RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 STK11IPQ8N1F8 1099 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 PRPF38AQ8NAV1 312 aaKnown RBP18.9■□□□□ 0.62
USHBP1-205ENST00000595993 LENG1Q96BZ8 264 aaPredicted RBP18.9■□□□□ 0.62
USHBP1-205ENST00000595993 NUP88Q99567 741 aaPredicted RBP18.9■□□□□ 0.62
USHBP1-205ENST00000595993 NACAP1Q9BZK3 213 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 NAPBQ9H115 298 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 PPP4R2Q9NY27 417 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 SYNPO2Q9UMS6 1093 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 CNPY2Q9Y2B0 182 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 SYNRGQ9UMZ2 1314 aa18.9■□□□□ 0.62
USHBP1-205ENST00000595993 LAMA4Q16363 1823 aa18.89■□□□□ 0.61
USHBP1-205ENST00000595993 HIP1O00291 1037 aa18.89■□□□□ 0.61
USHBP1-205ENST00000595993 ACLYP53396 1101 aa18.89■□□□□ 0.61
USHBP1-205ENST00000595993 FAAP100Q0VG06 881 aa18.89■□□□□ 0.61
USHBP1-205ENST00000595993 SNRNP48Q6IEG0 339 aaKnown RBP18.89■□□□□ 0.61
USHBP1-205ENST00000595993 MKL1Q969V6 931 aa18.89■□□□□ 0.61
USHBP1-205ENST00000595993 MOXD2PA6NHM9 499 aa18.88■□□□□ 0.61
USHBP1-205ENST00000595993 HSPD1P10809 573 aaKnown RBP18.88■□□□□ 0.61
USHBP1-205ENST00000595993 CST5P28325 142 aaPredicted RBP18.88■□□□□ 0.61
USHBP1-205ENST00000595993 FGD4Q96M96 766 aa18.88■□□□□ 0.61
USHBP1-205ENST00000595993 SLC38A10Q9HBR0 1119 aa18.88■□□□□ 0.61
USHBP1-205ENST00000595993 PQBP1O60828 265 aaKnown RBP18.87■□□□□ 0.61
USHBP1-205ENST00000595993 DUSP11O75319 330 aaKnown RBP18.87■□□□□ 0.61
USHBP1-205ENST00000595993 CHMLP26374 656 aa18.87■□□□□ 0.61
USHBP1-205ENST00000595993 PPARAQ07869 468 aa18.87■□□□□ 0.61
USHBP1-205ENST00000595993 ALX1Q15699 326 aa18.87■□□□□ 0.61
USHBP1-205ENST00000595993 PLIN4Q96Q06 1357 aa18.87■□□□□ 0.61
USHBP1-205ENST00000595993 TBX21Q9UL17 535 aa18.87■□□□□ 0.61
USHBP1-205ENST00000595993 FAM184BQ9ULE4 1060 aa18.87■□□□□ 0.61
USHBP1-205ENST00000595993 ADCY6O43306 1168 aa18.86■□□□□ 0.61
USHBP1-205ENST00000595993 RAG1P15918 1043 aa18.86■□□□□ 0.61
USHBP1-205ENST00000595993 CDK7P50613 346 aa18.86■□□□□ 0.61
USHBP1-205ENST00000595993 OAZ1P54368 228 aa18.86■□□□□ 0.61
USHBP1-205ENST00000595993 NKX3-2P78367 333 aa18.86■□□□□ 0.61
USHBP1-205ENST00000595993 FPGSQ05932 587 aa18.86■□□□□ 0.61
USHBP1-205ENST00000595993 MAFAQ8NHW3 353 aaPredicted RBP18.86■□□□□ 0.61
USHBP1-205ENST00000595993 NUP133Q8WUM0 1156 aa18.86■□□□□ 0.61
USHBP1-205ENST00000595993 RNPC3Q96LT9 517 aaKnown RBP18.86■□□□□ 0.61
USHBP1-205ENST00000595993 UPF3AQ9H1J1 476 aaKnown RBP18.86■□□□□ 0.61
USHBP1-205ENST00000595993 MKNK2Q9HBH9 465 aa18.86■□□□□ 0.61
USHBP1-205ENST00000595993 STARD7Q9NQZ5 370 aa18.86■□□□□ 0.61
USHBP1-205ENST00000595993 ELP1O95163 1332 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 ZMYM6O95789 1325 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 MCM3APO60318 1980 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 RAD21O60216 631 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 PRDM1O75626 825 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 FGAP02671 866 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 CTDSPL2Q05D32 466 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 KCNA10Q16322 511 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 GMCL1P1Q8NEA9 526 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 MYLIPQ8WY64 445 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 DDX11Q96FC9 970 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 KATNBL1Q9H079 304 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 TMEM39AQ9NV64 488 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 MTMR4Q9NYA4 1195 aa18.85■□□□□ 0.61
USHBP1-205ENST00000595993 MUC3AQ02505 3323 aa18.84■□□□□ 0.61
USHBP1-205ENST00000595993 MYADML2A6NDP7 307 aa18.84■□□□□ 0.61
USHBP1-205ENST00000595993 MFAP1P55081 439 aaKnown RBP18.84■□□□□ 0.61
USHBP1-205ENST00000595993 ACVR2BQ13705 512 aa18.84■□□□□ 0.61
USHBP1-205ENST00000595993 BMP2KLQ5H9B9 411 aa18.84■□□□□ 0.61
USHBP1-205ENST00000595993 CHST13Q8NET6 341 aa18.84■□□□□ 0.61
USHBP1-205ENST00000595993 CEP95Q96GE4 821 aa18.84■□□□□ 0.61
USHBP1-205ENST00000595993 ABHD16BQ9H3Z7 469 aa18.84■□□□□ 0.61
USHBP1-205ENST00000595993 INCENPQ9NQS7 918 aa18.84■□□□□ 0.61
USHBP1-205ENST00000595993 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.84■□□□□ 0.61
USHBP1-205ENST00000595993 CLIP2Q9UDT6 1046 aa18.84■□□□□ 0.61
USHBP1-205ENST00000595993 FBXO40Q9UH90 709 aa18.84■□□□□ 0.61
USHBP1-205ENST00000595993 FEM1BQ9UK73 627 aa18.84■□□□□ 0.61
USHBP1-205ENST00000595993 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.84■□□□□ 0.61
USHBP1-205ENST00000595993 LRRC37A2A6NM11 1700 aa18.83■□□□□ 0.61
USHBP1-205ENST00000595993 RAD50Q92878 1312 aa18.83■□□□□ 0.61
USHBP1-205ENST00000595993 DCDC2CA8MYV0 355 aa18.83■□□□□ 0.6
USHBP1-205ENST00000595993 ZBED4O75132 1171 aa18.83■□□□□ 0.6
USHBP1-205ENST00000595993 TIMP1P01033 207 aa18.83■□□□□ 0.6
USHBP1-205ENST00000595993 GJA9P57773 515 aa18.83■□□□□ 0.6
USHBP1-205ENST00000595993 ZNF287Q9HBT7 754 aa18.83■□□□□ 0.6
USHBP1-205ENST00000595993 ANAPC4Q9UJX5 808 aa18.83■□□□□ 0.6
USHBP1-205ENST00000595993 ZHX1Q9UKY1 873 aaPredicted RBP18.83■□□□□ 0.6
USHBP1-205ENST00000595993 MROH7Q68CQ1 1323 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 CTAGE5O15320 804 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 TTLL1O95922 423 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 FDX1P10109 184 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 HAND2P61296 217 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 IRX5P78411 483 aaPredicted RBP18.82■□□□□ 0.6
USHBP1-205ENST00000595993 CCDC144BQ3MJ40 725 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 RASIP1Q5U651 963 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 MFSD5Q6N075 450 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 CPXCR1Q8N123 301 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 PCSK9Q8NBP7 692 aaKnown RBP18.82■□□□□ 0.6
USHBP1-205ENST00000595993 NEDD1Q8NHV4 660 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 KIFC2Q96AC6 838 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 GLT1D1Q96MS3 346 aa18.82■□□□□ 0.6
USHBP1-205ENST00000595993 RAVER2Q9HCJ3 691 aaKnown RBP18.82■□□□□ 0.6
USHBP1-205ENST00000595993 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.81■□□□□ 0.6
USHBP1-205ENST00000595993 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.81■□□□□ 0.6
USHBP1-205ENST00000595993 SGSM2O43147 1006 aa18.81■□□□□ 0.6
USHBP1-205ENST00000595993 ASGR1P07306 291 aa18.81■□□□□ 0.6
USHBP1-205ENST00000595993 FOSL2P15408 326 aa18.81■□□□□ 0.6
USHBP1-205ENST00000595993 DNAJB2P25686 324 aa18.81■□□□□ 0.6
USHBP1-205ENST00000595993 C16orf59Q7L2K0 433 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms