RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 RANBP17Q9H2T7 1088 aaKnown RBP15.34■□□□□ 0.05
USE1-207ENST00000596136 SEPT4O43236 478 aa15.33■□□□□ 0.04
USE1-207ENST00000596136 CCDC96Q2M329 555 aa15.33■□□□□ 0.04
USE1-207ENST00000596136 GPATCH4Q5T3I0 446 aaKnown RBP15.33■□□□□ 0.04
USE1-207ENST00000596136 SYDE2Q5VT97 1194 aa15.33■□□□□ 0.04
USE1-207ENST00000596136 CHMP4CQ96CF2 233 aa15.33■□□□□ 0.04
USE1-207ENST00000596136 DDX11Q96FC9 970 aa15.33■□□□□ 0.04
USE1-207ENST00000596136 ACAD9Q9H845 621 aa15.33■□□□□ 0.04
USE1-207ENST00000596136 ISY1Q9ULR0 285 aaKnown RBP15.33■□□□□ 0.04
USE1-207ENST00000596136 ICAM1P05362 532 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 SLC16A2P36021 539 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 SEC23AQ15436 765 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 PRAMEF19Q5SWL8 479 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 ANKRD35Q8N283 1001 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 PNMA1Q8ND90 353 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 DPF3Q92784 378 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 FGD4Q96M96 766 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 RNF146Q9NTX7 359 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 MTMR7Q9Y216 660 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 ALPK3Q96L96 1907 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 TNKSO95271 1327 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 SYNGAP1Q96PV0 1343 aa15.32■□□□□ 0.04
USE1-207ENST00000596136 DNAH12Q6ZR08 3092 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 ZNF865P0CJ78 1059 aaPredicted RBP15.31■□□□□ 0.04
USE1-207ENST00000596136 CNGA1P29973 690 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 SNAP25P60880 206 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 CYB5R4Q7L1T6 521 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 SKAP1Q86WV1 359 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 FAM133AQ8N9E0 248 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 TRERF1Q96PN7 1200 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 ESYT1Q9BSJ8 1104 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 LSG1Q9H089 658 aaKnown RBP15.31■□□□□ 0.04
USE1-207ENST00000596136 C11orf49Q9H6J7 331 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 GPCPD1Q9NPB8 672 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 A1CFQ9NQ94 594 aaKnown RBP15.31■□□□□ 0.04
USE1-207ENST00000596136 PNMA2Q9UL42 364 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 PFASO15067 1338 aa15.31■□□□□ 0.04
USE1-207ENST00000596136 FRMPD2Q68DX3 1309 aaPredicted RBP15.31■□□□□ 0.04
USE1-207ENST00000596136 E7EWF7 191 aa15.3■□□□□ 0.04
USE1-207ENST00000596136 H0YGN5 161 aa15.3■□□□□ 0.04
USE1-207ENST00000596136 SNAI1O95863 264 aaPredicted RBP15.3■□□□□ 0.04
USE1-207ENST00000596136 ALAS1P13196 640 aa15.3■□□□□ 0.04
USE1-207ENST00000596136 SLC4A3P48751 1232 aa15.3■□□□□ 0.04
USE1-207ENST00000596136 TRDNQ13061 729 aa15.3■□□□□ 0.04
USE1-207ENST00000596136 CCDC174Q6PII3 467 aa15.3■□□□□ 0.04
USE1-207ENST00000596136 UBAC1Q9BSL1 405 aa15.3■□□□□ 0.04
USE1-207ENST00000596136 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
USE1-207ENST00000596136 HOMER2Q9NSB8 354 aa15.3■□□□□ 0.04
USE1-207ENST00000596136 TAF6LQ9Y6J9 622 aa15.3■□□□□ 0.04
USE1-207ENST00000596136 MCM3APO60318 1980 aa15.29■□□□□ 0.04
USE1-207ENST00000596136 WDR19Q8NEZ3 1342 aa15.29■□□□□ 0.04
USE1-207ENST00000596136 TAL1P17542 331 aaPredicted RBP15.29■□□□□ 0.04
USE1-207ENST00000596136 ASPRV1Q53RT3 343 aa15.29■□□□□ 0.04
USE1-207ENST00000596136 MUM1L1Q5H9M0 696 aa15.29■□□□□ 0.04
USE1-207ENST00000596136 STOX1Q6ZVD7 989 aa15.29■□□□□ 0.04
USE1-207ENST00000596136 ARRDC4Q8NCT1 418 aa15.29■□□□□ 0.04
USE1-207ENST00000596136 CCDC136Q96JN2 1154 aa15.29■□□□□ 0.04
USE1-207ENST00000596136 CCPG1Q9ULG6 757 aa15.29■□□□□ 0.04
USE1-207ENST00000596136 RBM8AQ9Y5S9 174 aaKnown RBP15.29■□□□□ 0.04
USE1-207ENST00000596136 NR2E3Q9Y5X4 410 aa15.29■□□□□ 0.04
USE1-207ENST00000596136 POTEB2H3BUK9 544 aa15.28■□□□□ 0.04
USE1-207ENST00000596136 DNM1LO00429 736 aa15.28■□□□□ 0.04
USE1-207ENST00000596136 EVI5O60447 810 aa15.28■□□□□ 0.04
USE1-207ENST00000596136 CNTN2Q02246 1040 aa15.28■□□□□ 0.04
USE1-207ENST00000596136 IFIT1BQ5T764 474 aaKnown RBP15.28■□□□□ 0.04
USE1-207ENST00000596136 KIAA1211Q6ZU35 1233 aa15.28■□□□□ 0.04
USE1-207ENST00000596136 NCOA7Q8NI08 942 aa15.28■□□□□ 0.04
USE1-207ENST00000596136 CYP39A1Q9NYL5 469 aa15.28■□□□□ 0.04
USE1-207ENST00000596136 CNPY2Q9Y2B0 182 aa15.28■□□□□ 0.04
USE1-207ENST00000596136 SOWAHBA6NEL2 793 aa15.27■□□□□ 0.04
USE1-207ENST00000596136 GOLGA8HP0CJ92 632 aa15.27■□□□□ 0.04
USE1-207ENST00000596136 AKR1A1P14550 325 aa15.27■□□□□ 0.04
USE1-207ENST00000596136 NECTIN1Q15223 517 aa15.27■□□□□ 0.04
USE1-207ENST00000596136 MB21D2Q8IYB1 491 aaPredicted RBP15.27■□□□□ 0.04
USE1-207ENST00000596136 CLEC4DQ8WXI8 215 aa15.27■□□□□ 0.04
USE1-207ENST00000596136 MTA3Q9BTC8 594 aa15.27■□□□□ 0.04
USE1-207ENST00000596136 MAF1Q9H063 256 aa15.27■□□□□ 0.04
USE1-207ENST00000596136 KATNBL1Q9H079 304 aa15.27■□□□□ 0.04
USE1-207ENST00000596136 ABHD16BQ9H3Z7 469 aa15.27■□□□□ 0.04
USE1-207ENST00000596136 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.27■□□□□ 0.04
USE1-207ENST00000596136 LCTP09848 1927 aa15.27■□□□□ 0.03
USE1-207ENST00000596136 RANBP2P49792 3224 aaKnown RBP15.26■□□□□ 0.03
USE1-207ENST00000596136 ASTN1O14525 1302 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 LOC102724159A0A0B4J2E5 919 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 PARP1P09874 1014 aaKnown RBP15.26■□□□□ 0.03
USE1-207ENST00000596136 RARBP10826 455 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 ANTXR2P58335 489 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 ACVR2BQ13705 512 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 PWP2Q15269 919 aaKnown RBP15.26■□□□□ 0.03
USE1-207ENST00000596136 LRRC41Q15345 812 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 ARMCX2Q7L311 632 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 RALYLQ86SE5 291 aaKnown RBP15.26■□□□□ 0.03
USE1-207ENST00000596136 CCDC144CPQ8IYA2 1237 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 ADGRF4Q8IZF3 695 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 RGS22Q8NE09 1264 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 IGDCC4Q8TDY8 1250 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 MORC4Q8TE76 937 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 UBA5Q9GZZ9 404 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 FAM184BQ9ULE4 1060 aa15.26■□□□□ 0.03
USE1-207ENST00000596136 PALM3A6NDB9 673 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms