RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 DDX11Q96FC9 970 aa18.72■□□□□ 0.59
LIG1-214ENST00000597146 SNX27Q96L92 541 aa18.72■□□□□ 0.59
LIG1-214ENST00000597146 CRNKL1Q9BZJ0 848 aaKnown RBP18.72■□□□□ 0.59
LIG1-214ENST00000597146 EEF2P13639 858 aaKnown RBP18.71■□□□□ 0.59
LIG1-214ENST00000597146 TTLL4Q14679 1199 aa18.71■□□□□ 0.59
LIG1-214ENST00000597146 SLC43A3Q8NBI5 491 aa18.71■□□□□ 0.59
LIG1-214ENST00000597146 ARNTL2Q8WYA1 636 aa18.71■□□□□ 0.59
LIG1-214ENST00000597146 HLA-CQ95604 372 aa18.71■□□□□ 0.59
LIG1-214ENST00000597146 TRPV6Q9H1D0 765 aa18.71■□□□□ 0.59
LIG1-214ENST00000597146 DCP1AQ9NPI6 582 aaPredicted RBP18.71■□□□□ 0.59
LIG1-214ENST00000597146 ASTN1O14525 1302 aa18.71■□□□□ 0.59
LIG1-214ENST00000597146 GRIN2DO15399 1336 aa18.71■□□□□ 0.59
LIG1-214ENST00000597146 PI4K2BG5E9Z4 385 aa18.7■□□□□ 0.58
LIG1-214ENST00000597146 B4GALT4O60513 344 aa18.7■□□□□ 0.58
LIG1-214ENST00000597146 PTGS1P23219 599 aa18.7■□□□□ 0.58
LIG1-214ENST00000597146 SLC4A3P48751 1232 aa18.7■□□□□ 0.58
LIG1-214ENST00000597146 POLA2Q14181 598 aa18.7■□□□□ 0.58
LIG1-214ENST00000597146 TMEM67Q5HYA8 995 aa18.7■□□□□ 0.58
LIG1-214ENST00000597146 ARMCX2Q7L311 632 aa18.7■□□□□ 0.58
LIG1-214ENST00000597146 EAF2Q96CJ1 260 aaPredicted RBP18.7■□□□□ 0.58
LIG1-214ENST00000597146 NUP88Q99567 741 aaPredicted RBP18.7■□□□□ 0.58
LIG1-214ENST00000597146 TEX13BQ9BXU2 312 aa18.7■□□□□ 0.58
LIG1-214ENST00000597146 ABHD16BQ9H3Z7 469 aa18.7■□□□□ 0.58
LIG1-214ENST00000597146 SWAP70Q9UH65 585 aa18.7■□□□□ 0.58
LIG1-214ENST00000597146 MYH4Q9Y623 1939 aa18.7■□□□□ 0.58
LIG1-214ENST00000597146 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.69■□□□□ 0.58
LIG1-214ENST00000597146 SURF6O75683 361 aaKnown RBP18.69■□□□□ 0.58
LIG1-214ENST00000597146 RARSP54136 660 aaKnown RBP18.69■□□□□ 0.58
LIG1-214ENST00000597146 ITGA7Q13683 1181 aa18.69■□□□□ 0.58
LIG1-214ENST00000597146 SPRED2Q7Z698 418 aa18.69■□□□□ 0.58
LIG1-214ENST00000597146 ZNF467Q7Z7K2 595 aaPredicted RBP18.69■□□□□ 0.58
LIG1-214ENST00000597146 LCORLQ8N3X6 602 aa18.69■□□□□ 0.58
LIG1-214ENST00000597146 FRAT1Q92837 279 aaPredicted RBP18.69■□□□□ 0.58
LIG1-214ENST00000597146 KATNBL1Q9H079 304 aa18.69■□□□□ 0.58
LIG1-214ENST00000597146 CYP2D7A0A087X1C5 515 aa18.68■□□□□ 0.58
LIG1-214ENST00000597146 PRR33A8MZF0 331 aa18.68■□□□□ 0.58
LIG1-214ENST00000597146 PSMC6P62333 389 aa18.68■□□□□ 0.58
LIG1-214ENST00000597146 RPUSD2Q8IZ73 545 aaKnown RBP18.68■□□□□ 0.58
LIG1-214ENST00000597146 AGBL1Q96MI9 1066 aa18.68■□□□□ 0.58
LIG1-214ENST00000597146 TET1Q8NFU7 2136 aa18.67■□□□□ 0.58
LIG1-214ENST00000597146 BCAR3O75815 825 aa18.67■□□□□ 0.58
LIG1-214ENST00000597146 PDE6AP16499 860 aa18.67■□□□□ 0.58
LIG1-214ENST00000597146 NKX3-2P78367 333 aa18.67■□□□□ 0.58
LIG1-214ENST00000597146 TAP1Q03518 808 aa18.67■□□□□ 0.58
LIG1-214ENST00000597146 GRB10Q13322 594 aa18.67■□□□□ 0.58
LIG1-214ENST00000597146 DEFB128Q7Z7B8 93 aa18.67■□□□□ 0.58
LIG1-214ENST00000597146 SSH3Q8TE77 659 aa18.67■□□□□ 0.58
LIG1-214ENST00000597146 ARHGAP45Q92619 1136 aa18.67■□□□□ 0.58
LIG1-214ENST00000597146 SLF1Q9BQI6 1058 aa18.67■□□□□ 0.58
LIG1-214ENST00000597146 GOPCQ9HD26 462 aa18.67■□□□□ 0.58
LIG1-214ENST00000597146 CDK8P49336 464 aa18.66■□□□□ 0.58
LIG1-214ENST00000597146 TMED8Q6PL24 325 aaPredicted RBP18.66■□□□□ 0.58
LIG1-214ENST00000597146 NOL8Q76FK4 1167 aaKnown RBP18.66■□□□□ 0.58
LIG1-214ENST00000597146 TLK2Q86UE8 772 aa18.66■□□□□ 0.58
LIG1-214ENST00000597146 CCDC144CPQ8IYA2 1237 aa18.66■□□□□ 0.58
LIG1-214ENST00000597146 CPXCR1Q8N123 301 aa18.66■□□□□ 0.58
LIG1-214ENST00000597146 ZNF532Q9HCE3 1301 aa18.66■□□□□ 0.58
LIG1-214ENST00000597146 LCTP09848 1927 aa18.66■□□□□ 0.58
LIG1-214ENST00000597146 MYH7P12883 1935 aa18.65■□□□□ 0.58
LIG1-214ENST00000597146 PRKAB2O43741 272 aa18.65■□□□□ 0.58
LIG1-214ENST00000597146 LPXNO60711 386 aa18.65■□□□□ 0.58
LIG1-214ENST00000597146 TRIM27P14373 513 aa18.65■□□□□ 0.58
LIG1-214ENST00000597146 FSCN1Q16658 493 aaKnown RBP18.65■□□□□ 0.58
LIG1-214ENST00000597146 SLC9C2Q5TAH2 1124 aa18.65■□□□□ 0.58
LIG1-214ENST00000597146 UIMC1Q96RL1 719 aa18.65■□□□□ 0.58
LIG1-214ENST00000597146 C1orf115Q9H7X2 142 aa18.65■□□□□ 0.58
LIG1-214ENST00000597146 ARMT1Q9H993 441 aa18.65■□□□□ 0.58
LIG1-214ENST00000597146 DDX49Q9Y6V7 483 aaKnown RBP18.65■□□□□ 0.58
LIG1-214ENST00000597146 ZNF318Q5VUA4 2279 aa18.65■□□□□ 0.58
LIG1-214ENST00000597146 CABYRO75952 493 aa18.64■□□□□ 0.57
LIG1-214ENST00000597146 CYP2C9P11712 490 aa18.64■□□□□ 0.57
LIG1-214ENST00000597146 NHLH1Q02575 133 aa18.64■□□□□ 0.57
LIG1-214ENST00000597146 TNFAIP2Q03169 654 aa18.64■□□□□ 0.57
LIG1-214ENST00000597146 ANKRD35Q8N283 1001 aa18.64■□□□□ 0.57
LIG1-214ENST00000597146 CLUAP1Q96AJ1 413 aa18.64■□□□□ 0.57
LIG1-214ENST00000597146 CCDC17Q96LX7 622 aa18.64■□□□□ 0.57
LIG1-214ENST00000597146 RAVER2Q9HCJ3 691 aaKnown RBP18.64■□□□□ 0.57
LIG1-214ENST00000597146 GNEQ9Y223 722 aaKnown RBP18.64■□□□□ 0.57
LIG1-214ENST00000597146 SIP14410 1827 aa18.63■□□□□ 0.57
LIG1-214ENST00000597146 TCRBV5S4A2TA0A5A2 114 aa18.63■□□□□ 0.57
LIG1-214ENST00000597146 CNTN2Q02246 1040 aa18.63■□□□□ 0.57
LIG1-214ENST00000597146 GDPD5Q8WTR4 605 aa18.63■□□□□ 0.57
LIG1-214ENST00000597146 SLC9A7Q96T83 725 aa18.63■□□□□ 0.57
LIG1-214ENST00000597146 KANSL2Q9H9L4 492 aa18.63■□□□□ 0.57
LIG1-214ENST00000597146 TRMT13Q9NUP7 481 aaKnown RBP18.63■□□□□ 0.57
LIG1-214ENST00000597146 PFKMP08237 780 aa18.62■□□□□ 0.57
LIG1-214ENST00000597146 SLFNL1Q499Z3 407 aa18.62■□□□□ 0.57
LIG1-214ENST00000597146 C16orf86Q6ZW13 317 aa18.62■□□□□ 0.57
LIG1-214ENST00000597146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.62■□□□□ 0.57
LIG1-214ENST00000597146 ALDH8A1Q9H2A2 487 aaPredicted RBP18.62■□□□□ 0.57
LIG1-214ENST00000597146 TRIP12Q14669 1992 aaPredicted RBP18.61■□□□□ 0.57
LIG1-214ENST00000597146 SMPD1P17405 629 aa18.61■□□□□ 0.57
LIG1-214ENST00000597146 ATP8B2P98198 1209 aa18.61■□□□□ 0.57
LIG1-214ENST00000597146 TMEM63BQ5T3F8 832 aa18.61■□□□□ 0.57
LIG1-214ENST00000597146 C12orf60Q5U649 245 aa18.61■□□□□ 0.57
LIG1-214ENST00000597146 AACSQ86V21 672 aa18.61■□□□□ 0.57
LIG1-214ENST00000597146 HERC6Q8IVU3 1022 aa18.61■□□□□ 0.57
LIG1-214ENST00000597146 GJD3Q8N144 294 aa18.61■□□□□ 0.57
LIG1-214ENST00000597146 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.61■□□□□ 0.57
LIG1-214ENST00000597146 HOMER2Q9NSB8 354 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms