RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 TTBK2Q6IQ55 1244 aa18.53■□□□□ 0.56
ZNF550-207ENST00000595560 PNMA1Q8ND90 353 aa18.53■□□□□ 0.56
ZNF550-207ENST00000595560 DDX11Q96FC9 970 aa18.53■□□□□ 0.56
ZNF550-207ENST00000595560 PAWRQ96IZ0 340 aaKnown RBP18.53■□□□□ 0.56
ZNF550-207ENST00000595560 AGBL1Q96MI9 1066 aa18.53■□□□□ 0.56
ZNF550-207ENST00000595560 UBAC1Q9BSL1 405 aa18.53■□□□□ 0.56
ZNF550-207ENST00000595560 RANBP17Q9H2T7 1088 aaKnown RBP18.53■□□□□ 0.56
ZNF550-207ENST00000595560 ACAD9Q9H845 621 aa18.53■□□□□ 0.56
ZNF550-207ENST00000595560 KAT14Q9H8E8 782 aa18.53■□□□□ 0.56
ZNF550-207ENST00000595560 DDX20Q9UHI6 824 aaKnown RBP18.53■□□□□ 0.56
ZNF550-207ENST00000595560 NRBP1Q9UHY1 535 aa18.53■□□□□ 0.56
ZNF550-207ENST00000595560 MCM3APO60318 1980 aa18.52■□□□□ 0.56
ZNF550-207ENST00000595560 CNGA1P29973 690 aa18.52■□□□□ 0.56
ZNF550-207ENST00000595560 SLC16A2P36021 539 aa18.52■□□□□ 0.56
ZNF550-207ENST00000595560 TRDNQ13061 729 aa18.52■□□□□ 0.56
ZNF550-207ENST00000595560 GPATCH4Q5T3I0 446 aaKnown RBP18.52■□□□□ 0.56
ZNF550-207ENST00000595560 NECAB2Q7Z6G3 386 aa18.52■□□□□ 0.56
ZNF550-207ENST00000595560 ANKRD35Q8N283 1001 aa18.52■□□□□ 0.56
ZNF550-207ENST00000595560 MSL3Q8N5Y2 521 aaKnown RBP18.52■□□□□ 0.56
ZNF550-207ENST00000595560 DIS3LQ8TF46 1054 aaKnown RBP18.52■□□□□ 0.56
ZNF550-207ENST00000595560 TINF2Q9BSI4 451 aa18.52■□□□□ 0.56
ZNF550-207ENST00000595560 ESYT1Q9BSJ8 1104 aa18.52■□□□□ 0.56
ZNF550-207ENST00000595560 GPCPD1Q9NPB8 672 aa18.52■□□□□ 0.56
ZNF550-207ENST00000595560 HOMER2Q9NSB8 354 aa18.52■□□□□ 0.56
ZNF550-207ENST00000595560 RNF146Q9NTX7 359 aa18.52■□□□□ 0.56
ZNF550-207ENST00000595560 SEPT4O43236 478 aa18.51■□□□□ 0.55
ZNF550-207ENST00000595560 ICAM1P05362 532 aa18.51■□□□□ 0.55
ZNF550-207ENST00000595560 SNAP25P60880 206 aa18.51■□□□□ 0.55
ZNF550-207ENST00000595560 CCDC174Q6PII3 467 aa18.51■□□□□ 0.55
ZNF550-207ENST00000595560 KIAA1211Q6ZU35 1233 aa18.51■□□□□ 0.55
ZNF550-207ENST00000595560 ZNF467Q7Z7K2 595 aaPredicted RBP18.51■□□□□ 0.55
ZNF550-207ENST00000595560 RBM8AQ9Y5S9 174 aaKnown RBP18.51■□□□□ 0.55
ZNF550-207ENST00000595560 LCTP09848 1927 aa18.51■□□□□ 0.55
ZNF550-207ENST00000595560 SYNGAP1Q96PV0 1343 aa18.5■□□□□ 0.55
ZNF550-207ENST00000595560 E7EWF7 191 aa18.5■□□□□ 0.55
ZNF550-207ENST00000595560 ALAS1P13196 640 aa18.5■□□□□ 0.55
ZNF550-207ENST00000595560 SEC23AQ15436 765 aa18.5■□□□□ 0.55
ZNF550-207ENST00000595560 MAMDC4Q6UXC1 1216 aa18.5■□□□□ 0.55
ZNF550-207ENST00000595560 CYB5R4Q7L1T6 521 aa18.5■□□□□ 0.55
ZNF550-207ENST00000595560 TRERF1Q96PN7 1200 aa18.5■□□□□ 0.55
ZNF550-207ENST00000595560 LSG1Q9H089 658 aaKnown RBP18.5■□□□□ 0.55
ZNF550-207ENST00000595560 A1CFQ9NQ94 594 aaKnown RBP18.5■□□□□ 0.55
ZNF550-207ENST00000595560 CCPG1Q9ULG6 757 aa18.5■□□□□ 0.55
ZNF550-207ENST00000595560 TAF6LQ9Y6J9 622 aa18.5■□□□□ 0.55
ZNF550-207ENST00000595560 MYH6P13533 1939 aa18.5■□□□□ 0.55
ZNF550-207ENST00000595560 PFASO15067 1338 aa18.49■□□□□ 0.55
ZNF550-207ENST00000595560 ASPRV1Q53RT3 343 aa18.49■□□□□ 0.55
ZNF550-207ENST00000595560 IFIT1BQ5T764 474 aaKnown RBP18.49■□□□□ 0.55
ZNF550-207ENST00000595560 STOX1Q6ZVD7 989 aa18.49■□□□□ 0.55
ZNF550-207ENST00000595560 RALYLQ86SE5 291 aaKnown RBP18.49■□□□□ 0.55
ZNF550-207ENST00000595560 NCOA7Q8NI08 942 aa18.49■□□□□ 0.55
ZNF550-207ENST00000595560 C11orf49Q9H6J7 331 aa18.49■□□□□ 0.55
ZNF550-207ENST00000595560 PNMA2Q9UL42 364 aa18.49■□□□□ 0.55
ZNF550-207ENST00000595560 WDR19Q8NEZ3 1342 aa18.49■□□□□ 0.55
ZNF550-207ENST00000595560 PRAMEF19Q5SWL8 479 aa18.48■□□□□ 0.55
ZNF550-207ENST00000595560 DPF3Q92784 378 aa18.48■□□□□ 0.55
ZNF550-207ENST00000595560 FGD4Q96M96 766 aa18.48■□□□□ 0.55
ZNF550-207ENST00000595560 CNPY2Q9Y2B0 182 aa18.48■□□□□ 0.55
ZNF550-207ENST00000595560 LRRC37A2A6NM11 1700 aa18.47■□□□□ 0.55
ZNF550-207ENST00000595560 GOLGA8HP0CJ92 632 aa18.47■□□□□ 0.55
ZNF550-207ENST00000595560 COL6A1P12109 1028 aa18.47■□□□□ 0.55
ZNF550-207ENST00000595560 MUM1L1Q5H9M0 696 aa18.47■□□□□ 0.55
ZNF550-207ENST00000595560 FAM133AQ8N9E0 248 aa18.47■□□□□ 0.55
ZNF550-207ENST00000595560 POTEB2H3BUK9 544 aa18.46■□□□□ 0.55
ZNF550-207ENST00000595560 DNM1LO00429 736 aa18.46■□□□□ 0.55
ZNF550-207ENST00000595560 CDC45O75419 566 aa18.46■□□□□ 0.55
ZNF550-207ENST00000595560 PARP1P09874 1014 aaKnown RBP18.46■□□□□ 0.55
ZNF550-207ENST00000595560 ZNF865P0CJ78 1059 aaPredicted RBP18.46■□□□□ 0.55
ZNF550-207ENST00000595560 TAL1P17542 331 aaPredicted RBP18.46■□□□□ 0.55
ZNF550-207ENST00000595560 CNTN2Q02246 1040 aa18.46■□□□□ 0.55
ZNF550-207ENST00000595560 SART3Q15020 963 aaKnown RBP18.46■□□□□ 0.55
ZNF550-207ENST00000595560 CASC1Q6TDU7 716 aa18.46■□□□□ 0.55
ZNF550-207ENST00000595560 MB21D2Q8IYB1 491 aaPredicted RBP18.46■□□□□ 0.55
ZNF550-207ENST00000595560 ANO2Q9NQ90 1003 aa18.46■□□□□ 0.55
ZNF550-207ENST00000595560 CYP39A1Q9NYL5 469 aa18.46■□□□□ 0.55
ZNF550-207ENST00000595560 DNAH12Q6ZR08 3092 aa18.45■□□□□ 0.54
ZNF550-207ENST00000595560 ERICH2A1L162 156 aa18.45■□□□□ 0.54
ZNF550-207ENST00000595560 H0YGN5 161 aa18.45■□□□□ 0.54
ZNF550-207ENST00000595560 IFIT3O14879 490 aaKnown RBP18.45■□□□□ 0.54
ZNF550-207ENST00000595560 SNAI1O95863 264 aaPredicted RBP18.45■□□□□ 0.54
ZNF550-207ENST00000595560 ARRDC4Q8NCT1 418 aa18.45■□□□□ 0.54
ZNF550-207ENST00000595560 UBA5Q9GZZ9 404 aa18.45■□□□□ 0.54
ZNF550-207ENST00000595560 NR2E3Q9Y5X4 410 aa18.45■□□□□ 0.54
ZNF550-207ENST00000595560 SLC27A2O14975 620 aa18.44■□□□□ 0.54
ZNF550-207ENST00000595560 EVI5O60447 810 aa18.44■□□□□ 0.54
ZNF550-207ENST00000595560 RARBP10826 455 aa18.44■□□□□ 0.54
ZNF550-207ENST00000595560 AKR1A1P14550 325 aa18.44■□□□□ 0.54
ZNF550-207ENST00000595560 ANTXR2P58335 489 aa18.44■□□□□ 0.54
ZNF550-207ENST00000595560 NECTIN1Q15223 517 aa18.44■□□□□ 0.54
ZNF550-207ENST00000595560 ANO1Q5XXA6 986 aa18.44■□□□□ 0.54
ZNF550-207ENST00000595560 NSMFQ6X4W1 530 aa18.44■□□□□ 0.54
ZNF550-207ENST00000595560 ARMCX2Q7L311 632 aa18.44■□□□□ 0.54
ZNF550-207ENST00000595560 ADGRF4Q8IZF3 695 aa18.44■□□□□ 0.54
ZNF550-207ENST00000595560 CPVLQ9H3G5 476 aa18.44■□□□□ 0.54
ZNF550-207ENST00000595560 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.44■□□□□ 0.54
ZNF550-207ENST00000595560 SOWAHBA6NEL2 793 aa18.43■□□□□ 0.54
ZNF550-207ENST00000595560 NFIBO00712 420 aa18.43■□□□□ 0.54
ZNF550-207ENST00000595560 WTAPQ15007 396 aa18.43■□□□□ 0.54
ZNF550-207ENST00000595560 CDC37Q16543 378 aaPredicted RBP18.43■□□□□ 0.54
ZNF550-207ENST00000595560 ERICH6BQ5W0A0 696 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms