RNA–Protein interactions for RNA: ENST00000597651.5

SOX2-OT-227, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 629 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-227ENST00000597651 NOVP48745 357 aa16.1■□□□□ 0.17
SOX2-OT-227ENST00000597651 TRIM60Q495X7 471 aa16.1■□□□□ 0.17
SOX2-OT-227ENST00000597651 AKNAD1Q5T1N1 836 aa16.1■□□□□ 0.17
SOX2-OT-227ENST00000597651 SLFN13Q68D06 897 aa16.1■□□□□ 0.17
SOX2-OT-227ENST00000597651 SH3RF1Q7Z6J0 888 aa16.1■□□□□ 0.17
SOX2-OT-227ENST00000597651 ARRDC4Q8NCT1 418 aa16.1■□□□□ 0.17
SOX2-OT-227ENST00000597651 SYNPO2Q9UMS6 1093 aa16.1■□□□□ 0.17
SOX2-OT-227ENST00000597651 A0A0C4DFX4 3053 aa16.1■□□□□ 0.17
SOX2-OT-227ENST00000597651 TRIM43BA6NCK2 446 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 MYADML2A6NDP7 307 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 TSPY2A6NKD2 308 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 ZNF213O14771 459 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 BMP3P12645 472 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 ITGB8P26012 769 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 RRP12Q5JTH9 1297 aaKnown RBP16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 MAMDC4Q6UXC1 1216 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 TRIM43Q96BQ3 446 aaPredicted RBP16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 ESYT1Q9BSJ8 1104 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 NRBP1Q9UHY1 535 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 CTNNA3Q9UI47 895 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 ATP11BQ9Y2G3 1177 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 ASTN1O14525 1302 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 NEDD4P46934 1319 aa16.09■□□□□ 0.17
SOX2-OT-227ENST00000597651 TMEM232C9JQI7 657 aa16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 MYCNP04198 464 aaPredicted RBP16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 SLC4A3P48751 1232 aa16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 SNAP25P60880 206 aa16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 IMMTQ16891 758 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 CCSAPQ6IQ19 270 aaPredicted RBP16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 KATNBL1Q9H079 304 aa16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 XPNPEP3Q9NQH7 507 aa16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 PDLIM7Q9NR12 457 aa16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
SOX2-OT-227ENST00000597651 KBTBD13C9JR72 458 aa16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 ZBED4O75132 1171 aa16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 CDC45O75419 566 aa16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 PCP11498 1178 aaKnown RBP16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 MCCP23508 829 aa16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 COPB2P35606 906 aa16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 CNTN2Q02246 1040 aa16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 C1orf53Q5VUE5 145 aa16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 KCTD1Q719H9 257 aa16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 GMCL1Q96IK5 515 aa16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 AGBL1Q96MI9 1066 aa16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 LSG1Q9H089 658 aaKnown RBP16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 UNC80Q8N2C7 3258 aa16.07■□□□□ 0.16
SOX2-OT-227ENST00000597651 LRRC37A2A6NM11 1700 aa16.06■□□□□ 0.16
SOX2-OT-227ENST00000597651 SYNGAP1Q96PV0 1343 aa16.06■□□□□ 0.16
SOX2-OT-227ENST00000597651 SYNRGQ9UMZ2 1314 aa16.06■□□□□ 0.16
SOX2-OT-227ENST00000597651 RARBP10826 455 aa16.06■□□□□ 0.16
SOX2-OT-227ENST00000597651 PTGS1P23219 599 aa16.06■□□□□ 0.16
SOX2-OT-227ENST00000597651 C9orf50Q5SZB4 431 aa16.06■□□□□ 0.16
SOX2-OT-227ENST00000597651 KLHDC9Q8NEP7 349 aa16.06■□□□□ 0.16
SOX2-OT-227ENST00000597651 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
SOX2-OT-227ENST00000597651 DDX11Q96FC9 970 aa16.06■□□□□ 0.16
SOX2-OT-227ENST00000597651 TAF6LQ9Y6J9 622 aa16.06■□□□□ 0.16
SOX2-OT-227ENST00000597651 U3KPZ7 1027 aaPredicted RBP16.06■□□□□ 0.16
SOX2-OT-227ENST00000597651 A0A1W2PQ45 241 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 A0A1W2PQY0 241 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 SOWAHBA6NEL2 793 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 CTAGE5O15320 804 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 CYP21A2P08686 494 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 AKR1A1P14550 325 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 OAZ1P54368 228 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 TLE2Q04725 743 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 MUM1L1Q5H9M0 696 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 TTBK2Q6IQ55 1244 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 GPR153Q6NV75 609 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 ZNF467Q7Z7K2 595 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 MSL3Q8N5Y2 521 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 FAM133AQ8N9E0 248 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 A1CFQ9NQ94 594 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 HOMER2Q9NSB8 354 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 RBM8AQ9Y5S9 174 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 LAMA4Q16363 1823 aa16.05■□□□□ 0.16
SOX2-OT-227ENST00000597651 SLC1A4P43007 532 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 STAT2P52630 851 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 EPHB4P54760 987 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 SHHQ15465 462 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 TMEM63BQ5T3F8 832 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 RCSD1Q6JBY9 416 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 ARMCX2Q7L311 632 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 DEFB123Q8N688 67 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 CHST13Q8NET6 341 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 ESR2Q92731 530 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 BADQ92934 168 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 PURBQ96QR8 312 aaKnown RBP16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 TCP11L1Q9NUJ3 509 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 MTMR10Q9NXD2 777 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 PRR12Q9ULL5 1215 aa16.04■□□□□ 0.16
SOX2-OT-227ENST00000597651 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms