RNA–Protein interactions for RNA: ENST00000597687.1

SH2D3A-207, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 859 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-207ENST00000597687 TIMP1P01033 207 aa17.41■□□□□ 0.38
SH2D3A-207ENST00000597687 BMP3P12645 472 aa17.41■□□□□ 0.38
SH2D3A-207ENST00000597687 KCNA10Q16322 511 aa17.41■□□□□ 0.38
SH2D3A-207ENST00000597687 ARMCX2Q7L311 632 aa17.41■□□□□ 0.38
SH2D3A-207ENST00000597687 LRRC47Q8N1G4 583 aaKnown RBP17.41■□□□□ 0.38
SH2D3A-207ENST00000597687 CEP95Q96GE4 821 aa17.41■□□□□ 0.38
SH2D3A-207ENST00000597687 GAS2L1Q99501 681 aaPredicted RBP17.41■□□□□ 0.38
SH2D3A-207ENST00000597687 FSD1Q9BTV5 496 aa17.41■□□□□ 0.38
SH2D3A-207ENST00000597687 SLC38A10Q9HBR0 1119 aa17.41■□□□□ 0.38
SH2D3A-207ENST00000597687 RAVER2Q9HCJ3 691 aaKnown RBP17.41■□□□□ 0.38
SH2D3A-207ENST00000597687 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
SH2D3A-207ENST00000597687 ASB14A6NK59 587 aa17.4■□□□□ 0.38
SH2D3A-207ENST00000597687 DNAJB2P25686 324 aa17.4■□□□□ 0.38
SH2D3A-207ENST00000597687 SLC1A4P43007 532 aa17.4■□□□□ 0.38
SH2D3A-207ENST00000597687 TKFCQ3LXA3 575 aa17.4■□□□□ 0.38
SH2D3A-207ENST00000597687 GNASQ5JWF2 1037 aa17.4■□□□□ 0.38
SH2D3A-207ENST00000597687 SLFN13Q68D06 897 aa17.4■□□□□ 0.38
SH2D3A-207ENST00000597687 SEZ6LQ9BYH1 1024 aa17.4■□□□□ 0.38
SH2D3A-207ENST00000597687 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
SH2D3A-207ENST00000597687 TTC41PQ6P2S7 1318 aa17.4■□□□□ 0.38
SH2D3A-207ENST00000597687 DNAJC25-GNG10A0A024R161 153 aa17.39■□□□□ 0.37
SH2D3A-207ENST00000597687 PRDM1O75626 825 aa17.39■□□□□ 0.37
SH2D3A-207ENST00000597687 CABYRO75952 493 aa17.39■□□□□ 0.37
SH2D3A-207ENST00000597687 ASGR1P07306 291 aa17.39■□□□□ 0.37
SH2D3A-207ENST00000597687 CCDC144BQ3MJ40 725 aa17.39■□□□□ 0.37
SH2D3A-207ENST00000597687 MFSD5Q6N075 450 aa17.39■□□□□ 0.37
SH2D3A-207ENST00000597687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.39■□□□□ 0.37
SH2D3A-207ENST00000597687 IL27Q8NEV9 243 aa17.39■□□□□ 0.37
SH2D3A-207ENST00000597687 TIFAQ96CG3 184 aa17.39■□□□□ 0.37
SH2D3A-207ENST00000597687 AP5M1Q9H0R1 490 aa17.39■□□□□ 0.37
SH2D3A-207ENST00000597687 PATL2C9JE40 543 aaKnown RBP17.38■□□□□ 0.37
SH2D3A-207ENST00000597687 TMEM232C9JQI7 657 aa17.38■□□□□ 0.37
SH2D3A-207ENST00000597687 SNAI1O95863 264 aaPredicted RBP17.38■□□□□ 0.37
SH2D3A-207ENST00000597687 FAAP100Q0VG06 881 aa17.38■□□□□ 0.37
SH2D3A-207ENST00000597687 KLHDC9Q8NEP7 349 aa17.38■□□□□ 0.37
SH2D3A-207ENST00000597687 OSBP2Q969R2 916 aa17.38■□□□□ 0.37
SH2D3A-207ENST00000597687 MKL1Q969V6 931 aa17.38■□□□□ 0.37
SH2D3A-207ENST00000597687 MPHOSPH6Q99547 160 aaKnown RBP17.38■□□□□ 0.37
SH2D3A-207ENST00000597687 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.38■□□□□ 0.37
SH2D3A-207ENST00000597687 RNF146Q9NTX7 359 aa17.38■□□□□ 0.37
SH2D3A-207ENST00000597687 STX8Q9UNK0 236 aa17.38■□□□□ 0.37
SH2D3A-207ENST00000597687 TSPY2A6NKD2 308 aa17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 SMIM22K7EJ46 135 aa17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 ARVCFO00192 962 aa17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 CHGBP05060 677 aa17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 GJA9P57773 515 aa17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 TNFAIP2Q03169 654 aa17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 RAB30Q15771 203 aa17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 CCDC144CPQ8IYA2 1237 aa17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 IFNL3Q8IZI9 196 aa17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 UPF3AQ9H1J1 476 aaKnown RBP17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 TTYH1Q9H313 450 aaPredicted RBP17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 MSRAQ9UJ68 235 aa17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 RIPK3Q9Y572 518 aa17.37■□□□□ 0.37
SH2D3A-207ENST00000597687 TFAP4Q01664 338 aa17.36■□□□□ 0.37
SH2D3A-207ENST00000597687 PPARAQ07869 468 aa17.36■□□□□ 0.37
SH2D3A-207ENST00000597687 TLK2Q86UE8 772 aa17.36■□□□□ 0.37
SH2D3A-207ENST00000597687 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
SH2D3A-207ENST00000597687 GMCL1Q96IK5 515 aa17.36■□□□□ 0.37
SH2D3A-207ENST00000597687 ZNF576Q9H609 170 aa17.36■□□□□ 0.37
SH2D3A-207ENST00000597687 EPB41L4AQ9HCS5 686 aaPredicted RBP17.36■□□□□ 0.37
SH2D3A-207ENST00000597687 TBX21Q9UL17 535 aa17.36■□□□□ 0.37
SH2D3A-207ENST00000597687 MYO9BQ13459 2157 aa17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 IGKV6D-41A0A0C4DH26 115 aa17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 M0R2C6 588 aa17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 ALAS1P13196 640 aa17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 ITGB8P26012 769 aa17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 CCDC96Q2M329 555 aa17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 BRDTQ58F21 947 aaPredicted RBP17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 STAG1Q8WVM7 1258 aa17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 PPP1R12CQ9BZL4 782 aa17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 DCTPP1Q9H773 170 aa17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 PNMA2Q9UL42 364 aa17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 RAD50Q92878 1312 aa17.35■□□□□ 0.37
SH2D3A-207ENST00000597687 FSCN1Q16658 493 aaKnown RBP17.34■□□□□ 0.37
SH2D3A-207ENST00000597687 TSHZ3Q63HK5 1081 aa17.34■□□□□ 0.37
SH2D3A-207ENST00000597687 TTC28Q96AY4 2481 aa17.34■□□□□ 0.37
SH2D3A-207ENST00000597687 TRERF1Q96PN7 1200 aa17.34■□□□□ 0.37
SH2D3A-207ENST00000597687 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.34■□□□□ 0.37
SH2D3A-207ENST00000597687 TSPYL2Q9H2G4 693 aaPredicted RBP17.34■□□□□ 0.37
SH2D3A-207ENST00000597687 TOMM22Q9NS69 142 aa17.34■□□□□ 0.37
SH2D3A-207ENST00000597687 ADD3Q9UEY8 706 aaKnown RBP17.34■□□□□ 0.37
SH2D3A-207ENST00000597687 CCPG1Q9ULG6 757 aa17.34■□□□□ 0.37
SH2D3A-207ENST00000597687 MYADML2A6NDP7 307 aa17.33■□□□□ 0.36
SH2D3A-207ENST00000597687 TJAP1Q5JTD0 557 aa17.33■□□□□ 0.36
SH2D3A-207ENST00000597687 HIPK3Q9H422 1215 aa17.33■□□□□ 0.36
SH2D3A-207ENST00000597687 A1CFQ9NQ94 594 aaKnown RBP17.33■□□□□ 0.36
SH2D3A-207ENST00000597687 CDH23Q9H251 3354 aa17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 RANBP6O60518 1105 aaKnown RBP17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 PLA2G6O60733 806 aa17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 CSF2RAP15509 400 aa17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 EPHB4P54760 987 aa17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 CCSAPQ6IQ19 270 aaPredicted RBP17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 NSMFQ6X4W1 530 aa17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 FAM126BQ8IXS8 530 aa17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 RPUSD2Q8IZ73 545 aaKnown RBP17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 VTA1Q9NP79 307 aa17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 IL23AQ9NPF7 189 aa17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 GPHNQ9NQX3 736 aaPredicted RBP17.32■□□□□ 0.36
SH2D3A-207ENST00000597687 LRRC37A2A6NM11 1700 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms