RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 GDF11O95390 407 aa19.4■□□□□ 0.7
SHKBP1-216ENST00000598201 RPS12P25398 132 aaKnown RBP19.4■□□□□ 0.7
SHKBP1-216ENST00000598201 SLC16A2P36021 539 aa19.4■□□□□ 0.7
SHKBP1-216ENST00000598201 GMPSP49915 693 aaPredicted RBP19.4■□□□□ 0.7
SHKBP1-216ENST00000598201 RRP1BQ14684 758 aaKnown RBP19.4■□□□□ 0.7
SHKBP1-216ENST00000598201 SARM1Q6SZW1 724 aa19.4■□□□□ 0.7
SHKBP1-216ENST00000598201 COA7Q96BR5 231 aa19.4■□□□□ 0.7
SHKBP1-216ENST00000598201 C6orf50Q9HD87 102 aa19.4■□□□□ 0.7
SHKBP1-216ENST00000598201 BMP6P22004 513 aa19.39■□□□□ 0.69
SHKBP1-216ENST00000598201 CCDC96Q2M329 555 aa19.39■□□□□ 0.69
SHKBP1-216ENST00000598201 DPF2Q92785 391 aa19.39■□□□□ 0.69
SHKBP1-216ENST00000598201 MKL1Q969V6 931 aa19.39■□□□□ 0.69
SHKBP1-216ENST00000598201 TTC12Q9H892 705 aaPredicted RBP19.39■□□□□ 0.69
SHKBP1-216ENST00000598201 KANSL2Q9H9L4 492 aa19.39■□□□□ 0.69
SHKBP1-216ENST00000598201 PPP1R11O60927 126 aaPredicted RBP19.39■□□□□ 0.69
SHKBP1-216ENST00000598201 GNA11P29992 359 aa19.39■□□□□ 0.69
SHKBP1-216ENST00000598201 CSRNP1Q96S65 589 aa19.39■□□□□ 0.69
SHKBP1-216ENST00000598201 TMEM60Q9H2L4 133 aa19.39■□□□□ 0.69
SHKBP1-216ENST00000598201 NYAP2Q9P242 653 aa19.39■□□□□ 0.69
SHKBP1-216ENST00000598201 SARSP49591 514 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-216ENST00000598201 NCAPHQ15003 741 aa19.38■□□□□ 0.69
SHKBP1-216ENST00000598201 DLGAP5Q15398 846 aa19.38■□□□□ 0.69
SHKBP1-216ENST00000598201 GPATCH4Q5T3I0 446 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-216ENST00000598201 ARL6IP4Q66PJ3 421 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-216ENST00000598201 ZNF70Q9UC06 446 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-216ENST00000598201 HOOK1Q9UJC3 728 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-216ENST00000598201 MAN1B1Q9UKM7 699 aa19.38■□□□□ 0.69
SHKBP1-216ENST00000598201 ESYT2A0FGR8 921 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 ABCB5Q2M3G0 1257 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 PPP4R3BQ5MIZ7 849 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 NT5DC1Q5TFE4 455 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 TMEM179Q6ZVK1 233 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 KRT25Q7Z3Z0 450 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 TMEM260Q9NX78 707 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 BIN2Q9UBW5 565 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 COL2A1P02458 1487 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 PNMA6FA0A0J9YX94 578 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 USP17L10C9JJH3 530 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 SLFN14P0C7P3 912 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 ICA1Q05084 483 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 OGFOD1Q8N543 542 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 L3MBTL3Q96JM7 780 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 CNOT7Q9UIV1 285 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 HDAC9Q9UKV0 1011 aa19.37■□□□□ 0.69
SHKBP1-216ENST00000598201 hCG_1984214I3L0E3 225 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 RAD21O60216 631 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 NONOQ15233 471 aaKnown RBP eCLIP19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 JAKMIP3Q5VZ66 844 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 KANK3Q6NY19 840 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 SH3RF1Q7Z6J0 888 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 ZNF713Q8N859 430 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 PAGE5Q96GU1 130 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 GPRC5DQ9NZD1 345 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 TMOD2Q9NZR1 351 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 GH2P01242 217 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 CDC25AP30304 524 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 AFMP43652 599 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 E2F4Q16254 413 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 SLFN13Q68D06 897 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 REXO1Q8N1G1 1221 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 SPATA20Q8TB22 786 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 ZNF526Q8TF50 670 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 SMARCE1Q969G3 411 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 MTMR8Q96EF0 704 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 NRBP1Q9UHY1 535 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 CNTNAP1P78357 1384 aa19.36■□□□□ 0.69
SHKBP1-216ENST00000598201 CASP1P29466 404 aa19.35■□□□□ 0.69
SHKBP1-216ENST00000598201 LMOD1P29536 600 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-216ENST00000598201 SPDYE2Q495Y8 402 aa19.35■□□□□ 0.69
SHKBP1-216ENST00000598201 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-216ENST00000598201 MICALL2Q8IY33 904 aa19.35■□□□□ 0.69
SHKBP1-216ENST00000598201 HSD3B7Q9H2F3 369 aa19.35■□□□□ 0.69
SHKBP1-216ENST00000598201 KCNF1Q9H3M0 494 aa19.35■□□□□ 0.69
SHKBP1-216ENST00000598201 SHTN1A0MZ66 631 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 ZNF500O60304 480 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 LONP1P36776 959 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 EPS15P42566 896 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 SLC1A4P43007 532 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 LETM2Q2VYF4 491 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 CDAN1Q8IWY9 1227 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 DRC7Q8IY82 874 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 TBCKQ8TEA7 893 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 H7C1D1 291 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 ZBTB5O15062 677 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 PTGS1P23219 599 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 ADCY7P51828 1080 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 MORC3Q14149 939 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 RBM26Q5T8P6 1007 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 DCAF4Q8WV16 495 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 FAM151AQ8WW52 585 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 MRFAP1L1Q96HT8 127 aa19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.34■□□□□ 0.69
SHKBP1-216ENST00000598201 IKBKBO14920 756 aa19.33■□□□□ 0.69
SHKBP1-216ENST00000598201 CCNT1O60563 726 aaKnown RBP19.33■□□□□ 0.69
SHKBP1-216ENST00000598201 YY1P25490 414 aa19.33■□□□□ 0.69
SHKBP1-216ENST00000598201 CDC25BP30305 580 aa19.33■□□□□ 0.69
SHKBP1-216ENST00000598201 MMP14P50281 582 aa19.33■□□□□ 0.69
SHKBP1-216ENST00000598201 DTHD1Q6ZMT9 781 aa19.33■□□□□ 0.69
SHKBP1-216ENST00000598201 NEK8Q86SG6 692 aa19.33■□□□□ 0.69
SHKBP1-216ENST00000598201 NUP88Q99567 741 aaPredicted RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms