa17.38■□□□□ 0.37
IRF3-223ENST00000599223 RANBP6O60518 1105 aaKnown RBP17.38■□□□□ 0.37
IRF3-223ENST00000599223 PLA2G6O60733 806 aa17.38■□□□□ 0.37
IRF3-223ENST00000599223 FDX1P10109 184 aa17.38■□□□□ 0.37
IRF3-223ENST00000599223 PDE1AP54750 535 aa17.38■□□□□ 0.37
IRF3-223ENST00000599223 NKX3-2P78367 333 aa17.38■□□□□ 0.37
IRF3-223ENST00000599223 GNASQ5JWF2 1037 aa17.38■□□□□ 0.37
IRF3-223ENST00000599223 TMEM63BQ5T3F8 832 aa17.38■□□□□ 0.37
IRF3-223ENST00000599223 ANKRD45Q5TZF3 282 aa17.38■□□□□ 0.37
IRF3-223ENST00000599223 ZNF589Q86UQ0 364 aaPredicted RBP17.38■□□□□ 0.37
IRF3-223ENST00000599223 FAM126BQ8IXS8 530 aa17.38■□□□□ 0.37
IRF3-223ENST00000599223 CHURC1Q8WUH1 139 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms