RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CSADQ9Y600 493 aa15.52■□□□□ 0.08
VMP1-217ENST00000593168 SNCAIPQ9Y6H5 919 aa15.52■□□□□ 0.08
VMP1-217ENST00000593168 BAZ2BQ9UIF8 2168 aaKnown RBP15.52■□□□□ 0.07
VMP1-217ENST00000593168 FRMPD2Q68DX3 1309 aaPredicted RBP15.51■□□□□ 0.07
VMP1-217ENST00000593168 H0YGN5 161 aa15.51■□□□□ 0.07
VMP1-217ENST00000593168 MMP1P03956 469 aa15.51■□□□□ 0.07
VMP1-217ENST00000593168 SAFBQ15424 915 aaKnown RBP eCLIP15.51■□□□□ 0.07
VMP1-217ENST00000593168 CCDC96Q2M329 555 aa15.51■□□□□ 0.07
VMP1-217ENST00000593168 ATL3Q6DD88 541 aa15.51■□□□□ 0.07
VMP1-217ENST00000593168 SCYL3Q8IZE3 742 aa15.51■□□□□ 0.07
VMP1-217ENST00000593168 RRP36Q96EU6 259 aaKnown RBP15.51■□□□□ 0.07
VMP1-217ENST00000593168 UBA5Q9GZZ9 404 aa15.51■□□□□ 0.07
VMP1-217ENST00000593168 GPCPD1Q9NPB8 672 aa15.51■□□□□ 0.07
VMP1-217ENST00000593168 SZT2Q5T011 3432 aa15.51■□□□□ 0.07
VMP1-217ENST00000593168 hCG_1642624A0A1W2PR95 340 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 SPDYE5A6NIY4 337 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 TLR2O60603 784 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 BMP3P12645 472 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 U2AF2P26368 475 aaKnown RBP eCLIP15.5■□□□□ 0.07
VMP1-217ENST00000593168 INPP5BP32019 993 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 KRT85P78386 507 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 LACTBP83111 547 aaPredicted RBP15.5■□□□□ 0.07
VMP1-217ENST00000593168 NOL9Q5SY16 702 aaKnown RBP15.5■□□□□ 0.07
VMP1-217ENST00000593168 MTMR8Q96EF0 704 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 WRNIP1Q96S55 665 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 WDR18Q9BV38 432 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 PHF20Q9BVI0 1012 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 FOXP1Q9H334 677 aaPredicted RBP15.5■□□□□ 0.07
VMP1-217ENST00000593168 VCPKMTQ9H867 229 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 ATAD5Q96QE3 1844 aa15.5■□□□□ 0.07
VMP1-217ENST00000593168 BTBD19C9JJ37 291 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 hCG_1984214I3L0E3 225 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 DNM1Q05193 864 aaKnown RBP15.49■□□□□ 0.07
VMP1-217ENST00000593168 CSPP1Q1MSJ5 1256 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 FOXD4L6Q3SYB3 417 aaPredicted RBP15.49■□□□□ 0.07
VMP1-217ENST00000593168 TTBK2Q6IQ55 1244 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 BTNL9Q6UXG8 535 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 FOXD4L3Q6VB84 417 aaPredicted RBP15.49■□□□□ 0.07
VMP1-217ENST00000593168 KCTD1Q719H9 257 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 ZNF713Q8N859 430 aaPredicted RBP15.49■□□□□ 0.07
VMP1-217ENST00000593168 TMEM87AQ8NBN3 555 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 ZKSCAN4Q969J2 545 aaPredicted RBP15.49■□□□□ 0.07
VMP1-217ENST00000593168 SHISA4Q96DD7 197 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 CHAMP1Q96JM3 812 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 KIAA1683Q9H0B3 1180 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 CPVLQ9H3G5 476 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 JMJD4Q9H9V9 463 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 AS3MTQ9HBK9 375 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 VAT1LQ9HCJ6 419 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 PICK1Q9NRD5 415 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 VPS54Q9P1Q0 977 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 SEC63Q9UGP8 760 aaKnown RBP15.49■□□□□ 0.07
VMP1-217ENST00000593168 KCNJ14Q9UNX9 436 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 CEP290O15078 2479 aa15.49■□□□□ 0.07
VMP1-217ENST00000593168 IRF6O14896 467 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 RAD21O60216 631 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 PLA2G6O60733 806 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 ECM2O94769 699 aaPredicted RBP15.48■□□□□ 0.07
VMP1-217ENST00000593168 CETPP11597 493 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 CALML3P27482 149 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 CTGFP29279 349 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 KIF22Q14807 665 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 GALNT17Q6IS24 598 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 FAM173BQ6P4H8 233 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 ERO1BQ86YB8 467 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 DIS3L2Q8IYB7 885 aaKnown RBP15.48■□□□□ 0.07
VMP1-217ENST00000593168 ADGRF4Q8IZF3 695 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 CCDC12Q8WUD4 166 aaPredicted RBP15.48■□□□□ 0.07
VMP1-217ENST00000593168 PIBF1Q8WXW3 757 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 ZNF396Q96N95 335 aaPredicted RBP15.48■□□□□ 0.07
VMP1-217ENST00000593168 PIGSQ96S52 555 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 SCAND2PQ9GZW5 306 aaPredicted RBP15.48■□□□□ 0.07
VMP1-217ENST00000593168 LMBRD1Q9NUN5 540 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 CFAP45Q9UL16 551 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 CNPY2Q9Y2B0 182 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 TCHHQ07283 1943 aa15.48■□□□□ 0.07
VMP1-217ENST00000593168 PNMA6FA0A0J9YX94 578 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 BTBD18B2RXH4 712 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 KIF28PB7ZC32 967 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 PTPRAP18433 802 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 NLRP5P59047 1200 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 GNL2Q13823 731 aaKnown RBP15.47■□□□□ 0.07
VMP1-217ENST00000593168 DOCK1Q14185 1865 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 NBR1Q14596 966 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 MTFR1Q15390 333 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 WWC2Q6AWC2 1192 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 HOMER1Q86YM7 354 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 CCDC148Q8NFR7 591 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 LPAR1Q92633 364 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 BRMS1Q9HCU9 246 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 ZCCHC17Q9NP64 241 aaKnown RBP15.47■□□□□ 0.07
VMP1-217ENST00000593168 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.47■□□□□ 0.07
VMP1-217ENST00000593168 TRIOBPQ9H2D6 2365 aa15.47■□□□□ 0.07
VMP1-217ENST00000593168 TMEM232C9JQI7 657 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 STXBP3O00186 592 aa15.46■□□□□ 0.07
VMP1-217ENST00000593168 PRPF40AO75400 957 aaKnown RBP15.46■□□□□ 0.07
VMP1-217ENST00000593168 NCLP19338 710 aaKnown RBP15.46■□□□□ 0.07
VMP1-217ENST00000593168 KRT2P35908 639 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms