RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TOX2Q96NM4 488 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 NAPBQ9H115 298 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 HOMER2Q9NSB8 354 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 FBXO40Q9UH90 709 aa19.47■□□□□ 0.71
LIG1-205ENST00000593425 DCDC2CA8MYV0 355 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 TMEM232C9JQI7 657 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 TFAP4Q01664 338 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 PDE4BQ07343 736 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 PPARAQ07869 468 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 LRRFIP1Q32MZ4 808 aaKnown RBP19.46■□□□□ 0.71
LIG1-205ENST00000593425 CCDC144BQ3MJ40 725 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 ZMYM1Q5SVZ6 1142 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 CHMP4CQ96CF2 233 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 FSD1Q9BTV5 496 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 NACAP1Q9BZK3 213 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 KATNBL1Q9H079 304 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 ABHD16BQ9H3Z7 469 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 PCDHB15Q9Y5E8 787 aa19.46■□□□□ 0.71
LIG1-205ENST00000593425 LCTP09848 1927 aa19.45■□□□□ 0.7
LIG1-205ENST00000593425 FOXP2O15409 715 aa19.45■□□□□ 0.7
LIG1-205ENST00000593425 ASGR1P07306 291 aa19.45■□□□□ 0.7
LIG1-205ENST00000593425 CNTN2Q02246 1040 aa19.45■□□□□ 0.7
LIG1-205ENST00000593425 RASGRP2Q7LDG7 609 aa19.45■□□□□ 0.7
LIG1-205ENST00000593425 CCDC144CPQ8IYA2 1237 aa19.45■□□□□ 0.7
LIG1-205ENST00000593425 UPF3AQ9H1J1 476 aaKnown RBP19.45■□□□□ 0.7
LIG1-205ENST00000593425 TBX21Q9UL17 535 aa19.45■□□□□ 0.7
LIG1-205ENST00000593425 ISY1Q9ULR0 285 aaKnown RBP19.45■□□□□ 0.7
LIG1-205ENST00000593425 ZNF536O15090 1300 aa19.45■□□□□ 0.7
LIG1-205ENST00000593425 EYSQ5T1H1 3165 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 ERC2O15083 957 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 CTAGE5O15320 804 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 CDK7P50613 346 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 STAT2P52630 851 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 GJA9P57773 515 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 CCDC129Q6ZRS4 1044 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 FAM133AQ8N9E0 248 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 MAFAQ8NHW3 353 aaPredicted RBP19.44■□□□□ 0.7
LIG1-205ENST00000593425 AGBL1Q96MI9 1066 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 GLT1D1Q96MS3 346 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 ACAD9Q9H845 621 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 ELP1O95163 1332 aa19.44■□□□□ 0.7
LIG1-205ENST00000593425 CDH23Q9H251 3354 aa19.43■□□□□ 0.7
LIG1-205ENST00000593425 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.43■□□□□ 0.7
LIG1-205ENST00000593425 TIMP1P01033 207 aa19.43■□□□□ 0.7
LIG1-205ENST00000593425 PCSK9Q8NBP7 692 aaKnown RBP19.43■□□□□ 0.7
LIG1-205ENST00000593425 GMCL1Q96IK5 515 aa19.43■□□□□ 0.7
LIG1-205ENST00000593425 A1CFQ9NQ94 594 aaKnown RBP19.43■□□□□ 0.7
LIG1-205ENST00000593425 INCENPQ9NQS7 918 aa19.43■□□□□ 0.7
LIG1-205ENST00000593425 RNF146Q9NTX7 359 aa19.43■□□□□ 0.7
LIG1-205ENST00000593425 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.43■□□□□ 0.7
LIG1-205ENST00000593425 SOWAHBA6NEL2 793 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 SLC3A2P08195 630 aaKnown RBP19.42■□□□□ 0.7
LIG1-205ENST00000593425 FDX1P10109 184 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 MCCP23508 829 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 SLC1A4P43007 532 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 CTDSPL2Q05D32 466 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 GNASQ5JWF2 1037 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 KCTD1Q719H9 257 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 FAM160B2Q86V87 743 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 STAG1Q8WVM7 1258 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.42■□□□□ 0.77e-7■■■■□ 24.8
LIG1-205ENST00000593425 SPC25Q9HBM1 224 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 IL17RBQ9NRM6 502 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 DDX49Q9Y6V7 483 aaKnown RBP19.42■□□□□ 0.7
LIG1-205ENST00000593425 ASTN1O14525 1302 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 MROH7Q68CQ1 1323 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 SALL3Q9BXA9 1300 aa19.42■□□□□ 0.7
LIG1-205ENST00000593425 TMEM265A0A087WTH1 108 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 A0A0U1RQG5 324 aaPredicted RBP19.41■□□□□ 0.7
LIG1-205ENST00000593425 ARVCFO00192 962 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 NMT2O60551 498 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 FOSL2P15408 326 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 MX1P20591 662 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 PTGS1P23219 599 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 SNAP25P60880 206 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 BEX3Q00994 111 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 IKQ13123 557 aaPredicted RBP19.41■□□□□ 0.7
LIG1-205ENST00000593425 MFSD5Q6N075 450 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 FAM126BQ8IXS8 530 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 CHURC1Q8WUH1 139 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 VTI1AQ96AJ9 217 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 STX8Q9UNK0 236 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 A0A0C4DFX4 3053 aa19.41■□□□□ 0.7
LIG1-205ENST00000593425 TSPY2A6NKD2 308 aa19.4■□□□□ 0.7
LIG1-205ENST00000593425 ALAS1P13196 640 aa19.4■□□□□ 0.7
LIG1-205ENST00000593425 DNAJB2P25686 324 aa19.4■□□□□ 0.7
LIG1-205ENST00000593425 NKX3-2P78367 333 aa19.4■□□□□ 0.7
LIG1-205ENST00000593425 VPS53Q5VIR6 699 aa19.4■□□□□ 0.7
LIG1-205ENST00000593425 CCDC174Q6PII3 467 aa19.4■□□□□ 0.7
LIG1-205ENST00000593425 C16orf59Q7L2K0 433 aa19.4■□□□□ 0.7
LIG1-205ENST00000593425 TRERF1Q96PN7 1200 aa19.4■□□□□ 0.7
LIG1-205ENST00000593425 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.39■□□□□ 0.69
LIG1-205ENST00000593425 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.39■□□□□ 0.69
LIG1-205ENST00000593425 PLA2G6O60733 806 aa19.39■□□□□ 0.69
LIG1-205ENST00000593425 TNFAIP2Q03169 654 aa19.39■□□□□ 0.69
LIG1-205ENST00000593425 TKFCQ3LXA3 575 aa19.39■□□□□ 0.69
LIG1-205ENST00000593425 MUM1L1Q5H9M0 696 aa19.39■□□□□ 0.69
LIG1-205ENST00000593425 PPP1R12CQ9BZL4 782 aa19.39■□□□□ 0.69
LIG1-205ENST00000593425 PRR12Q9ULL5 1215 aa19.39■□□□□ 0.69
LIG1-205ENST00000593425 GNEQ9Y223 722 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms